PMC:1064873 / 3414-4401
Annnotations
LappsTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2212 | 721-725 | Protein | denotes | IL-6 |
| T2211 | 655-671 | Protein | denotes | matrix proteases |
| T2210 | 639-653 | Protein | denotes | growth factors |
| T2209 | 433-437 | Protein | denotes | IL-1 |
| T2208 | 393-420 | Protein | denotes | Tumor necrosis factor alpha |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 15535835-8717520-4156871 | 716-718 | 8717520 | denotes | 10 |
| 15535835-12746890-4156872 | 983-985 | 12746890 | denotes | 11 |
biosemtest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3103 | 663-672 | UP/P10270 | denotes | roteases, |
| T3096 | 526-531 | UMLS/C1706309 | denotes | oint |
| T3095 | 640-654 | UP/Q776B5 | denotes | rowth factors, |
| T3089 | 640-654 | UP/P08441 | denotes | rowth factors, |
| T3082 | 526-531 | UMLS/C0022417 | denotes | oint |
| T3081 | 576-586 | UMLS/C1705248 | denotes | omponents, |
| T3078 | 663-672 | UP/P07570 | denotes | roteases, |
| T3077 | 490-497 | UMLS/C1709694 | denotes | rocess |
| T3067 | 232-237 | UMLS/C1136359 | denotes | cells |
| T3061 | 232-237 | UMLS/C1948049 | denotes | cells |
| T3059 | 25-45 | UMLS/C0003873 | denotes | rheumatoid arthritis |
| T3057 | 532-543 | UMLS/C1948029 | denotes | estruction, |
| T3050 | 129-140 | UMLS/C2697913 | denotes | lymphocytes |
| T3049 | 640-654 | UP/P01136 | denotes | rowth factors, |
| T3044 | 129-140 | UMLS/C0200635 | denotes | lymphocytes |
| T3042 | 663-672 | UP/P63122 | denotes | roteases, |
| T3038 | 663-672 | UP/P63124 | denotes | roteases, |
| T3032 | 554-558 | UMLS/C1947971 | denotes | ive |
| T3031 | 232-237 | UMLS/C1704653 | denotes | cells |
| T3023 | 532-543 | UMLS/C1261381 | denotes | estruction, |
| T3021 | 526-531 | UMLS/C0392905 | denotes | oint |
| T3018 | 656-662 | UMLS/C1704639 | denotes | atrix |
| T3017 | 656-662 | UMLS/C1704640 | denotes | atrix |
| T3015 | 526-531 | UMLS/C1269611 | denotes | oint |
| T3003 | 826-833 | UMLS/C0441472 | denotes | ctions |
| T2997 | 598-603 | UMLS/C1955473 | denotes | ther |
| T2994 | 663-672 | UMLS/C1947941 | denotes | roteases, |
| T2989 | 444-449 | UMLS/C0205164 | denotes | ajor |
| T2983 | 663-672 | UP/P63121 | denotes | roteases, |
| T2980 | 232-237 | UMLS/C1269647 | denotes | cells |
| T2958 | 640-654 | UMLS/C0018284 | denotes | rowth factors, |
| T2957 | 490-497 | UMLS/C1522240 | denotes | rocess |
| T2951 | 576-586 | UMLS/C1179435 | denotes | omponents, |
| T2947 | 640-654 | UP/P33804 | denotes | rowth factors, |
| T2941 | 604-616 | UMLS/C0333348 | denotes | nflammatory |
| T2936 | 576-586 | UMLS/C0729650 | denotes | omponents, |
| T2924 | 490-497 | UMLS/C1551390 | denotes | rocess |
| T2899 | 663-672 | UP/Q9BXR3 | denotes | roteases, |
| T2833 | 857-877 | UMLS/C0001349 | denotes | cute-phase response, |
| T2832 | 227-231 | UMLS/C0870814 | denotes | like |
| T2829 | 692-715 | UMLS/C0162772 | denotes | eactive oxygen species |
| T2813 | 789-800 | UMLS/C1546634 | denotes | ibroblasts, |
| T2812 | 327-338 | UMLS/C1546634 | denotes | fibroblasts |
| T2811 | 216-226 | UMLS/C1546634 | denotes | fibroblast |
| T2809 | 663-672 | UP/P04024 | denotes | roteases, |
| T2808 | 663-672 | UP/P63129 | denotes | roteases, |
| T2805 | 440-443 | UMLS/C0205448 | denotes | wo |
| T2798 | 501-521 | UMLS/C0021376 | denotes | hronic inflammation |
| T2793 | 902-914 | UMLS/C0032112 | denotes | lasma cells, |
| T2792 | 674-686 | UMLS/C0028128 | denotes | itric oxide, |
| T2786 | 302-313 | UMLS/C1550652 | denotes | macrophages |
| T2785 | 142-153 | UMLS/C1550652 | denotes | macrophages |
| T2782 | 129-140 | UMLS/C1550651 | denotes | lymphocytes |
| T2780 | 834-841 | UMLS/C1552866 | denotes | nclude |
| T2779 | 588-597 | UMLS/C1552866 | denotes | ncluding |
| T2778 | 640-654 | UP/Q86607 | denotes | rowth factors, |
| T2776 | 74-84 | UMLS/C1549537 | denotes | infiltrate |
| T2767 | 90-97 | UMLS/C2346866 | denotes | variety |
| T2765 | 789-800 | UMLS/C1550637 | denotes | ibroblasts, |
| T2764 | 327-338 | UMLS/C1550637 | denotes | fibroblasts |
| T2763 | 216-226 | UMLS/C1550637 | denotes | fibroblast |
| T2762 | 640-654 | UP/Q8V307 | denotes | rowth factors, |
| T2761 | 74-84 | UMLS/C0332448 | denotes | infiltrate |
| T2757 | 101-119 | UMLS/C0440752 | denotes | inflammatory cells |
| T2752 | 842-852 | UMLS/C0284447 | denotes | imulating |
| T2745 | 393-420 | UMLS/C1456820 | denotes | Tumor necrosis factor alpha |
| T2741 | 663-672 | UP/P63127 | denotes | roteases, |
| T2718 | 554-558 | UMLS/C1550718 | denotes | ive |
| T2709 | 434-438 | UMLS/C1522428 | denotes | L-1, |
| T2704 | 663-672 | UP/P63125 | denotes | roteases, |
| T2697 | 434-438 | UMLS/C1149212 | denotes | L-1, |
| T2681 | 663-672 | UP/P21407 | denotes | roteases, |
| T2672 | 663-672 | UP/P63131 | denotes | roteases, |
| T2668 | 559-563 | UMLS/C0035853 | denotes | ise |
| T2667 | 722-726 | UMLS/C1149241 | denotes | L-6 |
| T3227 | 526-531 | UMLS/C0444497 | denotes | oint |
| T3217 | 962-982 | UMLS/C0007589 | denotes | ell differentiation |
| T3216 | 663-672 | UMLS/C0030940 | denotes | roteases, |
| T3212 | 663-672 | UMLS/C0030946 | denotes | roteases, |
| T3211 | 490-497 | UMLS/C1184743 | denotes | rocess |
| T3192 | 302-313 | UMLS/C0024432 | denotes | macrophages |
| T3191 | 142-153 | UMLS/C0024432 | denotes | macrophages |
| T3186 | 232-237 | UMLS/C0007634 | denotes | cells |
| T3184 | 628-638 | UMLS/C0282554 | denotes | hemokines, |
| T3182 | 318-326 | UMLS/C1550315 | denotes | synovial |
| T3181 | 207-215 | UMLS/C1550315 | denotes | synovial |
| T3168 | 656-662 | UMLS/C1706515 | denotes | atrix |
| T3162 | 129-140 | UMLS/C0024264 | denotes | lymphocytes |
| T3148 | 450-469 | UMLS/C0598896 | denotes | acrophage products, |
| T3146 | 4-21 | UMLS/C0039099 | denotes | synovial membrane |
| T3143 | 239-247 | UMLS/C0439064 | denotes | Numerous |
| T3140 | 554-558 | UMLS/C1442162 | denotes | ive |
| T3139 | 628-638 | UMLS/C1527036 | denotes | hemokines, |
| T3137 | 54-67 | UMLS/C1880022 | denotes | characterized |
| T3135 | 923-932 | UMLS/C1705273 | denotes | unctions, |
| T3120 | 916-922 | UMLS/C0039194 | denotes | -cell |
| T3115 | 923-932 | UMLS/C0542341 | denotes | unctions, |
| T2653 | 663-672 | UP/P63120 | denotes | roteases, |
| T2646 | 663-672 | UP/P51518 | denotes | roteases, |
| T2640 | 779-788 | UMLS/C1879547 | denotes | ctivated |
| T2636 | 663-672 | UP/P10265 | denotes | roteases, |
| T2628 | 490-497 | UMLS/C1550044 | denotes | rocess |
| T2626 | 722-726 | UMLS/C1527132 | denotes | L-6 |
| T2889 | 834-841 | UMLS/C0332257 | denotes | nclude |
| T2888 | 588-597 | UMLS/C0332257 | denotes | ncluding |
| T2872 | 834-841 | UMLS/C2700399 | denotes | nclude |
| T2871 | 588-597 | UMLS/C2700399 | denotes | ncluding |
| T2865 | 879-885 | UMLS/C0004561 | denotes | -cell |
| T2863 | 576-586 | UMLS/C0449432 | denotes | omponents, |
| T2855 | 663-672 | UP/P10271 | denotes | roteases, |
| T2854 | 663-672 | UP/P63119 | denotes | roteases, |
| T2852 | 282-296 | UMLS/C0574941 | denotes | inflamed joint |
| T2848 | 789-800 | UMLS/C0016030 | denotes | ibroblasts, |
| T2847 | 327-338 | UMLS/C0016030 | denotes | fibroblasts |
| T2846 | 216-226 | UMLS/C0016030 | denotes | fibroblast |
| T2575 | 176-184 | UMLS/C1883357 | denotes | together |
| T2567 | 744-752 | UMLS/C1524094 | denotes | ytokine |
| T2566 | 617-626 | UMLS/C1524094 | denotes | ytokines, |
| T2565 | 382-391 | UMLS/C1524094 | denotes | cytokines |
| T2564 | 248-257 | UMLS/C1524094 | denotes | cytokines |
| T2557 | 74-84 | UMLS/C1546677 | denotes | infiltrate |
| T2556 | 722-726 | UMLS/C0021760 | denotes | L-6 |
| T2549 | 663-672 | UP/P63123 | denotes | roteases, |
| T2543 | 722-726 | UMLS/C1334122 | denotes | L-6 |
| T2534 | 434-438 | UMLS/C0021755 | denotes | L-1, |
| T2531 | 434-438 | UMLS/C0021753 | denotes | L-1, |
| T2529 | 938-966 | UMLS/C1268005 | denotes | ematopoietic precursor cell |
| T2515 | 598-603 | UMLS/C1556044 | denotes | ther |
| T2509 | 640-654 | UP/Q6RZT5 | denotes | rowth factors, |
| T2505 | 640-654 | UP/P20494 | denotes | rowth factors, |
| T2497 | 90-97 | UMLS/C1883525 | denotes | variety |
| T2495 | 826-833 | UMLS/C1552007 | denotes | ctions |
| T2493 | 576-586 | UMLS/C1548799 | denotes | omponents, |
| T2482 | 190-203 | UMLS/C0334094 | denotes | proliferation |
| T2481 | 640-654 | UP/O57166 | denotes | rowth factors, |
| T2469 | 564-566 | UMLS/C0319022 | denotes | o |
| T2461 | 640-654 | UP/P08072 | denotes | rowth factors, |
| T2458 | 886-896 | UMLS/C1254042 | denotes | aturation |
| T2439 | 744-752 | UMLS/C0079189 | denotes | ytokine |
| T2438 | 617-626 | UMLS/C0079189 | denotes | ytokines, |
| T2435 | 382-391 | UMLS/C0079189 | denotes | cytokines |
| T2434 | 248-257 | UMLS/C0079189 | denotes | cytokines |
| T2431 | 640-654 | UP/Q9JFH4 | denotes | rowth factors, |
| T2613 | 302-313 | UMLS/C1546706 | denotes | macrophages |
| T2612 | 142-153 | UMLS/C1546706 | denotes | macrophages |
| T2610 | 129-140 | UMLS/C1546705 | denotes | lymphocytes |
| T2609 | 576-586 | UMLS/C1524073 | denotes | omponents, |
| T2604 | 159-174 | UMLS/C0011306 | denotes | dendritic cells |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4373 | 985-986 | -RRB- | denotes | ] |
| T4372 | 983-985 | CD | denotes | 11 |
| T4371 | 982-983 | -LRB- | denotes | [ |
| T4370 | 966-981 | NN | denotes | differentiation |
| T4369 | 961-965 | NN | denotes | cell |
| T4368 | 951-960 | NN | denotes | precursor |
| T4367 | 937-950 | JJ | denotes | hematopoietic |
| T4366 | 933-936 | CC | denotes | and |
| T4365 | 931-932 | -COMMA- | denotes | , |
| T4364 | 922-931 | NN | denotes | functions |
| T4363 | 915-921 | NN | denotes | T-cell |
| T4362 | 913-914 | -COMMA- | denotes | , |
| T4361 | 908-913 | NN | denotes | cells |
| T4360 | 901-907 | NN | denotes | plasma |
| T4359 | 896-900 | IN | denotes | into |
| T4358 | 885-895 | NN | denotes | maturation |
| T4357 | 878-884 | NN | denotes | B-cell |
| T4356 | 876-877 | -COMMA- | denotes | , |
| T4355 | 868-876 | NN | denotes | response |
| T4354 | 856-867 | NN | denotes | acute-phase |
| T4353 | 852-855 | DT | denotes | the |
| T4352 | 841-851 | VB | denotes | simulating |
| T4351 | 833-840 | VB | denotes | include |
| T4350 | 825-832 | NN | denotes | actions |
| T4349 | 809-824 | JJ | denotes | proinflammatory |
| T4348 | 805-808 | PRP-DOLLAR- | denotes | its |
| T4347 | 801-804 | CC | denotes | and |
| T4346 | 799-800 | -COMMA- | denotes | , |
| T4345 | 788-799 | NN | denotes | fibroblasts |
| T4344 | 778-787 | VB | denotes | activated |
| T4343 | 775-777 | IN | denotes | by |
| T4342 | 761-774 | RB | denotes | substantially |
| T4341 | 752-760 | VB | denotes | produced |
| T4340 | 743-751 | NN | denotes | cytokine |
| T4339 | 731-742 | JJ | denotes | pleiotropic |
| T4338 | 729-730 | DT | denotes | a |
| T4337 | 726-728 | VB | denotes | is |
| T4336 | 721-725 | NN | denotes | IL-6 |
| T4335 | 718-719 | -RRB- | denotes | ] |
| T4334 | 716-718 | CD | denotes | 10 |
| T4333 | 715-716 | -LRB- | denotes | [ |
| T4332 | 707-714 | NN | denotes | species |
| T4331 | 700-706 | NN | denotes | oxygen |
| T4330 | 691-699 | JJ | denotes | reactive |
| T4329 | 687-690 | CC | denotes | and |
| T4328 | 685-686 | -COMMA- | denotes | , |
| T4327 | 680-685 | NN | denotes | oxide |
| T4326 | 673-679 | JJ | denotes | nitric |
| T4325 | 671-672 | -COMMA- | denotes | , |
| T4324 | 662-671 | NN | denotes | proteases |
| T4323 | 655-661 | NN | denotes | matrix |
| T4322 | 653-654 | -COMMA- | denotes | , |
| T4321 | 646-653 | NN | denotes | factors |
| T4320 | 639-645 | NN | denotes | growth |
| T4319 | 637-638 | -COMMA- | denotes | , |
| T4318 | 627-637 | NN | denotes | chemokines |
| T4317 | 625-626 | -COMMA- | denotes | , |
| T4316 | 616-625 | NN | denotes | cytokines |
| T4315 | 603-615 | JJ | denotes | inflammatory |
| T4314 | 597-602 | JJ | denotes | other |
| T4313 | 587-596 | VB | denotes | including |
| T4312 | 585-586 | -COMMA- | denotes | , |
| T4311 | 575-585 | NN | denotes | components |
| T4310 | 566-574 | NN | denotes | effector |
| T4309 | 563-565 | TO | denotes | to |
| T4308 | 558-562 | NN | denotes | rise |
| T4307 | 553-557 | VB | denotes | give |
| T4306 | 548-552 | PRP | denotes | they |
| T4305 | 544-547 | CC | denotes | and |
| T4304 | 542-543 | -COMMA- | denotes | , |
| T4303 | 531-542 | NN | denotes | destruction |
| T4302 | 525-530 | JJ | denotes | joint |
| T4301 | 521-524 | CC | denotes | and |
| T4300 | 508-520 | NN | denotes | inflammation |
| T4299 | 500-507 | JJ | denotes | chronic |
| T4298 | 497-499 | IN | denotes | of |
| T4297 | 489-496 | NN | denotes | process |
| T4296 | 485-488 | DT | denotes | the |
| T4295 | 482-484 | IN | denotes | in |
| T4294 | 474-481 | JJ | denotes | crucial |
| T4293 | 470-473 | VB | denotes | are |
| T4292 | 468-469 | -COMMA- | denotes | , |
| T4291 | 460-468 | NN | denotes | products |
| T4290 | 449-459 | NN | denotes | macrophage |
| T4289 | 443-448 | JJ | denotes | major |
| T4288 | 439-442 | CD | denotes | two |
| T4287 | 437-438 | -COMMA- | denotes | , |
| T4286 | 433-437 | NN | denotes | IL-1 |
| T4285 | 429-432 | CC | denotes | and |
| T4284 | 427-428 | -RRB- | denotes | ) |
| T4283 | 422-427 | NN | denotes | TNF-α |
| T4282 | 421-422 | -LRB- | denotes | ( |
| T4281 | 415-420 | NN | denotes | alpha |
| T4280 | 408-414 | NN | denotes | factor |
| T4279 | 399-407 | NN | denotes | necrosis |
| T4269 | 318-326 | JJ | denotes | synovial |
| T4268 | 314-317 | CC | denotes | and |
| T4267 | 302-313 | NN | denotes | macrophages |
| T4266 | 298-301 | CC | denotes | and |
| T4265 | 296-297 | -COMMA- | denotes | , |
| T4264 | 291-296 | NN | denotes | joint |
| T4263 | 282-290 | JJ | denotes | inflamed |
| T4262 | 278-281 | DT | denotes | the |
| T4261 | 275-277 | IN | denotes | in |
| T4260 | 262-274 | VB | denotes | overproduced |
| T4259 | 258-261 | VB | denotes | are |
| T4258 | 248-257 | NN | denotes | cytokines |
| T4257 | 239-247 | JJ | denotes | Numerous |
| T4256 | 232-237 | NN | denotes | cells |
| T4255 | 216-231 | JJ | denotes | fibroblast-like |
| T4254 | 207-215 | JJ | denotes | synovial |
| T4253 | 204-206 | IN | denotes | of |
| T4252 | 190-203 | NN | denotes | proliferation |
| T4251 | 185-189 | IN | denotes | with |
| T4250 | 176-184 | RB | denotes | together |
| T4249 | 174-175 | -COMMA- | denotes | , |
| T4248 | 169-174 | NN | denotes | cells |
| T4247 | 159-168 | JJ | denotes | dendritic |
| T4246 | 155-158 | CC | denotes | and |
| T4245 | 153-154 | -COMMA- | denotes | , |
| T4244 | 142-153 | NN | denotes | macrophages |
| T4243 | 140-141 | -COMMA- | denotes | , |
| T4242 | 129-140 | NN | denotes | lymphocytes |
| T4241 | 126-128 | IN | denotes | as |
| T4240 | 121-125 | JJ | denotes | such |
| T4239 | 119-120 | -COMMA- | denotes | , |
| T4238 | 114-119 | NN | denotes | cells |
| T4237 | 101-113 | JJ | denotes | inflammatory |
| T4236 | 98-100 | IN | denotes | of |
| T4235 | 90-97 | NN | denotes | variety |
| T4234 | 88-89 | DT | denotes | a |
| T4233 | 85-87 | IN | denotes | of |
| T4232 | 74-84 | NN | denotes | infiltrate |
| T4231 | 71-73 | DT | denotes | an |
| T4230 | 68-70 | IN | denotes | by |
| T4229 | 54-67 | VB | denotes | characterized |
| T4228 | 51-53 | VB | denotes | is |
| T4227 | 49-50 | -RRB- | denotes | ) |
| T4226 | 47-49 | NN | denotes | RA |
| T4225 | 46-47 | -LRB- | denotes | ( |
| T4224 | 36-45 | NN | denotes | arthritis |
| T4223 | 25-35 | JJ | denotes | rheumatoid |
| T4222 | 22-24 | IN | denotes | of |
| T4221 | 13-21 | NN | denotes | membrane |
| T4220 | 4-12 | JJ | denotes | synovial |
| T4219 | 0-3 | DT | denotes | The |
| T4278 | 393-398 | NN | denotes | Tumor |
| T4277 | 382-391 | NN | denotes | cytokines |
| T4276 | 366-381 | JJ | denotes | proinflammatory |
| T4275 | 363-365 | IN | denotes | of |
| T4274 | 356-362 | NN | denotes | source |
| T4273 | 346-355 | JJ | denotes | important |
| T4272 | 343-345 | DT | denotes | an |
| T4271 | 339-342 | VB | denotes | are |
| T4270 | 327-338 | NN | denotes | fibroblasts |
| R1281 | T4221 | T4219 | arg1Of | membrane,The |
| R1282 | T4221 | T4220 | arg1Of | membrane,synovial |
| R1283 | T4221 | T4222 | arg1Of | membrane,of |
| R1284 | T4221 | T4228 | arg1Of | membrane,is |
| R1285 | T4221 | T4229 | arg2Of | membrane,characterized |
| R1286 | T4224 | T4222 | arg2Of | arthritis,of |
| R1287 | T4224 | T4223 | arg1Of | arthritis,rheumatoid |
| R1288 | T4224 | T4225 | arg1Of | arthritis,( |
| R1290 | T4226 | T4225 | arg2Of | RA,( |
| R1291 | T4227 | T4225 | arg3Of | ),( |
| R1293 | T4229 | T4228 | arg2Of | characterized,is |
| R1295 | T4232 | T4229 | arg1Of | infiltrate,characterized |
| R1296 | T4232 | T4230 | arg2Of | infiltrate,by |
| R1297 | T4232 | T4231 | arg1Of | infiltrate,an |
| R1298 | T4232 | T4233 | arg1Of | infiltrate,of |
| R1300 | T4235 | T4233 | arg2Of | variety,of |
| R1301 | T4235 | T4234 | arg1Of | variety,a |
| R1302 | T4235 | T4236 | arg1Of | variety,of |
| R1304 | T4238 | T4236 | arg2Of | cells,of |
| R1305 | T4238 | T4237 | arg1Of | cells,inflammatory |
| R1306 | T4238 | T4239 | arg1Of | cells,"," |
| R1307 | T4238 | T4241 | arg1Of | cells,as |
| R1308 | T4241 | T4240 | arg1Of | as,such |
| R1310 | T4242 | T4243 | arg1Of | lymphocytes,"," |
| R1313 | T4243 | T4246 | arg1Of | ",",and |
| R1315 | T4244 | T4243 | arg2Of | macrophages,"," |
| R1317 | T4246 | T4241 | arg2Of | and,as |
| R1318 | T4246 | T4245 | arg1Of | and,"," |
| R1319 | T4246 | T4249 | arg1Of | and,"," |
| R1320 | T4246 | T4251 | arg1Of | and,with |
| R1322 | T4248 | T4246 | arg2Of | cells,and |
| R1323 | T4248 | T4247 | arg1Of | cells,dendritic |
| R1324 | T4251 | T4250 | arg1Of | with,together |
| R1326 | T4252 | T4251 | arg2Of | proliferation,with |
| R1327 | T4252 | T4253 | arg1Of | proliferation,of |
| R1329 | T4256 | T4253 | arg2Of | cells,of |
| R1330 | T4256 | T4254 | arg1Of | cells,synovial |
| R1331 | T4256 | T4255 | arg1Of | cells,fibroblast-like |
| R1334 | T4258 | T4257 | arg1Of | cytokines,Numerous |
| R1335 | T4258 | T4259 | arg1Of | cytokines,are |
| R1336 | T4258 | T4260 | arg2Of | cytokines,overproduced |
| R1337 | T4260 | T4259 | arg2Of | overproduced,are |
| R1338 | T4260 | T4261 | arg1Of | overproduced,in |
| R1339 | T4260 | T4266 | arg1Of | overproduced,and |
| R1342 | T4264 | T4261 | arg2Of | joint,in |
| R1343 | T4264 | T4262 | arg1Of | joint,the |
| R1344 | T4264 | T4263 | arg1Of | joint,inflamed |
| R1345 | T4266 | T4265 | arg1Of | and,"," |
| R1347 | T4267 | T4268 | arg1Of | macrophages,and |
| R1349 | T4268 | T4271 | arg1Of | and,are |
| R1351 | T4270 | T4268 | arg2Of | fibroblasts,and |
| R1352 | T4270 | T4269 | arg1Of | fibroblasts,synovial |
| R1353 | T4271 | T4266 | arg2Of | are,and |
| R1355 | T4274 | T4271 | arg2Of | source,are |
| R1356 | T4274 | T4272 | arg1Of | source,an |
| R1357 | T4274 | T4273 | arg1Of | source,important |
| R1358 | T4274 | T4275 | arg1Of | source,of |
| R1360 | T4277 | T4275 | arg2Of | cytokines,of |
| R1361 | T4277 | T4276 | arg1Of | cytokines,proinflammatory |
| R1363 | T4281 | T4278 | arg1Of | alpha,Tumor |
| R1364 | T4281 | T4279 | arg1Of | alpha,necrosis |
| R1365 | T4281 | T4280 | arg1Of | alpha,factor |
| R1366 | T4281 | T4282 | arg1Of | alpha,( |
| R1367 | T4281 | T4285 | arg1Of | alpha,and |
| R1368 | T4283 | T4282 | arg2Of | TNF-α,( |
| R1369 | T4284 | T4282 | arg3Of | ),( |
| R1370 | T4285 | T4293 | arg1Of | and,are |
| R1371 | T4285 | T4294 | arg1Of | and,crucial |
| R1372 | T4286 | T4285 | arg2Of | IL-1,and |
| R1373 | T4286 | T4287 | arg1Of | IL-1,"," |
| R1378 | T4291 | T4287 | arg2Of | products,"," |
| R1379 | T4291 | T4288 | arg1Of | products,two |
| R1380 | T4291 | T4289 | arg1Of | products,major |
| R1381 | T4291 | T4290 | arg1Of | products,macrophage |
| R1382 | T4293 | T4292 | arg1Of | are,"," |
| R1383 | T4293 | T4305 | arg1Of | are,and |
| R1384 | T4294 | T4293 | arg2Of | crucial,are |
| R1385 | T4294 | T4295 | arg1Of | crucial,in |
| R1386 | T4297 | T4295 | arg2Of | process,in |
| R1387 | T4297 | T4296 | arg1Of | process,the |
| R1388 | T4297 | T4298 | arg1Of | process,of |
| R1389 | T4300 | T4299 | arg1Of | inflammation,chronic |
| R1390 | T4300 | T4301 | arg1Of | inflammation,and |
| R1392 | T4301 | T4298 | arg2Of | and,of |
| R1393 | T4303 | T4301 | arg2Of | destruction,and |
| R1394 | T4303 | T4302 | arg1Of | destruction,joint |
| R1396 | T4305 | T4304 | arg1Of | and,"," |
| R1397 | T4306 | T4307 | arg1Of | they,give |
| R1399 | T4307 | T4305 | arg2Of | give,and |
| R1401 | T4308 | T4307 | arg2Of | rise,give |
| R1402 | T4308 | T4309 | arg1Of | rise,to |
| R1405 | T4311 | T4310 | arg1Of | components,effector |
| R1406 | T4311 | T4312 | arg1Of | components,"," |
| R1407 | T4311 | T4313 | arg1Of | components,including |
| R1408 | T4311 | T4329 | arg1Of | components,and |
| R1409 | T4316 | T4314 | arg1Of | cytokines,other |
| R1410 | T4316 | T4315 | arg1Of | cytokines,inflammatory |
| R1411 | T4316 | T4317 | arg1Of | cytokines,"," |
| R1412 | T4317 | T4319 | arg1Of | ",","," |
| R1414 | T4318 | T4317 | arg2Of | chemokines,"," |
| R1416 | T4319 | T4322 | arg1Of | ",","," |
| R1418 | T4340 | T4337 | arg2Of | cytokine,is |
| R1419 | T4321 | T4319 | arg2Of | factors,"," |
| R1420 | T4321 | T4320 | arg1Of | factors,growth |
| R1421 | T4322 | T4325 | arg1Of | ",","," |
| R1422 | T4324 | T4322 | arg2Of | proteases,"," |
| R1423 | T4324 | T4323 | arg1Of | proteases,matrix |
| R1424 | T4325 | T4313 | arg2Of | ",",including |
| R1425 | T4327 | T4325 | arg2Of | oxide,"," |
| R1426 | T4327 | T4326 | arg1Of | oxide,nitric |
| R1427 | T4329 | T4309 | arg2Of | and,to |
| R1428 | T4329 | T4328 | arg1Of | and,"," |
| R1429 | T4340 | T4338 | arg1Of | cytokine,a |
| R1430 | T4340 | T4339 | arg1Of | cytokine,pleiotropic |
| R1431 | T4340 | T4341 | arg2Of | cytokine,produced |
| R1432 | T4332 | T4329 | arg2Of | species,and |
| R1433 | T4332 | T4330 | arg1Of | species,reactive |
| R1434 | T4332 | T4331 | arg1Of | species,oxygen |
| R1435 | T4332 | T4333 | arg1Of | species,[ |
| R1436 | T4334 | T4333 | arg2Of | 10,[ |
| R1437 | T4335 | T4333 | arg3Of | ],[ |
| R1438 | T4341 | T4342 | arg1Of | produced,substantially |
| R1439 | T4336 | T4337 | arg1Of | IL-6,is |
| R1440 | T4345 | T4341 | arg1Of | fibroblasts,produced |
| R1441 | T4337 | T4347 | arg1Of | is,and |
| R1442 | T4345 | T4343 | arg2Of | fibroblasts,by |
| R1443 | T4345 | T4344 | arg2Of | fibroblasts,activated |
| R1444 | T4347 | T4346 | arg1Of | and,"," |
| R1446 | T4350 | T4348 | arg1Of | actions,its |
| R1456 | T4350 | T4349 | arg1Of | actions,proinflammatory |
| R1457 | T4350 | T4351 | arg1Of | actions,include |
| R1458 | T4351 | T4347 | arg2Of | include,and |
| R1467 | T4352 | T4351 | arg2Of | simulating,include |
| R1475 | T4352 | T4371 | arg1Of | simulating,[ |
| R1478 | T4355 | T4352 | arg2Of | response,simulating |
| R1484 | T4355 | T4353 | arg1Of | response,the |
| R1488 | T4355 | T4354 | arg1Of | response,acute-phase |
| R1490 | T4355 | T4356 | arg1Of | response,"," |
| R1492 | T4358 | T4357 | arg1Of | maturation,B-cell |
| R1499 | T4358 | T4359 | arg1Of | maturation,into |
| R1501 | T4358 | T4366 | arg1Of | maturation,and |
| R1503 | T4361 | T4360 | arg1Of | cells,plasma |
| R1510 | T4361 | T4362 | arg1Of | cells,"," |
| R1513 | T4362 | T4359 | arg2Of | ",",into |
| R1514 | T4364 | T4362 | arg2Of | functions,"," |
| R1515 | T4364 | T4363 | arg1Of | functions,T-cell |
| R1525 | T4366 | T4356 | arg2Of | and,"," |
| R1529 | T4366 | T4365 | arg1Of | and,"," |
| R1530 | T4370 | T4366 | arg2Of | differentiation,and |
| R1539 | T4370 | T4367 | arg1Of | differentiation,hematopoietic |
| R1545 | T4370 | T4368 | arg1Of | differentiation,precursor |
| R1553 | T4370 | T4369 | arg1Of | differentiation,cell |
| R1556 | T4372 | T4371 | arg2Of | 11,[ |
| R1559 | T4373 | T4371 | arg3Of | ],[ |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3497 | 731-751 | Protein | denotes | pleiotropic cytokine |
| T3496 | 721-725 | Protein | denotes | IL-6 |
| T3495 | 433-437 | Protein | denotes | IL-1 |
| T3494 | 422-427 | Protein | denotes | TNF-α |
| T3493 | 393-420 | Protein | denotes | Tumor necrosis factor alpha |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3840 | 422-425 | http://www.uniprot.org/uniprot/P01375 | denotes | TNF |
| T3704 | 415-425 | http://www.uniprot.org/uniprot/P01375 | denotes | alpha (TNF |
| T3703 | 721-725 | http://www.uniprot.org/uniprot/P05231 | denotes | IL-6 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3299 | 961-981 | http://purl.obolibrary.org/obo/GO_0030154 | denotes | cell differentiation |
| T3298 | 880-895 | http://purl.obolibrary.org/obo/GO_0048469 | denotes | cell maturation |
| T3297 | 878-895 | http://purl.obolibrary.org/obo/GO_0002344 | denotes | B-cell maturation |
| T3296 | 778-799 | http://purl.obolibrary.org/obo/GO_0072537 | denotes | activated fibroblasts |
| T3295 | 639-645 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
| T3294 | 399-407 | http://purl.obolibrary.org/obo/GO_0070265 | denotes | necrosis |
| T3293 | 399-407 | http://purl.obolibrary.org/obo/GO_0019835 | denotes | necrosis |
| T3292 | 399-407 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | necrosis |
| T3291 | 399-407 | http://purl.obolibrary.org/obo/GO_0001906 | denotes | necrosis |
| T3260 | 508-520 | http://purl.obolibrary.org/obo/GO_0006954 | denotes | inflammation |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3593 | 13-21 | http://purl.obolibrary.org/obo/GO_0016020 | denotes | membrane |
| T3583 | 961-965 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T3582 | 917-921 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T3581 | 880-884 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3575 | 721-725 | http://purl.obolibrary.org/obo/GO_0005138 | denotes | IL-6 |
| T3563 | 433-437 | http://purl.obolibrary.org/obo/GO_0005149 | denotes | IL-1 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3246 | 721-987 | Sentence | denotes | IL-6 is a pleiotropic cytokine produced substantially by activated fibroblasts, and its proinflammatory actions include simulating the acute-phase response, B-cell maturation into plasma cells, T-cell functions, and hematopoietic precursor cell differentiation [11]. |
| T3245 | 393-720 | Sentence | denotes | Tumor necrosis factor alpha (TNF-α) and IL-1, two major macrophage products, are crucial in the process of chronic inflammation and joint destruction, and they give rise to effector components, including other inflammatory cytokines, chemokines, growth factors, matrix proteases, nitric oxide, and reactive oxygen species [10]. |
| T3244 | 239-392 | Sentence | denotes | Numerous cytokines are overproduced in the inflamed joint, and macrophages and synovial fibroblasts are an important source of proinflammatory cytokines. |
| T3243 | 0-238 | Sentence | denotes | The synovial membrane of rheumatoid arthritis (RA) is characterized by an infiltrate of a variety of inflammatory cells, such as lymphocytes, macrophages, and dendritic cells, together with proliferation of synovial fibroblast-like cells. |
| T20 | 0-238 | Sentence | denotes | The synovial membrane of rheumatoid arthritis (RA) is characterized by an infiltrate of a variety of inflammatory cells, such as lymphocytes, macrophages, and dendritic cells, together with proliferation of synovial fibroblast-like cells. |
| T21 | 239-392 | Sentence | denotes | Numerous cytokines are overproduced in the inflamed joint, and macrophages and synovial fibroblasts are an important source of proinflammatory cytokines. |
| T22 | 393-720 | Sentence | denotes | Tumor necrosis factor alpha (TNF-α) and IL-1, two major macrophage products, are crucial in the process of chronic inflammation and joint destruction, and they give rise to effector components, including other inflammatory cytokines, chemokines, growth factors, matrix proteases, nitric oxide, and reactive oxygen species [10]. |
| T23 | 721-987 | Sentence | denotes | IL-6 is a pleiotropic cytokine produced substantially by activated fibroblasts, and its proinflammatory actions include simulating the acute-phase response, B-cell maturation into plasma cells, T-cell functions, and hematopoietic precursor cell differentiation [11]. |
ICD10
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3599 | 36-45 | http://purl.bioontology.org/ontology/ICD10/M13.9 | denotes | arthritis |
| T3598 | 25-45 | http://purl.bioontology.org/ontology/ICD10/M06.9 | denotes | rheumatoid arthritis |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3900 | 731-751 | Protein | denotes | pleiotropic cytokine |
| T3899 | 721-725 | Protein | denotes | IL-6 |
| T3898 | 433-437 | Protein | denotes | IL-1 |
| T3897 | 422-427 | Protein | denotes | TNF-α |
| T3896 | 393-420 | Protein | denotes | Tumor necrosis factor alpha |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6465 | 752-760 | Gene_expression | denotes | produced |
| T6410 | 731-751 | Protein | denotes | pleiotropic cytokine |
| T6409 | 721-725 | Protein | denotes | IL-6 |
| T6408 | 433-437 | Protein | denotes | IL-1 |
| T6407 | 422-427 | Protein | denotes | TNF-α |
| T6406 | 393-420 | Protein | denotes | Tumor necrosis factor alpha |
| R3149 | T6409 | T6465 | themeOf | IL-6,produced |
| R3153 | T6410 | T6465 | themeOf | pleiotropic cytokine,produced |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4905 | 752-760 | Gene_expression | denotes | produced |
| T4848 | 731-751 | Protein | denotes | pleiotropic cytokine |
| T4847 | 721-725 | Protein | denotes | IL-6 |
| T4846 | 433-437 | Protein | denotes | IL-1 |
| T4845 | 422-427 | Protein | denotes | TNF-α |
| T4844 | 393-420 | Protein | denotes | Tumor necrosis factor alpha |
| R1914 | T4847 | T4905 | themeOf | IL-6,produced |
| R1917 | T4848 | T4905 | themeOf | pleiotropic cytokine,produced |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5918 | 778-787 | Positive_regulation | denotes | activated |
| T5917 | 752-760 | Gene_expression | denotes | produced |
| T5860 | 731-751 | Protein | denotes | pleiotropic cytokine |
| T5859 | 721-725 | Protein | denotes | IL-6 |
| T5858 | 433-437 | Protein | denotes | IL-1 |
| T5857 | 422-427 | Protein | denotes | TNF-α |
| T5856 | 393-420 | Protein | denotes | Tumor necrosis factor alpha |
| R2930 | T5859 | T5917 | themeOf | IL-6,produced |
| R2931 | T5860 | T5917 | themeOf | pleiotropic cytokine,produced |
| R2961 | T5917 | T5918 | themeOf | produced,activated |
| R2962 | T5917 | T5918 | themeOf | produced,activated |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T6248 | 566-574 | Entity | denotes | effector |
| T6197 | 901-932 | Entity | denotes | plasma cells, T-cell functions, |
| T6196 | 729-799 | Protein | denotes | a pleiotropic cytokine produced substantially by activated fibroblasts |
| T6194 | 393-428 | Protein | denotes | Tumor necrosis factor alpha (TNF-α) |
| T6182 | 216-237 | Entity | denotes | fibroblast-like cells |
| T6177 | 915-921 | Entity | denotes | T-cell |
| T6175 | 318-338 | Entity | denotes | synovial fibroblasts |
| T6174 | 673-685 | Entity | denotes | nitric oxide |
| T6165 | 627-637 | Protein | denotes | chemokines |
| T6164 | 47-49 | Protein | denotes | RA |
| T6238 | 655-671 | Protein | denotes | matrix proteases |
| T6237 | 159-174 | Entity | denotes | dendritic cells |
| T6235 | 239-257 | Protein | denotes | Numerous cytokines |
| T6222 | 721-725 | Protein | denotes | IL-6 |
| T6220 | 937-965 | Entity | denotes | hematopoietic precursor cell |
| T6212 | 98-119 | Entity | denotes | of inflammatory cells |
| T6202 | 216-237 | Entity | denotes | fibroblast-like cells |
| T6273 | 422-427 | Protein | denotes | TNF-α |
| T6269 | 597-625 | Protein | denotes | other inflammatory cytokines |
| T6264 | 778-799 | Entity | denotes | activated fibroblasts |
| T6296 | 227-237 | Entity | denotes | like cells |
| T6293 | 439-468 | Entity | denotes | two major macrophage products |
| T6288 | 449-459 | Entity | denotes | macrophage |
| T6287 | 129-140 | Entity | denotes | lymphocytes |
| T6331 | 363-391 | Protein | denotes | of proinflammatory cytokines |
| T6327 | 302-313 | Entity | denotes | macrophages |
| T6323 | 433-469 | Protein | denotes | IL-1, two major macrophage products, |
| T6315 | 142-153 | Entity | denotes | macrophages |
| T6359 | 239-296 | Gene_expression | denotes | Numerous cytokines are overproduced in the inflamed joint |
| T6358 | 239-296 | Positive_regulation | denotes | Numerous cytokines are overproduced in the inflamed joint |
| R3121 | T6235 | T6358 | themeOf | Numerous cytokines,Numerous cytokines are overproduced in the inflamed joint |
| R3122 | T6235 | T6359 | themeOf | Numerous cytokines,Numerous cytokines are overproduced in the inflamed joint |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5310 | 662-671 | NNS | denotes | proteases |
| T5309 | 655-661 | NN | denotes | matrix |
| T5308 | 653-654 | , | denotes | , |
| T5307 | 646-653 | NNS | denotes | factors |
| T5306 | 639-645 | NN | denotes | growth |
| T5305 | 637-638 | , | denotes | , |
| T5304 | 627-637 | NNS | denotes | chemokines |
| T5303 | 625-626 | , | denotes | , |
| T5302 | 616-625 | NNS | denotes | cytokines |
| T5301 | 603-615 | JJ | denotes | inflammatory |
| T5300 | 597-602 | JJ | denotes | other |
| T5299 | 587-596 | VBG | denotes | including |
| T5298 | 585-586 | , | denotes | , |
| T5297 | 575-585 | NNS | denotes | components |
| T5296 | 566-574 | VB | denotes | effector |
| T5295 | 563-565 | TO | denotes | to |
| T5294 | 558-562 | VB | denotes | rise |
| T5293 | 553-557 | VBP | denotes | give |
| T5292 | 548-552 | PRP | denotes | they |
| T5291 | 544-547 | CC | denotes | and |
| T5290 | 542-543 | , | denotes | , |
| T5289 | 531-542 | NN | denotes | destruction |
| T5288 | 525-530 | JJ | denotes | joint |
| T5287 | 521-524 | CC | denotes | and |
| T5286 | 508-520 | NN | denotes | inflammation |
| T5285 | 500-507 | JJ | denotes | chronic |
| T5284 | 497-499 | IN | denotes | of |
| T5283 | 489-496 | NN | denotes | process |
| T5282 | 485-488 | DT | denotes | the |
| T5281 | 482-484 | IN | denotes | in |
| T5280 | 474-481 | JJ | denotes | crucial |
| T5279 | 470-473 | VBP | denotes | are |
| T5278 | 468-469 | , | denotes | , |
| T5277 | 460-468 | NNS | denotes | products |
| T5276 | 449-459 | NN | denotes | macrophage |
| T5275 | 443-448 | JJ | denotes | major |
| T5274 | 439-442 | CD | denotes | two |
| T5273 | 437-438 | , | denotes | , |
| T5272 | 433-437 | NNP | denotes | IL-1 |
| T5271 | 429-432 | CC | denotes | and |
| T5270 | 427-428 | -RRB- | denotes | ) |
| T5269 | 422-427 | NNP | denotes | TNF-α |
| T5268 | 421-422 | -LRB- | denotes | ( |
| T5267 | 415-420 | NN | denotes | alpha |
| T5266 | 408-414 | NN | denotes | factor |
| T5265 | 399-407 | NN | denotes | necrosis |
| T5264 | 393-398 | NN | denotes | Tumor |
| T5263 | 391-392 | . | denotes | . |
| T5262 | 382-391 | NNS | denotes | cytokines |
| T5261 | 366-381 | JJ | denotes | proinflammatory |
| T5260 | 363-365 | IN | denotes | of |
| T5259 | 356-362 | NN | denotes | source |
| T5258 | 346-355 | JJ | denotes | important |
| T5257 | 343-345 | DT | denotes | an |
| T5256 | 339-342 | VBP | denotes | are |
| T5255 | 327-338 | NNS | denotes | fibroblasts |
| T5254 | 318-326 | JJ | denotes | synovial |
| T5253 | 314-317 | CC | denotes | and |
| T5252 | 302-313 | NNS | denotes | macrophages |
| T5251 | 298-301 | CC | denotes | and |
| T5250 | 296-297 | , | denotes | , |
| T5249 | 291-296 | NN | denotes | joint |
| T5248 | 282-290 | JJ | denotes | inflamed |
| T5247 | 278-281 | DT | denotes | the |
| T5246 | 275-277 | IN | denotes | in |
| T5245 | 262-274 | VBN | denotes | overproduced |
| T5244 | 258-261 | VBP | denotes | are |
| T5243 | 248-257 | NNS | denotes | cytokines |
| T5242 | 239-247 | JJ | denotes | Numerous |
| T5241 | 237-238 | . | denotes | . |
| T5240 | 232-237 | NNS | denotes | cells |
| T5239 | 216-231 | JJ | denotes | fibroblast-like |
| T5238 | 207-215 | JJ | denotes | synovial |
| T5237 | 204-206 | IN | denotes | of |
| T5236 | 190-203 | NN | denotes | proliferation |
| T5235 | 185-189 | IN | denotes | with |
| T5234 | 176-184 | RB | denotes | together |
| T5233 | 174-175 | , | denotes | , |
| T5232 | 169-174 | NNS | denotes | cells |
| T5231 | 159-168 | JJ | denotes | dendritic |
| T5230 | 155-158 | CC | denotes | and |
| T5229 | 153-154 | , | denotes | , |
| T5228 | 142-153 | NNS | denotes | macrophages |
| T5227 | 140-141 | , | denotes | , |
| T5226 | 129-140 | NNS | denotes | lymphocytes |
| T5225 | 126-128 | IN | denotes | as |
| T5224 | 121-125 | JJ | denotes | such |
| T5223 | 119-120 | , | denotes | , |
| T5222 | 114-119 | NNS | denotes | cells |
| T5221 | 101-113 | JJ | denotes | inflammatory |
| T5220 | 98-100 | IN | denotes | of |
| T5219 | 90-97 | NN | denotes | variety |
| T5218 | 88-89 | DT | denotes | a |
| T5217 | 85-87 | IN | denotes | of |
| T5216 | 74-84 | VB | denotes | infiltrate |
| T5215 | 71-73 | DT | denotes | an |
| T5214 | 68-70 | IN | denotes | by |
| T5213 | 54-67 | VBN | denotes | characterized |
| T5212 | 51-53 | VBZ | denotes | is |
| T5211 | 49-50 | -RRB- | denotes | ) |
| T5210 | 47-49 | NNP | denotes | RA |
| T5209 | 46-47 | -LRB- | denotes | ( |
| T5208 | 36-45 | NNS | denotes | arthritis |
| T5207 | 25-35 | JJ | denotes | rheumatoid |
| T5206 | 22-24 | IN | denotes | of |
| T5205 | 13-21 | NN | denotes | membrane |
| T5204 | 4-12 | JJ | denotes | synovial |
| T5203 | 0-3 | DT | denotes | The |
| T5345 | 885-895 | NN | denotes | maturation |
| T5344 | 878-884 | NNP | denotes | B-cell |
| T5343 | 876-877 | , | denotes | , |
| T5342 | 868-876 | NN | denotes | response |
| T5341 | 856-867 | JJ | denotes | acute-phase |
| T5340 | 852-855 | DT | denotes | the |
| T5339 | 841-851 | VBG | denotes | simulating |
| T5338 | 833-840 | VBP | denotes | include |
| T5337 | 825-832 | NNS | denotes | actions |
| T5336 | 809-824 | JJ | denotes | proinflammatory |
| T5335 | 805-808 | PRP$ | denotes | its |
| T5334 | 801-804 | CC | denotes | and |
| T5333 | 799-800 | , | denotes | , |
| T5332 | 788-799 | NNS | denotes | fibroblasts |
| T5331 | 778-787 | VBN | denotes | activated |
| T5330 | 775-777 | IN | denotes | by |
| T5329 | 761-774 | RB | denotes | substantially |
| T5328 | 752-760 | VBD | denotes | produced |
| T5327 | 743-751 | NN | denotes | cytokine |
| T5326 | 731-742 | JJ | denotes | pleiotropic |
| T5325 | 729-730 | DT | denotes | a |
| T5324 | 726-728 | VBZ | denotes | is |
| T5323 | 721-725 | NN | denotes | IL-6 |
| T5322 | 719-720 | . | denotes | . |
| T5321 | 718-719 | NNP | denotes | ] |
| T5320 | 716-718 | CD | denotes | 10 |
| T5319 | 715-716 | NNP | denotes | [ |
| T5318 | 707-714 | NNS | denotes | species |
| T5317 | 700-706 | NN | denotes | oxygen |
| T5316 | 691-699 | JJ | denotes | reactive |
| T5315 | 687-690 | CC | denotes | and |
| T5314 | 685-686 | , | denotes | , |
| T5313 | 680-685 | NN | denotes | oxide |
| T5312 | 673-679 | JJ | denotes | nitric |
| T5311 | 671-672 | , | denotes | , |
| T5361 | 986-987 | . | denotes | . |
| T5360 | 985-986 | NNP | denotes | ] |
| T5359 | 983-985 | CD | denotes | 11 |
| T5358 | 982-983 | NNP | denotes | [ |
| T5357 | 966-981 | NN | denotes | differentiation |
| T5356 | 961-965 | NN | denotes | cell |
| T5355 | 951-960 | NN | denotes | precursor |
| T5354 | 937-950 | JJ | denotes | hematopoietic |
| T5353 | 933-936 | CC | denotes | and |
| T5352 | 931-932 | , | denotes | , |
| T5351 | 922-931 | NNS | denotes | functions |
| T5350 | 915-921 | NNP | denotes | T-cell |
| T5349 | 913-914 | , | denotes | , |
| T5348 | 908-913 | NNS | denotes | cells |
| T5347 | 901-907 | NN | denotes | plasma |
| T5346 | 896-900 | IN | denotes | into |
| R2254 | T5262 | T5260 | pobj | cytokines,of |
| R2255 | T5263 | T5256 | punct | .,are |
| R2257 | T5264 | T5267 | compound | Tumor,alpha |
| R2258 | T5265 | T5266 | compound | necrosis,factor |
| R2259 | T5266 | T5267 | compound | factor,alpha |
| R2261 | T5267 | T5279 | nsubj | alpha,are |
| R2262 | T5268 | T5269 | punct | (,TNF-α |
| R2263 | T5269 | T5267 | appos | TNF-α,alpha |
| R2265 | T5270 | T5269 | punct | ),TNF-α |
| R2266 | T5271 | T5267 | cc | and,alpha |
| R2267 | T5272 | T5267 | conj | IL-1,alpha |
| R2269 | T5273 | T5272 | punct | ",",IL-1 |
| R2270 | T5274 | T5277 | nummod | two,products |
| R2271 | T5275 | T5277 | amod | major,products |
| R2273 | T5276 | T5277 | compound | macrophage,products |
| R2274 | T5277 | T5267 | appos | products,alpha |
| R2276 | T5278 | T5279 | punct | ",",are |
| R2277 | T5279 | T5279 | ROOT | are,are |
| R2278 | T5280 | T5279 | acomp | crucial,are |
| R2279 | T5281 | T5279 | prep | in,are |
| R2280 | T5282 | T5283 | det | the,process |
| R2281 | T5283 | T5281 | pobj | process,in |
| R2282 | T5284 | T5283 | prep | of,process |
| R2284 | T5285 | T5286 | amod | chronic,inflammation |
| R2285 | T5286 | T5284 | pobj | inflammation,of |
| R2286 | T5287 | T5286 | cc | and,inflammation |
| R2288 | T5288 | T5289 | amod | joint,destruction |
| R2289 | T5289 | T5286 | conj | destruction,inflammation |
| R2290 | T5290 | T5279 | punct | ",",are |
| R2292 | T5291 | T5279 | cc | and,are |
| R2293 | T5292 | T5293 | nsubj | they,give |
| R2294 | T5293 | T5279 | conj | give,are |
| R2296 | T5294 | T5293 | dobj | rise,give |
| R2297 | T5295 | T5296 | aux | to,effector |
| R2299 | T5296 | T5294 | advcl | effector,rise |
| R2300 | T5297 | T5296 | dobj | components,effector |
| R2301 | T5298 | T5297 | punct | ",",components |
| R2302 | T5299 | T5297 | prep | including,components |
| R2304 | T5300 | T5302 | amod | other,cytokines |
| R2305 | T5301 | T5302 | amod | inflammatory,cytokines |
| R2306 | T5302 | T5299 | pobj | cytokines,including |
| R2308 | T5303 | T5302 | punct | ",",cytokines |
| R2309 | T5304 | T5302 | conj | chemokines,cytokines |
| R2310 | T5305 | T5304 | punct | ",",chemokines |
| R2311 | T5203 | T5205 | det | The,membrane |
| R2312 | T5306 | T5307 | compound | growth,factors |
| R2313 | T5307 | T5304 | conj | factors,chemokines |
| R2314 | T5204 | T5205 | amod | synovial,membrane |
| R2315 | T5205 | T5213 | nsubjpass | membrane,characterized |
| R2318 | T5206 | T5205 | prep | of,membrane |
| R2320 | T5207 | T5208 | amod | rheumatoid,arthritis |
| R2321 | T5208 | T5206 | pobj | arthritis,of |
| R2325 | T5209 | T5210 | punct | (,RA |
| R2330 | T5210 | T5208 | appos | RA,arthritis |
| R2335 | T5211 | T5205 | punct | ),membrane |
| R2338 | T5212 | T5213 | auxpass | is,characterized |
| R2342 | T5213 | T5213 | ROOT | characterized,characterized |
| R2345 | T5214 | T5213 | agent | by,characterized |
| R2349 | T5215 | T5216 | det | an,infiltrate |
| R2354 | T5216 | T5214 | pobj | infiltrate,by |
| R2357 | T5217 | T5216 | prep | of,infiltrate |
| R2361 | T5218 | T5219 | det | a,variety |
| R2363 | T5342 | T5339 | dobj | response,simulating |
| R2364 | T5343 | T5339 | punct | ",",simulating |
| R2365 | T5219 | T5217 | pobj | variety,of |
| R2366 | T5344 | T5345 | compound | B-cell,maturation |
| R2367 | T5345 | T5339 | conj | maturation,simulating |
| R2368 | T5220 | T5219 | prep | of,variety |
| R2369 | T5221 | T5222 | amod | inflammatory,cells |
| R2370 | T5346 | T5345 | prep | into,maturation |
| R2371 | T5347 | T5348 | compound | plasma,cells |
| R2372 | T5222 | T5220 | pobj | cells,of |
| R2373 | T5348 | T5346 | pobj | cells,into |
| R2374 | T5349 | T5345 | punct | ",",maturation |
| R2375 | T5350 | T5351 | compound | T-cell,functions |
| R2376 | T5223 | T5222 | punct | ",",cells |
| R2377 | T5351 | T5345 | conj | functions,maturation |
| R2378 | T5352 | T5351 | punct | ",",functions |
| R2379 | T5353 | T5351 | cc | and,functions |
| R2380 | T5224 | T5225 | amod | such,as |
| R2383 | T5225 | T5222 | prep | as,cells |
| R2387 | T5226 | T5225 | pobj | lymphocytes,as |
| R2391 | T5227 | T5226 | punct | ",",lymphocytes |
| R2393 | T5228 | T5226 | conj | macrophages,lymphocytes |
| R2397 | T5229 | T5228 | punct | ",",macrophages |
| R2401 | T5230 | T5228 | cc | and,macrophages |
| R2405 | T5231 | T5232 | amod | dendritic,cells |
| R2409 | T5232 | T5228 | conj | cells,macrophages |
| R2413 | T5233 | T5216 | punct | ",",infiltrate |
| R2417 | T5234 | T5235 | advmod | together,with |
| R2420 | T5235 | T5216 | prep | with,infiltrate |
| R2425 | T5236 | T5235 | pobj | proliferation,with |
| R2428 | T5237 | T5236 | prep | of,proliferation |
| R2436 | T5238 | T5240 | amod | synovial,cells |
| R2437 | T5239 | T5240 | amod | fibroblast-like,cells |
| R2441 | T5240 | T5237 | pobj | cells,of |
| R2444 | T5241 | T5213 | punct | .,characterized |
| R2448 | T5242 | T5243 | amod | Numerous,cytokines |
| R2450 | T5243 | T5245 | nsubjpass | cytokines,overproduced |
| R2451 | T5244 | T5245 | auxpass | are,overproduced |
| R2454 | T5245 | T5245 | ROOT | overproduced,overproduced |
| R2458 | T5246 | T5245 | prep | in,overproduced |
| R2461 | T5247 | T5249 | det | the,joint |
| R2464 | T5248 | T5249 | amod | inflamed,joint |
| R2466 | T5249 | T5246 | pobj | joint,in |
| R2470 | T5250 | T5245 | punct | ",",overproduced |
| R2475 | T5251 | T5245 | cc | and,overproduced |
| R2478 | T5252 | T5256 | nsubj | macrophages,are |
| R2486 | T5253 | T5252 | cc | and,macrophages |
| R2490 | T5254 | T5255 | amod | synovial,fibroblasts |
| R2493 | T5255 | T5252 | conj | fibroblasts,macrophages |
| R2497 | T5256 | T5245 | conj | are,overproduced |
| R2501 | T5257 | T5259 | det | an,source |
| R2502 | T5258 | T5259 | amod | important,source |
| R2504 | T5259 | T5256 | attr | source,are |
| R2508 | T5260 | T5259 | prep | of,source |
| R2512 | T5261 | T5262 | amod | proinflammatory,cytokines |
| R2316 | T5308 | T5307 | punct | ",",factors |
| R2317 | T5309 | T5310 | compound | matrix,proteases |
| R2319 | T5310 | T5307 | conj | proteases,factors |
| R2322 | T5311 | T5310 | punct | ",",proteases |
| R2323 | T5312 | T5313 | amod | nitric,oxide |
| R2324 | T5313 | T5310 | conj | oxide,proteases |
| R2326 | T5314 | T5313 | punct | ",",oxide |
| R2327 | T5315 | T5313 | cc | and,oxide |
| R2328 | T5316 | T5318 | amod | reactive,species |
| R2329 | T5317 | T5318 | compound | oxygen,species |
| R2331 | T5318 | T5313 | conj | species,oxide |
| R2332 | T5319 | T5321 | nmod | [,] |
| R2333 | T5320 | T5321 | nummod | 10,] |
| R2334 | T5321 | T5297 | appos | ],components |
| R2336 | T5322 | T5293 | punct | .,give |
| R2337 | T5323 | T5324 | nsubj | IL-6,is |
| R2339 | T5324 | T5324 | ROOT | is,is |
| R2340 | T5325 | T5327 | det | a,cytokine |
| R2341 | T5326 | T5327 | amod | pleiotropic,cytokine |
| R2343 | T5327 | T5324 | attr | cytokine,is |
| R2344 | T5328 | T5327 | acl | produced,cytokine |
| R2346 | T5329 | T5328 | advmod | substantially,produced |
| R2347 | T5330 | T5328 | agent | by,produced |
| R2348 | T5331 | T5332 | amod | activated,fibroblasts |
| R2350 | T5332 | T5330 | pobj | fibroblasts,by |
| R2351 | T5333 | T5328 | punct | ",",produced |
| R2352 | T5334 | T5327 | cc | and,cytokine |
| R2353 | T5335 | T5337 | poss | its,actions |
| R2355 | T5336 | T5337 | amod | proinflammatory,actions |
| R2356 | T5337 | T5338 | nsubj | actions,include |
| R2358 | T5338 | T5324 | conj | include,is |
| R2359 | T5339 | T5338 | xcomp | simulating,include |
| R2360 | T5340 | T5342 | det | the,response |
| R2362 | T5341 | T5342 | amod | acute-phase,response |
| R2381 | T5354 | T5356 | amod | hematopoietic,cell |
| R2382 | T5355 | T5356 | compound | precursor,cell |
| R2384 | T5356 | T5357 | compound | cell,differentiation |
| R2385 | T5357 | T5351 | conj | differentiation,functions |
| R2386 | T5358 | T5360 | nmod | [,] |
| R2388 | T5359 | T5360 | nummod | 11,] |
| R2389 | T5360 | T5357 | appos | ],differentiation |
| R2390 | T5361 | T5338 | punct | .,include |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3757 | 752-760 | Gene_expression | denotes | produced |
| T3756 | 721-725 | Protein | denotes | IL-6 |
| T3755 | 433-437 | Protein | denotes | IL-1 |
| T3754 | 422-427 | Protein | denotes | TNF-α |
| T3753 | 393-420 | Protein | denotes | Tumor necrosis factor alpha |
| R980 | T3756 | T3757 | themeOf | IL-6,produced |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2374 | 731-751 | Protein | denotes | pleiotropic cytokine |
| T2373 | 721-725 | Protein | denotes | IL-6 |
| T2372 | 433-437 | Protein | denotes | IL-1 |
| T2371 | 422-427 | Protein | denotes | TNF-α |
| T2370 | 393-420 | Protein | denotes | Tumor necrosis factor alpha |
| T2292 | 731-751 | Protein | denotes | pleiotropic cytokine |
| T2291 | 721-725 | Protein | denotes | IL-6 |
| T2290 | 433-437 | Protein | denotes | IL-1 |
| T2289 | 422-427 | Protein | denotes | TNF-α |
| T2288 | 393-420 | Protein | denotes | Tumor necrosis factor alpha |
| R803 | T2371 | T2370 | equivalentTo | TNF-α,Tumor necrosis factor alpha |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T2089 | 731-751 | Protein | denotes | pleiotropic cytokine |
| T2088 | 721-725 | Protein | denotes | IL-6 |
| T2087 | 433-437 | Protein | denotes | IL-1 |
| T2086 | 422-427 | Protein | denotes | TNF-α |
| T2085 | 393-420 | Protein | denotes | Tumor necrosis factor alpha |
| R725 | T2086 | T2085 | equivalentTo | TNF-α,Tumor necrosis factor alpha |