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PMC:1064873 / 3435-3733 JSONTXT

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biosemtest

Id Subject Object Predicate Lexical cue
T3067 211-216 UMLS/C1136359 denotes cells
T3061 211-216 UMLS/C1948049 denotes cells
T3059 4-24 UMLS/C0003873 denotes rheumatoid arthritis
T3050 108-119 UMLS/C2697913 denotes lymphocytes
T3044 108-119 UMLS/C0200635 denotes lymphocytes
T3031 211-216 UMLS/C1704653 denotes cells
T2980 211-216 UMLS/C1269647 denotes cells
T2832 206-210 UMLS/C0870814 denotes like
T2811 195-205 UMLS/C1546634 denotes fibroblast
T2786 281-292 UMLS/C1550652 denotes macrophages
T2785 121-132 UMLS/C1550652 denotes macrophages
T2782 108-119 UMLS/C1550651 denotes lymphocytes
T2776 53-63 UMLS/C1549537 denotes infiltrate
T2767 69-76 UMLS/C2346866 denotes variety
T2763 195-205 UMLS/C1550637 denotes fibroblast
T2761 53-63 UMLS/C0332448 denotes infiltrate
T2757 80-98 UMLS/C0440752 denotes inflammatory cells
T3192 281-292 UMLS/C0024432 denotes macrophages
T3191 121-132 UMLS/C0024432 denotes macrophages
T3186 211-216 UMLS/C0007634 denotes cells
T3181 186-194 UMLS/C1550315 denotes synovial
T3162 108-119 UMLS/C0024264 denotes lymphocytes
T3143 218-226 UMLS/C0439064 denotes Numerous
T3137 33-46 UMLS/C1880022 denotes characterized
T2852 261-275 UMLS/C0574941 denotes inflamed joint
T2846 195-205 UMLS/C0016030 denotes fibroblast
T2575 155-163 UMLS/C1883357 denotes together
T2564 227-236 UMLS/C1524094 denotes cytokines
T2557 53-63 UMLS/C1546677 denotes infiltrate
T2497 69-76 UMLS/C1883525 denotes variety
T2482 169-182 UMLS/C0334094 denotes proliferation
T2434 227-236 UMLS/C0079189 denotes cytokines
T2613 281-292 UMLS/C1546706 denotes macrophages
T2612 121-132 UMLS/C1546706 denotes macrophages
T2610 108-119 UMLS/C1546705 denotes lymphocytes
T2604 138-153 UMLS/C0011306 denotes dendritic cells

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4268 293-296 CC denotes and
T4267 281-292 NN denotes macrophages
T4266 277-280 CC denotes and
T4265 275-276 -COMMA- denotes ,
T4264 270-275 NN denotes joint
T4263 261-269 JJ denotes inflamed
T4262 257-260 DT denotes the
T4261 254-256 IN denotes in
T4260 241-253 VB denotes overproduced
T4259 237-240 VB denotes are
T4258 227-236 NN denotes cytokines
T4257 218-226 JJ denotes Numerous
T4256 211-216 NN denotes cells
T4255 195-210 JJ denotes fibroblast-like
T4254 186-194 JJ denotes synovial
T4253 183-185 IN denotes of
T4252 169-182 NN denotes proliferation
T4251 164-168 IN denotes with
T4250 155-163 RB denotes together
T4249 153-154 -COMMA- denotes ,
T4248 148-153 NN denotes cells
T4247 138-147 JJ denotes dendritic
T4246 134-137 CC denotes and
T4245 132-133 -COMMA- denotes ,
T4244 121-132 NN denotes macrophages
T4243 119-120 -COMMA- denotes ,
T4242 108-119 NN denotes lymphocytes
T4241 105-107 IN denotes as
T4240 100-104 JJ denotes such
T4239 98-99 -COMMA- denotes ,
T4238 93-98 NN denotes cells
T4237 80-92 JJ denotes inflammatory
T4236 77-79 IN denotes of
T4235 69-76 NN denotes variety
T4234 67-68 DT denotes a
T4233 64-66 IN denotes of
T4232 53-63 NN denotes infiltrate
T4231 50-52 DT denotes an
T4230 47-49 IN denotes by
T4229 33-46 VB denotes characterized
T4228 30-32 VB denotes is
T4227 28-29 -RRB- denotes )
T4226 26-28 NN denotes RA
T4225 25-26 -LRB- denotes (
T4224 15-24 NN denotes arthritis
T4223 4-14 JJ denotes rheumatoid
T4222 1-3 IN denotes of
R1286 T4224 T4222 arg2Of arthritis,of
R1287 T4224 T4223 arg1Of arthritis,rheumatoid
R1288 T4224 T4225 arg1Of arthritis,(
R1290 T4226 T4225 arg2Of RA,(
R1291 T4227 T4225 arg3Of ),(
R1293 T4229 T4228 arg2Of characterized,is
R1295 T4232 T4229 arg1Of infiltrate,characterized
R1296 T4232 T4230 arg2Of infiltrate,by
R1297 T4232 T4231 arg1Of infiltrate,an
R1298 T4232 T4233 arg1Of infiltrate,of
R1300 T4235 T4233 arg2Of variety,of
R1301 T4235 T4234 arg1Of variety,a
R1302 T4235 T4236 arg1Of variety,of
R1304 T4238 T4236 arg2Of cells,of
R1305 T4238 T4237 arg1Of cells,inflammatory
R1306 T4238 T4239 arg1Of cells,","
R1307 T4238 T4241 arg1Of cells,as
R1308 T4241 T4240 arg1Of as,such
R1310 T4242 T4243 arg1Of lymphocytes,","
R1313 T4243 T4246 arg1Of ",",and
R1315 T4244 T4243 arg2Of macrophages,","
R1317 T4246 T4241 arg2Of and,as
R1318 T4246 T4245 arg1Of and,","
R1319 T4246 T4249 arg1Of and,","
R1320 T4246 T4251 arg1Of and,with
R1322 T4248 T4246 arg2Of cells,and
R1323 T4248 T4247 arg1Of cells,dendritic
R1324 T4251 T4250 arg1Of with,together
R1326 T4252 T4251 arg2Of proliferation,with
R1327 T4252 T4253 arg1Of proliferation,of
R1329 T4256 T4253 arg2Of cells,of
R1330 T4256 T4254 arg1Of cells,synovial
R1331 T4256 T4255 arg1Of cells,fibroblast-like
R1334 T4258 T4257 arg1Of cytokines,Numerous
R1335 T4258 T4259 arg1Of cytokines,are
R1336 T4258 T4260 arg2Of cytokines,overproduced
R1337 T4260 T4259 arg2Of overproduced,are
R1338 T4260 T4261 arg1Of overproduced,in
R1339 T4260 T4266 arg1Of overproduced,and
R1342 T4264 T4261 arg2Of joint,in
R1343 T4264 T4262 arg1Of joint,the
R1344 T4264 T4263 arg1Of joint,inflamed
R1345 T4266 T4265 arg1Of and,","
R1347 T4267 T4268 arg1Of macrophages,and

ICD10

Id Subject Object Predicate Lexical cue
T3599 15-24 http://purl.bioontology.org/ontology/ICD10/M13.9 denotes arthritis
T3598 4-24 http://purl.bioontology.org/ontology/ICD10/M06.9 denotes rheumatoid arthritis

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T6182 195-216 Entity denotes fibroblast-like cells
T6164 26-28 Protein denotes RA
T6237 138-153 Entity denotes dendritic cells
T6235 218-236 Protein denotes Numerous cytokines
T6212 77-98 Entity denotes of inflammatory cells
T6202 195-216 Entity denotes fibroblast-like cells
T6296 206-216 Entity denotes like cells
T6287 108-119 Entity denotes lymphocytes
T6327 281-292 Entity denotes macrophages
T6315 121-132 Entity denotes macrophages
T6359 218-275 Gene_expression denotes Numerous cytokines are overproduced in the inflamed joint
T6358 218-275 Positive_regulation denotes Numerous cytokines are overproduced in the inflamed joint
R3121 T6235 T6358 themeOf Numerous cytokines,Numerous cytokines are overproduced in the inflamed joint
R3122 T6235 T6359 themeOf Numerous cytokines,Numerous cytokines are overproduced in the inflamed joint

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5253 293-296 CC denotes and
T5252 281-292 NNS denotes macrophages
T5251 277-280 CC denotes and
T5250 275-276 , denotes ,
T5249 270-275 NN denotes joint
T5248 261-269 JJ denotes inflamed
T5247 257-260 DT denotes the
T5246 254-256 IN denotes in
T5245 241-253 VBN denotes overproduced
T5244 237-240 VBP denotes are
T5243 227-236 NNS denotes cytokines
T5242 218-226 JJ denotes Numerous
T5241 216-217 . denotes .
T5240 211-216 NNS denotes cells
T5239 195-210 JJ denotes fibroblast-like
T5238 186-194 JJ denotes synovial
T5237 183-185 IN denotes of
T5236 169-182 NN denotes proliferation
T5235 164-168 IN denotes with
T5234 155-163 RB denotes together
T5233 153-154 , denotes ,
T5232 148-153 NNS denotes cells
T5231 138-147 JJ denotes dendritic
T5230 134-137 CC denotes and
T5229 132-133 , denotes ,
T5228 121-132 NNS denotes macrophages
T5227 119-120 , denotes ,
T5226 108-119 NNS denotes lymphocytes
T5225 105-107 IN denotes as
T5224 100-104 JJ denotes such
T5223 98-99 , denotes ,
T5222 93-98 NNS denotes cells
T5221 80-92 JJ denotes inflammatory
T5220 77-79 IN denotes of
T5219 69-76 NN denotes variety
T5218 67-68 DT denotes a
T5217 64-66 IN denotes of
T5216 53-63 VB denotes infiltrate
T5215 50-52 DT denotes an
T5214 47-49 IN denotes by
T5213 33-46 VBN denotes characterized
T5212 30-32 VBZ denotes is
T5211 28-29 -RRB- denotes )
T5210 26-28 NNP denotes RA
T5209 25-26 -LRB- denotes (
T5208 15-24 NNS denotes arthritis
T5207 4-14 JJ denotes rheumatoid
T5206 1-3 IN denotes of
R2320 T5207 T5208 amod rheumatoid,arthritis
R2321 T5208 T5206 pobj arthritis,of
R2325 T5209 T5210 punct (,RA
R2330 T5210 T5208 appos RA,arthritis
R2338 T5212 T5213 auxpass is,characterized
R2342 T5213 T5213 ROOT characterized,characterized
R2345 T5214 T5213 agent by,characterized
R2349 T5215 T5216 det an,infiltrate
R2354 T5216 T5214 pobj infiltrate,by
R2357 T5217 T5216 prep of,infiltrate
R2361 T5218 T5219 det a,variety
R2365 T5219 T5217 pobj variety,of
R2368 T5220 T5219 prep of,variety
R2369 T5221 T5222 amod inflammatory,cells
R2372 T5222 T5220 pobj cells,of
R2376 T5223 T5222 punct ",",cells
R2380 T5224 T5225 amod such,as
R2383 T5225 T5222 prep as,cells
R2387 T5226 T5225 pobj lymphocytes,as
R2391 T5227 T5226 punct ",",lymphocytes
R2393 T5228 T5226 conj macrophages,lymphocytes
R2397 T5229 T5228 punct ",",macrophages
R2401 T5230 T5228 cc and,macrophages
R2405 T5231 T5232 amod dendritic,cells
R2409 T5232 T5228 conj cells,macrophages
R2413 T5233 T5216 punct ",",infiltrate
R2417 T5234 T5235 advmod together,with
R2420 T5235 T5216 prep with,infiltrate
R2425 T5236 T5235 pobj proliferation,with
R2428 T5237 T5236 prep of,proliferation
R2436 T5238 T5240 amod synovial,cells
R2437 T5239 T5240 amod fibroblast-like,cells
R2441 T5240 T5237 pobj cells,of
R2444 T5241 T5213 punct .,characterized
R2448 T5242 T5243 amod Numerous,cytokines
R2450 T5243 T5245 nsubjpass cytokines,overproduced
R2451 T5244 T5245 auxpass are,overproduced
R2454 T5245 T5245 ROOT overproduced,overproduced
R2458 T5246 T5245 prep in,overproduced
R2461 T5247 T5249 det the,joint
R2464 T5248 T5249 amod inflamed,joint
R2466 T5249 T5246 pobj joint,in
R2470 T5250 T5245 punct ",",overproduced
R2475 T5251 T5245 cc and,overproduced
R2486 T5253 T5252 cc and,macrophages