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PMC:1064873 / 30509-31783 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T22184 1257-1262 Protein denotes STAT3
T22183 1242-1247 Protein denotes gp130
T22182 1141-1145 Protein denotes CD4+
T22181 1094-1108 Protein denotes gp130F759/F759
T22180 1006-1036 Protein denotes IL-6 family cytokine receptor)
T22179 951-998 Protein denotes gp130 (the transmembrane glycoprotein β subunit
T22178 908-947 Protein denotes Src homology phosphatase-2 binding site
T22177 874-888 Protein denotes gp130F759/F759
T22176 797-800 Protein denotes Th1
T22175 778-783 Protein denotes STAT3
T22174 632-637 Protein denotes STAT3
T22173 594-598 Protein denotes IL-6
T22172 506-511 Protein denotes STAT3
T22171 466-470 Protein denotes IL-6
T22170 427-432 Protein denotes STAT3
T22169 329-366 Protein denotes Fc gamma receptor type I and type III
T22168 182-205 Protein denotes STAT3-activating factor
T22167 164-168 Protein denotes IL-6
T22166 71-76 Protein denotes STAT3
T22165 0-5 Protein denotes STAT3

2_test

Id Subject Object Predicate Lexical cue
15535835-7500028-4156925 159-161 7500028 denotes 36
15535835-7869026-4156926 382-384 7869026 denotes 31
15535835-11748261-4156927 611-613 11748261 denotes 37
15535835-12444174-4156928 729-731 12444174 denotes 38
15535835-12370259-4156929 1082-1084 12370259 denotes 39

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T25868 1263-1273 NN denotes activation
T25867 1257-1262 NN denotes STAT3
T25866 1242-1256 JJ denotes gp130-mediated
T25865 1234-1241 IN denotes through
T25864 1228-1233 NN denotes death
T25863 1223-1227 NN denotes cell
T25862 1204-1222 JJ denotes activation-induced
T25861 1201-1203 TO denotes to
T25860 1191-1200 JJ denotes resistant
T25859 1187-1190 CC denotes and
T25858 1177-1186 VB denotes activated
T25857 1165-1176 RB denotes chronically
T25856 1161-1164 VB denotes are
T25855 1159-1160 -COMMA- denotes ,
T25854 1153-1159 NN denotes subset
T25853 1146-1152 NN denotes T-cell
T25852 1141-1145 JJ denotes CD4+
T25851 1137-1140 DT denotes the
T25850 1124-1136 RB denotes particularly
T25849 1122-1123 -COMMA- denotes ,
T25848 1117-1122 NN denotes cells
T25847 1115-1116 NN denotes T
T25846 1113-1114 -COMMA- denotes ,
T25845 1109-1113 NN denotes mice
T25844 1094-1108 NN denotes gp130F759/F759
T25843 1090-1093 DT denotes the
T25842 1087-1089 IN denotes In
T25841 1084-1085 -RRB- denotes ]
T25840 1082-1084 CD denotes 39
T25839 1081-1082 -LRB- denotes [
T25838 1067-1080 NN denotes phenylalanine
T25837 1064-1066 TO denotes to
T25836 1056-1063 VB denotes mutated
T25835 1052-1055 VB denotes was
T25834 1050-1051 -COMMA- denotes ,
T25833 1047-1050 CD denotes 759
T25832 1038-1046 NN denotes tyrosine
T25831 1036-1037 -COMMA- denotes ,
T25830 1035-1036 -RRB- denotes )
T25829 1027-1035 NN denotes receptor
T25828 1018-1026 NN denotes cytokine
T25827 1011-1017 NN denotes family
T25826 1006-1010 NN denotes IL-6
T25825 1002-1005 DT denotes the
T25824 999-1001 IN denotes of
T25823 991-998 NN denotes subunit
T25822 989-990 NN denotes β
T25821 976-988 NN denotes glycoprotein
T25820 962-975 NN denotes transmembrane
T25819 958-961 DT denotes the
T25818 957-958 -LRB- denotes (
T25817 951-956 NN denotes gp130
T25816 948-950 IN denotes of
T25815 943-947 NN denotes site
T25814 935-942 NN denotes binding
T25813 921-934 NN denotes phosphatase-2
T25812 912-920 NN denotes homology
T25811 908-911 NN denotes Src
T25810 904-907 DT denotes the
T25809 898-903 WDT denotes which
T25808 895-897 IN denotes in
T25807 893-894 -COMMA- denotes ,
T25806 889-893 NN denotes mice
T25805 874-888 NN denotes gp130F759/F759
T25804 870-873 DT denotes the
T25803 867-869 IN denotes of
T25802 859-866 NN denotes studies
T25801 856-858 IN denotes by
T25800 846-855 VB denotes suggested
T25799 841-845 VB denotes been
T25798 837-840 VB denotes has
T25797 827-836 NN denotes arthritis
T25796 816-826 JJ denotes autoimmune
T25795 797-815 JJ denotes Th1-cell-dominated
T25790 764-766 IN denotes of
T25789 751-763 NN denotes significance
T25788 747-750 DT denotes the
T25787 745-746 -COMMA- denotes ,
T25786 734-745 RB denotes Furthermore
T25785 731-732 -RRB- denotes ]
T25784 729-731 CD denotes 38
T25783 728-729 -LRB- denotes [
T25782 716-727 NN denotes fibroblasts
T25781 707-715 JJ denotes synovial
T25780 690-706 JJ denotes factor-dependent
T25779 683-689 NN denotes growth
T25778 680-682 IN denotes of
T25777 670-679 NN denotes expansion
T25776 666-669 CC denotes and
T25775 657-665 NN denotes survival
T25774 653-656 DT denotes the
T25773 650-652 IN denotes in
T25772 641-649 JJ denotes critical
T25771 638-640 VB denotes is
T25770 632-637 NN denotes STAT3
T25769 630-631 -COMMA- denotes ,
T25768 624-630 NN denotes regard
T25767 619-623 DT denotes this
T25766 616-618 IN denotes In
T25765 613-614 -RRB- denotes ]
T25764 611-613 CD denotes 37
T25763 610-611 -LRB- denotes [
T25762 599-609 NN denotes production
T25761 594-598 NN denotes IL-6
T25760 590-593 CC denotes and
T25759 576-589 NN denotes proliferation
T25758 565-575 NN denotes fibroblast
T25757 556-564 JJ denotes synovial
T25756 553-555 IN denotes in
T25755 544-552 VB denotes involved
T25754 541-543 VB denotes be
T25753 538-540 TO denotes to
T25752 532-537 VB denotes shown
T25751 527-531 VB denotes been
T25750 523-526 VB denotes has
T25749 512-522 NN denotes activation
T25748 506-511 NN denotes STAT3
T25747 502-505 CC denotes and
T25746 500-501 -COMMA- denotes ,
T25745 498-500 NN denotes ST
T25744 494-497 DT denotes the
T25743 491-493 IN denotes in
T25742 482-490 VB denotes detected
T25741 477-481 VB denotes been
T25740 472-476 VB denotes have
T25739 470-471 -COMMA- denotes ,
T25738 466-470 NN denotes IL-6
T25737 463-465 IN denotes by
T25736 456-462 RB denotes mainly
T25735 448-455 VB denotes induced
T25734 445-447 VB denotes be
T25733 442-444 TO denotes to
T25732 434-441 VB denotes thought
T25731 432-433 -COMMA- denotes ,
T25730 427-432 NN denotes STAT3
T25729 417-426 VB denotes activated
T25728 414-416 IN denotes of
T25727 407-413 NN denotes levels
T25726 402-406 JJ denotes high
T25725 400-401 -COMMA- denotes ,
T25724 392-400 RB denotes recently
T25723 387-391 RB denotes More
T25722 384-385 -RRB- denotes ]
T25721 382-384 CD denotes 31
T25720 381-382 -LRB- denotes [
T25719 374-380 NN denotes HLA-DR
T25718 371-373 IN denotes of
T25717 367-370 CC denotes and
T25716 363-366 CD denotes III
T25715 358-362 NN denotes type
T25714 354-357 CC denotes and
T25713 352-353 CD denotes I
T25712 347-351 NN denotes type
T25711 338-346 NN denotes receptor
T25710 332-337 NN denotes gamma
T25709 329-331 NN denotes Fc
T25708 325-328 DT denotes the
T25707 322-324 IN denotes of
T25706 311-321 NN denotes expression
T25705 306-310 NN denotes gene
T25704 303-305 IN denotes as
T25703 298-302 JJ denotes such
T25702 288-297 NN denotes functions
T25701 279-287 NN denotes monocyte
T25700 276-278 IN denotes of
T25699 265-275 NN denotes activation
T25698 261-264 DT denotes the
T25697 258-260 IN denotes in
T25696 253-257 NN denotes role
T25695 245-252 JJ denotes crucial
T25694 243-244 DT denotes a
T25693 239-242 VB denotes has
T25692 233-238 WDT denotes which
T25691 231-232 -COMMA- denotes ,
T25690 226-231 NN denotes fluid
T25689 217-225 JJ denotes synovial
T25688 214-216 IN denotes in
T25687 206-213 JJ denotes present
T25686 199-205 NN denotes factor
T25685 182-198 JJ denotes STAT3-activating
T25684 176-181 JJ denotes major
T25683 172-175 DT denotes the
T25682 169-171 VB denotes is
T25681 164-168 NN denotes IL-6
T25680 161-162 -RRB- denotes ]
T25679 159-161 CD denotes 36
T25678 158-159 -LRB- denotes [
T25677 149-157 NN denotes patients
T25676 146-148 NN denotes RA
T25675 141-145 IN denotes from
T25674 135-140 NN denotes cells
T25673 123-134 JJ denotes mononuclear
T25672 117-122 NN denotes fluid
T25671 108-116 JJ denotes synovial
T25670 105-107 IN denotes in
T25669 95-104 VB denotes expressed
T25668 80-94 RB denotes constitutively
T25667 77-79 VB denotes is
T25666 71-76 NN denotes STAT3
T25665 64-70 JJ denotes Active
T25664 60-62 NN denotes RA
T25663 57-59 IN denotes of
T25662 44-56 NN denotes pathogenesis
T25661 40-43 DT denotes the
T25660 37-39 IN denotes in
T25659 26-36 VB denotes implicated
T25658 21-25 VB denotes been
T25657 17-20 VB denotes has
T25656 6-16 NN denotes activation
T25655 0-5 NN denotes STAT3
T25794 794-796 IN denotes in
T25793 784-793 NN denotes signaling
T25792 778-783 NN denotes STAT3
T25791 767-777 JJ denotes persistent
R12696 T25677 T25675 arg2Of patients,from
R12706 T25677 T25676 arg1Of patients,RA
R12707 T25677 T25678 arg1Of patients,[
R12714 T25679 T25678 arg2Of 36,[
R12716 T25680 T25678 arg3Of ],[
R12722 T25681 T25682 arg1Of IL-6,is
R12725 T25686 T25682 arg2Of factor,is
R12734 T25686 T25683 arg1Of factor,the
R12738 T25686 T25684 arg1Of factor,major
R12743 T25686 T25685 arg1Of factor,STAT3-activating
R12744 T25686 T25687 arg1Of factor,present
R12745 T25686 T25691 arg1Of factor,","
R12747 T25686 T25692 arg1Of factor,which
R12749 T25686 T25693 arg1Of factor,has
R12750 T25687 T25688 arg1Of present,in
R12751 T25656 T25655 arg1Of activation,STAT3
R12752 T25690 T25688 arg2Of fluid,in
R12753 T25656 T25657 arg1Of activation,has
R12754 T25656 T25658 arg1Of activation,been
R12755 T25656 T25659 arg2Of activation,implicated
R12756 T25659 T25657 arg2Of implicated,has
R12757 T25659 T25658 arg2Of implicated,been
R12758 T25659 T25660 arg1Of implicated,in
R12759 T25690 T25689 arg1Of fluid,synovial
R12760 T25662 T25660 arg2Of pathogenesis,in
R12761 T25662 T25661 arg1Of pathogenesis,the
R12762 T25662 T25663 arg1Of pathogenesis,of
R12763 T25664 T25663 arg2Of RA,of
R12764 T25666 T25665 arg1Of STAT3,Active
R12765 T25666 T25667 arg1Of STAT3,is
R12766 T25666 T25669 arg2Of STAT3,expressed
R12767 T25693 T25697 arg1Of has,in
R12768 T25669 T25667 arg2Of expressed,is
R12769 T25669 T25668 arg1Of expressed,constitutively
R12770 T25669 T25670 arg1Of expressed,in
R12771 T25696 T25693 arg2Of role,has
R12772 T25674 T25670 arg2Of cells,in
R12773 T25674 T25671 arg1Of cells,synovial
R12774 T25674 T25672 arg1Of cells,fluid
R12775 T25674 T25673 arg1Of cells,mononuclear
R12776 T25674 T25675 arg1Of cells,from
R12777 T25696 T25694 arg1Of role,a
R12778 T25696 T25695 arg1Of role,crucial
R12779 T25699 T25697 arg2Of activation,in
R12780 T25699 T25698 arg1Of activation,the
R12781 T25699 T25700 arg1Of activation,of
R12782 T25702 T25700 arg2Of functions,of
R12783 T25775 T25776 arg1Of survival,and
R12784 T25776 T25773 arg2Of and,in
R12785 T25776 T25774 arg1Of and,the
R12786 T25776 T25778 arg1Of and,of
R12787 T25702 T25701 arg1Of functions,monocyte
R12788 T25777 T25776 arg2Of expansion,and
R12789 T25702 T25704 arg1Of functions,as
R12790 T25704 T25703 arg1Of as,such
R12791 T25782 T25778 arg2Of fibroblasts,of
R12792 T25782 T25779 arg1Of fibroblasts,growth
R12793 T25782 T25780 arg1Of fibroblasts,factor-dependent
R12794 T25782 T25781 arg1Of fibroblasts,synovial
R12795 T25706 T25704 arg2Of expression,as
R12796 T25784 T25783 arg2Of 38,[
R12797 T25785 T25783 arg3Of ],[
R12798 T25706 T25705 arg1Of expression,gene
R12799 T25706 T25707 arg1Of expression,of
R12800 T25706 T25718 arg1Of expression,of
R12801 T25789 T25788 arg1Of significance,the
R12802 T25789 T25790 arg1Of significance,of
R12803 T25789 T25794 arg1Of significance,in
R12804 T25789 T25798 arg1Of significance,has
R12805 T25789 T25799 arg1Of significance,been
R12806 T25789 T25800 arg2Of significance,suggested
R12807 T25707 T25717 arg1Of of,and
R12808 T25793 T25790 arg2Of signaling,of
R12809 T25793 T25791 arg1Of signaling,persistent
R12810 T25793 T25792 arg1Of signaling,STAT3
R12811 T25797 T25794 arg2Of arthritis,in
R12812 T25797 T25795 arg1Of arthritis,Th1-cell-dominated
R12813 T25797 T25796 arg1Of arthritis,autoimmune
R12814 T25712 T25709 arg1Of type,Fc
R12815 T25800 T25786 arg1Of suggested,Furthermore
R12816 T25800 T25787 arg1Of suggested,","
R12817 T25800 T25798 arg2Of suggested,has
R12818 T25800 T25799 arg2Of suggested,been
R12819 T25802 T25800 arg1Of studies,suggested
R12820 T25802 T25801 arg2Of studies,by
R12821 T25802 T25803 arg1Of studies,of
R12822 T25802 T25807 arg1Of studies,","
R12823 T25802 T25808 arg2Of studies,in
R12824 T25802 T25809 arg1Of studies,which
R12825 T25806 T25803 arg2Of mice,of
R12826 T25806 T25804 arg1Of mice,the
R12827 T25806 T25805 arg1Of mice,gp130F759/F759
R12828 T25712 T25710 arg1Of type,gamma
R12829 T25712 T25711 arg1Of type,receptor
R12830 T25712 T25713 arg1Of type,I
R12831 T25712 T25714 arg1Of type,and
R12832 T25714 T25707 arg2Of and,of
R12833 T25815 T25811 arg1Of site,Src
R12834 T25815 T25812 arg1Of site,homology
R12835 T25815 T25813 arg1Of site,phosphatase-2
R12836 T25815 T25814 arg1Of site,binding
R12837 T25815 T25816 arg1Of site,of
R12838 T25815 T25831 arg1Of site,","
R12839 T25817 T25816 arg2Of gp130,of
R12840 T25817 T25818 arg1Of gp130,(
R12841 T25714 T25708 arg1Of and,the
R12842 T25715 T25714 arg2Of type,and
R12843 T25823 T25818 arg2Of subunit,(
R12844 T25823 T25819 arg1Of subunit,the
R12845 T25823 T25820 arg1Of subunit,transmembrane
R12846 T25823 T25821 arg1Of subunit,glycoprotein
R12847 T25823 T25822 arg1Of subunit,β
R12848 T25823 T25824 arg1Of subunit,of
R12849 T25715 T25716 arg1Of type,III
R12850 T25718 T25717 arg2Of of,and
R12851 T25829 T25824 arg2Of receptor,of
R12852 T25829 T25825 arg1Of receptor,the
R12853 T25829 T25826 arg1Of receptor,IL-6
R12854 T25829 T25827 arg1Of receptor,family
R12855 T25829 T25828 arg1Of receptor,cytokine
R12856 T25830 T25818 arg3Of ),(
R12857 T25831 T25810 arg1Of ",",the
R12858 T25831 T25835 arg1Of ",",was
R12859 T25831 T25836 arg2Of ",",mutated
R12860 T25832 T25831 arg2Of tyrosine,","
R12861 T25832 T25833 arg1Of tyrosine,759
R12862 T25836 T25808 arg1Of mutated,in
R12863 T25836 T25834 arg1Of mutated,","
R12864 T25836 T25835 arg2Of mutated,was
R12865 T25836 T25837 arg1Of mutated,to
R12866 T25838 T25837 arg2Of phenylalanine,to
R12867 T25838 T25839 arg1Of phenylalanine,[
R12868 T25719 T25718 arg2Of HLA-DR,of
R12869 T25840 T25839 arg2Of 39,[
R12870 T25841 T25839 arg3Of ],[
R12871 T25719 T25720 arg1Of HLA-DR,[
R12872 T25721 T25720 arg2Of 31,[
R12873 T25845 T25842 arg2Of mice,In
R12874 T25845 T25843 arg1Of mice,the
R12875 T25845 T25844 arg1Of mice,gp130F759/F759
R12876 T25722 T25720 arg3Of ],[
R12877 T25724 T25723 arg1Of recently,More
R12878 T25848 T25847 arg1Of cells,T
R12879 T25848 T25849 arg1Of cells,","
R12880 T25849 T25856 arg1Of ",",are
R12881 T25849 T25858 arg2Of ",",activated
R12882 T25849 T25860 arg1Of ",",resistant
R12883 T25727 T25726 arg1Of levels,high
R12884 T25854 T25849 arg2Of subset,","
R12885 T25854 T25850 arg1Of subset,particularly
R12886 T25854 T25851 arg1Of subset,the
R12887 T25854 T25852 arg1Of subset,CD4+
R12888 T25854 T25853 arg1Of subset,T-cell
R12889 T25727 T25728 arg1Of levels,of
R12890 T25858 T25859 arg1Of activated,and
R12891 T25859 T25842 arg1Of and,In
R12892 T25859 T25846 arg1Of and,","
R12893 T25859 T25855 arg1Of and,","
R12894 T25859 T25856 arg2Of and,are
R12895 T25859 T25857 arg1Of and,chronically
R12896 T25859 T25865 arg1Of and,through
R12897 T25860 T25859 arg2Of resistant,and
R12898 T25860 T25861 arg1Of resistant,to
R12899 T25727 T25731 arg1Of levels,","
R12900 T25727 T25732 arg2Of levels,thought
R12901 T25727 T25734 arg1Of levels,be
R12902 T25864 T25861 arg2Of death,to
R12903 T25864 T25862 arg1Of death,activation-induced
R12904 T25864 T25863 arg1Of death,cell
R12905 T25727 T25735 arg2Of levels,induced
R12906 T25727 T25740 arg1Of levels,have
R12907 T25727 T25741 arg1Of levels,been
R12908 T25868 T25865 arg2Of activation,through
R12909 T25868 T25866 arg1Of activation,gp130-mediated
R12910 T25868 T25867 arg1Of activation,STAT3
R12911 T25727 T25742 arg2Of levels,detected
R12912 T25730 T25728 arg2Of STAT3,of
R12920 T25730 T25729 arg2Of STAT3,activated
R12921 T25735 T25732 arg3Of induced,thought
R12927 T25735 T25733 arg1Of induced,to
R12928 T25735 T25734 arg2Of induced,be
R12929 T25735 T25737 arg1Of induced,by
R12938 T25737 T25736 arg1Of by,mainly
R12940 T25738 T25737 arg2Of IL-6,by
R12945 T25742 T25739 arg1Of detected,","
R12958 T25742 T25740 arg2Of detected,have
R12959 T25742 T25741 arg2Of detected,been
R12966 T25742 T25743 arg1Of detected,in
R12967 T25742 T25747 arg1Of detected,and
R12968 T25745 T25743 arg2Of ST,in
R12973 T25745 T25744 arg1Of ST,the
R12975 T25747 T25724 arg1Of and,recently
R12981 T25747 T25725 arg1Of and,","
R12982 T25747 T25746 arg1Of and,","
R12984 T25749 T25748 arg1Of activation,STAT3
R12988 T25749 T25750 arg1Of activation,has
R12990 T25749 T25751 arg1Of activation,been
R12992 T25749 T25752 arg2Of activation,shown
R12995 T25749 T25754 arg1Of activation,be
R12998 T25749 T25755 arg2Of activation,involved
R13002 T25752 T25747 arg2Of shown,and
R13006 T25752 T25750 arg2Of shown,has
R13007 T25752 T25751 arg2Of shown,been
R13008 T25755 T25752 arg3Of involved,shown
R13023 T25755 T25753 arg1Of involved,to
R13026 T25755 T25754 arg2Of involved,be
R13028 T25755 T25756 arg1Of involved,in
R13033 T25759 T25757 arg1Of proliferation,synovial
R13042 T25759 T25758 arg1Of proliferation,fibroblast
R13043 T25759 T25760 arg1Of proliferation,and
R13044 T25760 T25756 arg2Of and,in
R13045 T25762 T25760 arg2Of production,and
R13046 T25762 T25761 arg1Of production,IL-6
R13047 T25762 T25763 arg1Of production,[
R13048 T25764 T25763 arg2Of 37,[
R13052 T25765 T25763 arg3Of ],[
R13054 T25768 T25766 arg2Of regard,In
R13069 T25768 T25767 arg1Of regard,this
R13070 T25770 T25771 arg1Of STAT3,is
R13074 T25770 T25772 arg1Of STAT3,critical
R13078 T25771 T25766 arg1Of is,In
R13081 T25771 T25769 arg1Of is,","
R13083 T25771 T25783 arg1Of is,[
R13086 T25772 T25771 arg2Of critical,is
R13089 T25772 T25773 arg1Of critical,in

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T23333 164-168 Antecedent denotes IL-6
T23332 199-205 Anaphor denotes factor
R11376 T23332 T23333 boundBy factor,IL-6

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T23483 1257-1262 Protein denotes STAT3
T23482 1242-1247 Protein denotes gp130
T23481 1141-1144 Protein denotes CD4
T23480 1094-1099 Protein denotes gp130
T23479 962-1035 Protein denotes transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor
T23478 951-956 Protein denotes gp130
T23477 874-879 Protein denotes gp130
T23476 778-783 Protein denotes STAT3
T23475 632-637 Protein denotes STAT3
T23474 594-598 Protein denotes IL-6
T23473 506-511 Protein denotes STAT3
T23472 466-470 Protein denotes IL-6
T23471 427-432 Protein denotes STAT3
T23470 358-366 Protein denotes type III
T23469 329-353 Protein denotes Fc gamma receptor type I
T23468 182-187 Protein denotes STAT3
T23467 164-168 Protein denotes IL-6
T23466 71-76 Protein denotes STAT3
T23465 0-5 Protein denotes STAT3

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T26432 1006-1010 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T26431 594-598 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T26430 466-470 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T26429 164-168 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T26414 1257-1262 http://www.uniprot.org/uniprot/P40763 denotes STAT3
T26413 778-783 http://www.uniprot.org/uniprot/P40763 denotes STAT3
T26412 632-637 http://www.uniprot.org/uniprot/P40763 denotes STAT3
T26411 506-511 http://www.uniprot.org/uniprot/P40763 denotes STAT3
T26410 427-432 http://www.uniprot.org/uniprot/P40763 denotes STAT3
T26409 182-187 http://www.uniprot.org/uniprot/P40763 denotes STAT3
T26408 71-76 http://www.uniprot.org/uniprot/P40763 denotes STAT3
T26407 0-5 http://www.uniprot.org/uniprot/P40763 denotes STAT3
T24255 1141-1144 http://www.uniprot.org/uniprot/P01730 denotes CD4

UBERON-AE

Id Subject Object Predicate Lexical cue
T22790 217-231 http://purl.obolibrary.org/obo/UBERON_0001090 denotes synovial fluid
T22789 108-122 http://purl.obolibrary.org/obo/UBERON_0001090 denotes synovial fluid

GO-BP

Id Subject Object Predicate Lexical cue
T22932 1228-1233 http://purl.obolibrary.org/obo/GO_0016265 denotes death
T22931 1223-1233 http://purl.obolibrary.org/obo/GO_0008219 denotes cell death
T22930 1204-1233 http://purl.obolibrary.org/obo/GO_2000109 denotes activation-induced cell death
T22929 1204-1233 http://purl.obolibrary.org/obo/GO_0071888 denotes activation-induced cell death
T22927 1242-1247 http://purl.obolibrary.org/obo/GO_0004921 denotes gp130
T22926 951-956 http://purl.obolibrary.org/obo/GO_0004921 denotes gp130
T22924 1242-1247 http://purl.obolibrary.org/obo/GO_0004915 denotes gp130
T22923 951-956 http://purl.obolibrary.org/obo/GO_0004915 denotes gp130
T22921 1242-1247 http://purl.obolibrary.org/obo/GO_0004897 denotes gp130
T22920 951-956 http://purl.obolibrary.org/obo/GO_0004897 denotes gp130
T22918 921-932 http://purl.obolibrary.org/obo/GO_0016791 denotes phosphatase
T22917 594-609 http://purl.obolibrary.org/obo/GO_0032675 denotes IL-6 production
T22916 594-609 http://purl.obolibrary.org/obo/GO_0032635 denotes IL-6 production
T22915 565-589 http://purl.obolibrary.org/obo/GO_0048144 denotes fibroblast proliferation
T22914 306-321 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression
T22913 265-287 http://purl.obolibrary.org/obo/GO_0042117 denotes activation of monocyte
T22912 44-56 http://purl.obolibrary.org/obo/GO_0009405 denotes pathogenesis
T22906 683-689 http://purl.obolibrary.org/obo/GO_0040007 denotes growth

GO-CC

Id Subject Object Predicate Lexical cue
T23694 962-975 http://purl.obolibrary.org/obo/GO_0044214 denotes transmembrane
T23693 962-975 http://purl.obolibrary.org/obo/GO_0016021 denotes transmembrane
T23678 1117-1122 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T23677 135-140 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T23634 1242-1247 http://purl.obolibrary.org/obo/GO_0004921 denotes gp130
T23633 951-956 http://purl.obolibrary.org/obo/GO_0004921 denotes gp130
T23631 1242-1247 http://purl.obolibrary.org/obo/GO_0004915 denotes gp130
T23630 951-956 http://purl.obolibrary.org/obo/GO_0004915 denotes gp130
T23628 1242-1247 http://purl.obolibrary.org/obo/GO_0004897 denotes gp130
T23627 951-956 http://purl.obolibrary.org/obo/GO_0004897 denotes gp130
T23625 921-932 http://purl.obolibrary.org/obo/GO_0016791 denotes phosphatase
T23614 1006-1010 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T23613 594-598 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T23612 466-470 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T23611 164-168 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T23549 935-942 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T22840 1087-1274 Sentence denotes In the gp130F759/F759 mice, T cells, particularly the CD4+ T-cell subset, are chronically activated and resistant to activation-induced cell death through gp130-mediated STAT3 activation.
T22839 734-1086 Sentence denotes Furthermore, the significance of persistent STAT3 signaling in Th1-cell-dominated autoimmune arthritis has been suggested by studies of the gp130F759/F759 mice, in which the Src homology phosphatase-2 binding site of gp130 (the transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor), tyrosine 759, was mutated to phenylalanine [39].
T22838 616-733 Sentence denotes In this regard, STAT3 is critical in the survival and expansion of growth factor-dependent synovial fibroblasts [38].
T22837 387-615 Sentence denotes More recently, high levels of activated STAT3, thought to be induced mainly by IL-6, have been detected in the ST, and STAT3 activation has been shown to be involved in synovial fibroblast proliferation and IL-6 production [37].
T22836 164-386 Sentence denotes IL-6 is the major STAT3-activating factor present in synovial fluid, which has a crucial role in the activation of monocyte functions such as gene expression of the Fc gamma receptor type I and type III and of HLA-DR [31].
T22835 64-163 Sentence denotes Active STAT3 is constitutively expressed in synovial fluid mononuclear cells from RA patients [36].
T22834 0-63 Sentence denotes STAT3 activation has been implicated in the pathogenesis of RA.
T177 0-63 Sentence denotes STAT3 activation has been implicated in the pathogenesis of RA.
T178 64-163 Sentence denotes Active STAT3 is constitutively expressed in synovial fluid mononuclear cells from RA patients [36].
T179 164-386 Sentence denotes IL-6 is the major STAT3-activating factor present in synovial fluid, which has a crucial role in the activation of monocyte functions such as gene expression of the Fc gamma receptor type I and type III and of HLA-DR [31].
T180 387-615 Sentence denotes More recently, high levels of activated STAT3, thought to be induced mainly by IL-6, have been detected in the ST, and STAT3 activation has been shown to be involved in synovial fibroblast proliferation and IL-6 production [37].
T181 616-733 Sentence denotes In this regard, STAT3 is critical in the survival and expansion of growth factor-dependent synovial fibroblasts [38].
T182 734-1086 Sentence denotes Furthermore, the significance of persistent STAT3 signaling in Th1-cell-dominated autoimmune arthritis has been suggested by studies of the gp130F759/F759 mice, in which the Src homology phosphatase-2 binding site of gp130 (the transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor), tyrosine 759, was mutated to phenylalanine [39].
T183 1087-1274 Sentence denotes In the gp130F759/F759 mice, T cells, particularly the CD4+ T-cell subset, are chronically activated and resistant to activation-induced cell death through gp130-mediated STAT3 activation.

ICD10

Id Subject Object Predicate Lexical cue
T23695 827-836 http://purl.bioontology.org/ontology/ICD10/M13.9 denotes arthritis

simple1

Id Subject Object Predicate Lexical cue
T24425 1257-1262 Protein denotes STAT3
T24424 1242-1247 Protein denotes gp130
T24423 1141-1144 Protein denotes CD4
T24422 1094-1099 Protein denotes gp130
T24421 962-1035 Protein denotes transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor
T24420 951-956 Protein denotes gp130
T24419 874-879 Protein denotes gp130
T24418 778-783 Protein denotes STAT3
T24417 632-637 Protein denotes STAT3
T24416 594-598 Protein denotes IL-6
T24415 506-511 Protein denotes STAT3
T24414 466-470 Protein denotes IL-6
T24413 427-432 Protein denotes STAT3
T24412 358-366 Protein denotes type III
T24411 329-353 Protein denotes Fc gamma receptor type I
T24410 182-187 Protein denotes STAT3
T24409 164-168 Protein denotes IL-6
T24408 71-76 Protein denotes STAT3
T24407 0-5 Protein denotes STAT3

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T30259 1257-1262 Protein denotes STAT3
T30258 1242-1247 Protein denotes gp130
T30257 1141-1144 Protein denotes CD4
T30256 1094-1099 Protein denotes gp130
T30255 962-1035 Protein denotes transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor
T30254 951-956 Protein denotes gp130
T30253 874-879 Protein denotes gp130
T30252 778-783 Protein denotes STAT3
T30251 632-637 Protein denotes STAT3
T30250 594-598 Protein denotes IL-6
T30249 506-511 Protein denotes STAT3
T30248 466-470 Protein denotes IL-6
T30247 427-432 Protein denotes STAT3
T30246 358-366 Protein denotes type III
T30245 329-353 Protein denotes Fc gamma receptor type I
T30244 182-187 Protein denotes STAT3
T30243 164-168 Protein denotes IL-6
T30242 71-76 Protein denotes STAT3
T30241 0-5 Protein denotes STAT3
T30387 1263-1273 Positive_regulation denotes activation
T30386 599-609 Gene_expression denotes production
T30385 512-522 Positive_regulation denotes activation
T30384 448-455 Positive_regulation denotes induced
T30383 417-426 Positive_regulation denotes activated
T30382 265-275 Positive_regulation denotes activation
T30381 311-321 Gene_expression denotes expression
T30380 95-104 Gene_expression denotes expressed
T30379 6-16 Positive_regulation denotes activation
R16091 T30241 T30379 themeOf STAT3,activation
R16096 T30242 T30380 themeOf STAT3,expressed
R16097 T30245 T30381 themeOf Fc gamma receptor type I,expression
R16098 T30246 T30381 themeOf type III,expression
R16101 T30247 T30383 themeOf STAT3,activated
R16102 T30247 T30384 themeOf STAT3,induced
R16104 T30248 T30384 causeOf IL-6,induced
R16105 T30249 T30385 themeOf STAT3,activation
R16107 T30250 T30386 themeOf IL-6,production
R16109 T30259 T30387 themeOf STAT3,activation
R16190 T30381 T30382 themeOf expression,activation
R16191 T30381 T30382 themeOf expression,activation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T26757 1248-1256 Positive_regulation denotes mediated
T26756 1263-1273 Positive_regulation denotes activation
T26755 512-522 Positive_regulation denotes activation
T26754 599-609 Gene_expression denotes production
T26753 544-552 Positive_regulation denotes involved
T26615 1257-1262 Protein denotes STAT3
T26614 1242-1247 Protein denotes gp130
T26613 1141-1144 Protein denotes CD4
T26612 1094-1099 Protein denotes gp130
T26611 962-1035 Protein denotes transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor
T26610 951-956 Protein denotes gp130
T26609 874-879 Protein denotes gp130
T26608 778-783 Protein denotes STAT3
T26607 632-637 Protein denotes STAT3
T26606 594-598 Protein denotes IL-6
T26605 506-511 Protein denotes STAT3
T26604 466-470 Protein denotes IL-6
T26603 427-432 Protein denotes STAT3
T26602 358-366 Protein denotes type III
T26601 329-353 Protein denotes Fc gamma receptor type I
T26600 182-187 Protein denotes STAT3
T26599 164-168 Protein denotes IL-6
T26598 71-76 Protein denotes STAT3
T26597 0-5 Protein denotes STAT3
T26752 448-455 Positive_regulation denotes induced
T26751 417-426 Positive_regulation denotes activated
T26750 311-321 Gene_expression denotes expression
T26749 95-104 Gene_expression denotes expressed
T26748 6-16 Positive_regulation denotes activation
R13505 T26597 T26748 themeOf STAT3,activation
R13507 T26598 T26749 themeOf STAT3,expressed
R13509 T26601 T26750 themeOf Fc gamma receptor type I,expression
R13511 T26602 T26750 themeOf type III,expression
R13513 T26603 T26751 themeOf STAT3,activated
R13514 T26603 T26752 themeOf STAT3,induced
R13516 T26604 T26752 causeOf IL-6,induced
R13518 T26605 T26755 themeOf STAT3,activation
R13519 T26606 T26754 themeOf IL-6,production
R13524 T26615 T26756 themeOf STAT3,activation
R13574 T26754 T26753 themeOf production,involved
R13575 T26756 T26757 themeOf activation,mediated

DLUT931

Id Subject Object Predicate Lexical cue
T28709 1257-1262 Protein denotes STAT3
T28708 1242-1247 Protein denotes gp130
T28707 1141-1144 Protein denotes CD4
T28706 1094-1099 Protein denotes gp130
T28705 962-1035 Protein denotes transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor
T28704 951-956 Protein denotes gp130
T28703 874-879 Protein denotes gp130
T28702 778-783 Protein denotes STAT3
T28701 632-637 Protein denotes STAT3
T28700 594-598 Protein denotes IL-6
T28699 506-511 Protein denotes STAT3
T28698 466-470 Protein denotes IL-6
T28697 427-432 Protein denotes STAT3
T28696 358-366 Protein denotes type III
T28695 329-353 Protein denotes Fc gamma receptor type I
T28694 182-187 Protein denotes STAT3
T28693 164-168 Protein denotes IL-6
T28692 71-76 Protein denotes STAT3
T28691 0-5 Protein denotes STAT3
T28851 1263-1273 Positive_regulation denotes activation
T28850 1177-1186 Positive_regulation denotes activated
T28849 935-942 Binding denotes binding
T28848 544-552 Positive_regulation denotes involved
T28847 599-609 Gene_expression denotes production
T28846 512-522 Positive_regulation denotes activation
T28845 448-455 Positive_regulation denotes induced
T28844 417-426 Positive_regulation denotes activated
T28843 311-321 Gene_expression denotes expression
T28842 188-198 Positive_regulation denotes activating
T28841 95-104 Gene_expression denotes expressed
T28840 6-16 Positive_regulation denotes activation
T28853 1248-1256 Positive_regulation denotes mediated
T28852 1204-1222 Positive_regulation denotes activation-induced
R15437 T28691 T28840 themeOf STAT3,activation
R15438 T28692 T28841 themeOf STAT3,expressed
R15442 T28693 T28842 themeOf IL-6,activating
R15444 T28694 T28842 causeOf STAT3,activating
R15446 T28695 T28843 themeOf Fc gamma receptor type I,expression
R15448 T28696 T28843 themeOf type III,expression
R15451 T28697 T28844 themeOf STAT3,activated
R15452 T28697 T28845 themeOf STAT3,induced
R15455 T28698 T28845 causeOf IL-6,induced
R15457 T28699 T28846 themeOf STAT3,activation
R15460 T28700 T28847 themeOf IL-6,production
R15462 T28703 T28849 themeOf gp130,binding
R15464 T28703 T28849 themeOf gp130,binding
R15467 T28704 T28849 themeOf gp130,binding
R15468 T28704 T28849 themeOf gp130,binding
R15470 T28705 T28849 themeOf transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor,binding
R15475 T28705 T28849 themeOf transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor,binding
R15476 T28706 T28850 themeOf gp130,activated
R15478 T28708 T28853 causeOf gp130,mediated
R15482 T28709 T28851 themeOf STAT3,activation
R15509 T28846 T28848 causeOf activation,involved
R15510 T28847 T28848 themeOf production,involved
R15512 T28851 T28852 themeOf activation,activation-induced
R15513 T28851 T28853 themeOf activation,mediated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T30107 1242-1273 Positive_regulation denotes gp130-mediated STAT3 activation
T30104 506-614 Positive_regulation denotes STAT3 activation has been shown to be involved in synovial fibroblast proliferation and IL-6 production [37]
T30101 0-16 Positive_regulation denotes STAT3 activation
T30100 1242-1273 Regulation denotes gp130-mediated STAT3 activation
T30087 778-815 Positive_regulation denotes STAT3 signaling in Th1-cell-dominated
T30056 276-366 Gene_expression denotes of monocyte functions such as gene expression of the Fc gamma receptor type I and type III
T30055 276-366 Gene_expression denotes of monocyte functions such as gene expression of the Fc gamma receptor type I and type III
T30053 64-162 Gene_expression denotes Active STAT3 is constitutively expressed in synovial fluid mononuclear cells from RA patients [36]
T30036 594-614 Gene_expression denotes IL-6 production [37]
T30012 1067-1085 Entity denotes phenylalanine [39]
T30011 680-732 Entity denotes of growth factor-dependent synovial fibroblasts [38]
T29976 506-511 Protein denotes STAT3
T29950 1038-1050 Entity denotes tyrosine 759
T29944 594-598 Protein denotes IL-6
T29940 0-5 Protein denotes STAT3
T29935 908-911 Protein denotes Src
T29917 494-500 Protein denotes the ST
T29911 867-894 Protein denotes of the gp130F759/F759 mice,
T29801 64-76 Protein denotes Active STAT3
T29796 632-637 Protein denotes STAT3
T29710 921-932 Protein denotes phosphatase
T29694 427-432 Protein denotes STAT3
T29692 466-471 Protein denotes IL-6,
T29902 1146-1152 Entity denotes T-cell
T29891 164-168 Protein denotes IL-6
T29680 778-783 Protein denotes STAT3
T29743 958-1035 Protein denotes the transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor
T29735 279-287 Entity denotes monocyte
T29724 1109-1123 Protein denotes mice, T cells,
T29723 108-140 Entity denotes synovial fluid mononuclear cells
T29771 325-353 Protein denotes the Fc gamma receptor type I
T29765 1257-1262 Protein denotes STAT3
T29846 683-706 Protein denotes growth factor-dependent
T29838 1115-1122 Entity denotes T cells
T29837 358-366 Protein denotes type III
T29835 172-231 Protein denotes the major STAT3-activating factor present in synovial fluid
T29859 146-148 Protein denotes RA
T29881 1242-1256 Protein denotes gp130-mediated
T29874 948-1036 Protein denotes of gp130 (the transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor)
T29862 60-62 Protein denotes RA
R15946 T29680 T30087 causeOf STAT3,STAT3 signaling in Th1-cell-dominated
R15976 T29765 T30107 themeOf STAT3,gp130-mediated STAT3 activation
R15978 T29771 T30056 themeOf the Fc gamma receptor type I,of monocyte functions such as gene expression of the Fc gamma receptor type I and type III
R15985 T29837 T30055 themeOf type III,of monocyte functions such as gene expression of the Fc gamma receptor type I and type III
R15995 T29801 T30053 themeOf Active STAT3,Active STAT3 is constitutively expressed in synovial fluid mononuclear cells from RA patients [36]
R16005 T29881 T30100 causeOf gp130-mediated,gp130-mediated STAT3 activation
R16033 T29940 T30101 themeOf STAT3,STAT3 activation
R16039 T29944 T30036 themeOf IL-6,IL-6 production [37]
R16064 T29976 T30104 themeOf STAT3,STAT3 activation has been shown to be involved in synovial fibroblast proliferation and IL-6 production [37]
R16066 T30107 T30100 themeOf gp130-mediated STAT3 activation,gp130-mediated STAT3 activation

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T28249 1273-1274 . denotes .
T28248 1263-1273 NN denotes activation
T28247 1257-1262 CD denotes STAT3
T28246 1242-1256 JJ denotes gp130-mediated
T28245 1234-1241 IN denotes through
T28244 1228-1233 NN denotes death
T28243 1223-1227 NN denotes cell
T28242 1204-1222 JJ denotes activation-induced
T28241 1201-1203 TO denotes to
T28240 1191-1200 JJ denotes resistant
T28239 1187-1190 CC denotes and
T28238 1177-1186 VBN denotes activated
T28237 1165-1176 RB denotes chronically
T28236 1161-1164 VBP denotes are
T28235 1159-1160 , denotes ,
T28234 1153-1159 NN denotes subset
T28233 1146-1152 NNP denotes T-cell
T28232 1144-1145 NNP denotes +
T28231 1141-1144 NNP denotes CD4
T28230 1137-1140 DT denotes the
T28229 1124-1136 RB denotes particularly
T28228 1122-1123 , denotes ,
T28227 1117-1122 NNS denotes cells
T28226 1115-1116 NNP denotes T
T28225 1113-1114 , denotes ,
T28224 1109-1113 NNS denotes mice
T28223 1094-1108 NNP denotes gp130F759/F759
T28222 1090-1093 DT denotes the
T28221 1087-1089 IN denotes In
T28220 1085-1086 . denotes .
T28219 1084-1085 NNP denotes ]
T28218 1082-1084 CD denotes 39
T28217 1081-1082 NNP denotes [
T28216 1067-1080 VB denotes phenylalanine
T28215 1064-1066 TO denotes to
T28214 1056-1063 VBN denotes mutated
T28213 1052-1055 VBD denotes was
T28212 1050-1051 , denotes ,
T28211 1047-1050 CD denotes 759
T28210 1038-1046 JJ denotes tyrosine
T28209 1036-1037 , denotes ,
T28208 1035-1036 -RRB- denotes )
T28207 1027-1035 NN denotes receptor
T28206 1018-1026 NN denotes cytokine
T28205 1011-1017 NN denotes family
T28204 1006-1010 NNP denotes IL-6
T28203 1002-1005 DT denotes the
T28202 999-1001 IN denotes of
T28201 991-998 NN denotes subunit
T28200 989-990 NN denotes β
T28199 976-988 NN denotes glycoprotein
T28198 962-975 NN denotes transmembrane
T28197 958-961 DT denotes the
T28196 957-958 -LRB- denotes (
T28195 951-956 CD denotes gp130
T28194 948-950 IN denotes of
T28193 943-947 NN denotes site
T28192 935-942 JJ denotes binding
T28191 921-934 JJ denotes phosphatase-2
T28190 912-920 NN denotes homology
T28189 908-911 NNP denotes Src
T28188 904-907 DT denotes the
T28187 898-903 WDT denotes which
T28186 895-897 IN denotes in
T28185 893-894 , denotes ,
T28184 889-893 NNS denotes mice
T28183 874-888 NNP denotes gp130F759/F759
T28182 870-873 DT denotes the
T28181 867-869 IN denotes of
T28180 859-866 NNS denotes studies
T28179 856-858 IN denotes by
T28178 846-855 VBN denotes suggested
T28177 841-845 VBN denotes been
T28140 611-613 CD denotes 37
T28139 610-611 NNP denotes [
T28138 599-609 NN denotes production
T28137 594-598 NN denotes IL-6
T28136 590-593 CC denotes and
T28135 576-589 NN denotes proliferation
T28134 565-575 NN denotes fibroblast
T28133 556-564 JJ denotes synovial
T28132 553-555 IN denotes in
T28131 544-552 VBN denotes involved
T28130 541-543 VB denotes be
T28129 538-540 TO denotes to
T28128 532-537 VBN denotes shown
T28127 527-531 VBN denotes been
T28126 523-526 VBZ denotes has
T28125 512-522 NN denotes activation
T28124 506-511 NNP denotes STAT3
T28123 502-505 CC denotes and
T28122 500-501 , denotes ,
T28121 498-500 NNP denotes ST
T28120 494-497 DT denotes the
T28119 491-493 IN denotes in
T28118 482-490 VBN denotes detected
T28117 477-481 VBN denotes been
T28116 472-476 VBP denotes have
T28115 470-471 , denotes ,
T28114 466-470 NNP denotes IL-6
T28113 463-465 IN denotes by
T28112 456-462 RB denotes mainly
T28111 448-455 JJ denotes induced
T28110 445-447 VB denotes be
T28109 442-444 TO denotes to
T28108 434-441 VBD denotes thought
T28107 432-433 , denotes ,
T28106 427-432 NNP denotes STAT3
T28105 417-426 VBN denotes activated
T28104 414-416 IN denotes of
T28103 407-413 NNS denotes levels
T28102 402-406 JJ denotes high
T28101 400-401 , denotes ,
T28100 392-400 RB denotes recently
T28099 387-391 RBR denotes More
T28098 385-386 . denotes .
T28097 384-385 NNP denotes ]
T28096 382-384 CD denotes 31
T28095 381-382 NNP denotes [
T28094 374-380 NNP denotes HLA-DR
T28093 371-373 IN denotes of
T28092 367-370 CC denotes and
T28091 363-366 NNP denotes III
T28090 358-362 NN denotes type
T28089 354-357 CC denotes and
T28088 352-353 PRP denotes I
T28087 347-351 NN denotes type
T28086 338-346 NN denotes receptor
T28085 332-337 NN denotes gamma
T28084 329-331 NNP denotes Fc
T28083 325-328 DT denotes the
T28082 322-324 IN denotes of
T28081 311-321 NN denotes expression
T28080 306-310 NN denotes gene
T28079 303-305 IN denotes as
T28078 298-302 JJ denotes such
T28077 288-297 NNS denotes functions
T28076 279-287 NN denotes monocyte
T28075 276-278 IN denotes of
T28074 265-275 NN denotes activation
T28073 261-264 DT denotes the
T28072 258-260 IN denotes in
T28071 253-257 NN denotes role
T28070 245-252 JJ denotes crucial
T28069 243-244 DT denotes a
T28068 239-242 VBZ denotes has
T28067 233-238 WDT denotes which
T28066 231-232 , denotes ,
T28065 226-231 NN denotes fluid
T28064 217-225 JJ denotes synovial
T28063 214-216 IN denotes in
T28062 206-213 NN denotes present
T28061 199-205 NN denotes factor
T28060 182-198 JJ denotes STAT3-activating
T28059 176-181 JJ denotes major
T28058 172-175 DT denotes the
T28057 169-171 VBZ denotes is
T28056 164-168 NN denotes IL-6
T28055 162-163 . denotes .
T28054 161-162 NNP denotes ]
T28053 159-161 CD denotes 36
T28052 158-159 NNP denotes [
T28051 149-157 NNS denotes patients
T28050 146-148 NNP denotes RA
T28049 141-145 IN denotes from
T28048 135-140 NNS denotes cells
T28047 123-134 NN denotes mononuclear
T28046 117-122 NN denotes fluid
T28045 108-116 JJ denotes synovial
T28044 105-107 IN denotes in
T28043 95-104 VBN denotes expressed
T28042 80-94 RB denotes constitutively
T28041 77-79 VBZ denotes is
T28040 71-76 NNP denotes STAT3
T28039 64-70 JJ denotes Active
T28038 62-63 . denotes .
T28037 60-62 NNP denotes RA
T28036 57-59 IN denotes of
T28035 44-56 NN denotes pathogenesis
T28034 40-43 DT denotes the
T28033 37-39 IN denotes in
T28032 26-36 VBN denotes implicated
T28031 21-25 VBN denotes been
T28030 17-20 VBZ denotes has
T28029 6-16 NN denotes activation
T28028 0-5 CD denotes STAT3
T28161 729-731 CD denotes 38
T28160 728-729 NNP denotes [
T28159 716-727 NNS denotes fibroblasts
T28158 707-715 JJ denotes synovial
T28157 690-706 JJ denotes factor-dependent
T28156 683-689 NN denotes growth
T28155 680-682 IN denotes of
T28154 670-679 NN denotes expansion
T28153 666-669 CC denotes and
T28152 657-665 NN denotes survival
T28151 653-656 DT denotes the
T28150 650-652 IN denotes in
T28149 641-649 JJ denotes critical
T28148 638-640 VBZ denotes is
T28147 632-637 NNP denotes STAT3
T28146 630-631 , denotes ,
T28145 624-630 NN denotes regard
T28144 619-623 DT denotes this
T28143 616-618 IN denotes In
T28142 614-615 . denotes .
T28141 613-614 NNP denotes ]
T28176 837-840 VBZ denotes has
T28175 827-836 NN denotes arthritis
T28174 816-826 JJ denotes autoimmune
T28173 797-815 JJ denotes Th1-cell-dominated
T28172 794-796 IN denotes in
T28171 784-793 VBG denotes signaling
T28170 778-783 CD denotes STAT3
T28169 767-777 JJ denotes persistent
T28168 764-766 IN denotes of
T28167 751-763 NN denotes significance
T28166 747-750 DT denotes the
T28165 745-746 , denotes ,
T28164 734-745 RB denotes Furthermore
T28163 732-733 . denotes .
T28162 731-732 NNP denotes ]
R14816 T28028 T28029 nummod STAT3,activation
R14817 T28029 T28032 nsubjpass activation,implicated
R14819 T28030 T28032 aux has,implicated
R14820 T28031 T28032 auxpass been,implicated
R14822 T28032 T28032 ROOT implicated,implicated
R14823 T28033 T28032 prep in,implicated
R14824 T28034 T28035 det the,pathogenesis
R14825 T28035 T28033 pobj pathogenesis,in
R14826 T28036 T28035 prep of,pathogenesis
R14827 T28037 T28036 pobj RA,of
R14828 T28038 T28032 punct .,implicated
R14830 T28039 T28040 compound Active,STAT3
R14831 T28040 T28043 nsubjpass STAT3,expressed
R14832 T28041 T28043 auxpass is,expressed
R14834 T28042 T28043 advmod constitutively,expressed
R14835 T28043 T28043 ROOT expressed,expressed
R14839 T28044 T28043 prep in,expressed
R14840 T28045 T28048 amod synovial,cells
R14842 T28046 T28048 amod fluid,cells
R14843 T28047 T28048 compound mononuclear,cells
R14844 T28048 T28044 pobj cells,in
R14846 T28049 T28048 prep from,cells
R14847 T28050 T28051 compound RA,patients
R14849 T28051 T28049 pobj patients,from
R14850 T28052 T28054 nmod [,]
R14851 T28053 T28054 nummod 36,]
R14853 T28054 T28048 appos ],cells
R14854 T28055 T28043 punct .,expressed
R14856 T28056 T28057 nsubj IL-6,is
R14857 T28057 T28057 ROOT is,is
R14858 T28058 T28062 det the,present
R14859 T28059 T28062 amod major,present
R14861 T28060 T28061 amod STAT3-activating,factor
R14862 T28061 T28062 compound factor,present
R14863 T28062 T28057 attr present,is
R14864 T28063 T28062 prep in,present
R14866 T28064 T28065 amod synovial,fluid
R14867 T28065 T28063 pobj fluid,in
R14869 T28066 T28065 punct ",",fluid
R14870 T28067 T28068 nsubj which,has
R14871 T28068 T28062 relcl has,present
R14872 T28069 T28071 det a,role
R14874 T28070 T28071 amod crucial,role
R14875 T28071 T28068 dobj role,has
R14876 T28072 T28071 prep in,role
R14877 T28073 T28074 det the,activation
R14878 T28074 T28072 pobj activation,in
R14879 T28075 T28074 prep of,activation
R14880 T28141 T28139 appos ],[
R14881 T28076 T28077 compound monocyte,functions
R14882 T28142 T28108 punct .,thought
R14883 T28077 T28075 pobj functions,of
R14884 T28078 T28079 amod such,as
R14885 T28079 T28077 prep as,functions
R14886 T28143 T28148 prep In,is
R14887 T28080 T28081 compound gene,expression
R14888 T28081 T28079 pobj expression,as
R14889 T28082 T28081 prep of,expression
R14890 T28144 T28145 det this,regard
R14891 T28083 T28087 det the,type
R14892 T28084 T28087 compound Fc,type
R14893 T28085 T28086 compound gamma,receptor
R14894 T28145 T28143 pobj regard,In
R14895 T28086 T28087 compound receptor,type
R14896 T28087 T28082 pobj type,of
R14897 T28146 T28148 punct ",",is
R14898 T28088 T28081 conj I,expression
R14899 T28089 T28088 cc and,I
R14900 T28090 T28091 compound type,III
R14901 T28147 T28148 nsubj STAT3,is
R14902 T28091 T28088 conj III,I
R14903 T28092 T28088 cc and,I
R14904 T28093 T28081 prep of,expression
R14905 T28148 T28148 ROOT is,is
R14906 T28094 T28095 compound HLA-DR,[
R14907 T28095 T28093 pobj [,of
R14908 T28096 T28097 nummod 31,]
R14909 T28149 T28148 acomp critical,is
R14910 T28097 T28095 appos ],[
R14911 T28098 T28057 punct .,is
R14912 T28099 T28100 advmod More,recently
R14913 T28150 T28149 prep in,critical
R14914 T28100 T28108 advmod recently,thought
R14915 T28101 T28108 punct ",",thought
R14916 T28151 T28152 det the,survival
R14917 T28102 T28103 amod high,levels
R14918 T28103 T28108 nsubj levels,thought
R14919 T28104 T28103 prep of,levels
R14920 T28105 T28106 amod activated,STAT3
R14921 T28152 T28159 nmod survival,fibroblasts
R14922 T28106 T28104 pobj STAT3,of
R14923 T28107 T28108 punct ",",thought
R14924 T28108 T28108 ROOT thought,thought
R14925 T28109 T28111 aux to,induced
R14926 T28110 T28111 auxpass be,induced
R14927 T28111 T28108 xcomp induced,thought
R14928 T28153 T28152 cc and,survival
R14929 T28112 T28111 advmod mainly,induced
R14930 T28113 T28111 agent by,induced
R14931 T28114 T28113 pobj IL-6,by
R14932 T28154 T28152 conj expansion,survival
R14933 T28115 T28108 punct ",",thought
R14934 T28116 T28118 aux have,detected
R14935 T28117 T28118 auxpass been,detected
R14936 T28118 T28108 ccomp detected,thought
R14937 T28119 T28118 prep in,detected
R14938 T28155 T28154 prep of,expansion
R14939 T28120 T28121 det the,ST
R14940 T28121 T28119 pobj ST,in
R14941 T28122 T28118 punct ",",detected
R14942 T28123 T28118 cc and,detected
R14943 T28156 T28155 pobj growth,of
R14944 T28124 T28125 compound STAT3,activation
R14945 T28125 T28128 nsubjpass activation,shown
R14946 T28126 T28128 aux has,shown
R14947 T28157 T28159 nmod factor-dependent,fibroblasts
R14948 T28127 T28128 auxpass been,shown
R14949 T28128 T28118 conj shown,detected
R14950 T28129 T28131 aux to,involved
R14951 T28158 T28159 amod synovial,fibroblasts
R14952 T28130 T28131 auxpass be,involved
R14953 T28131 T28128 xcomp involved,shown
R14954 T28159 T28150 pobj fibroblasts,in
R14955 T28132 T28131 prep in,involved
R14956 T28133 T28135 amod synovial,proliferation
R14957 T28134 T28135 compound fibroblast,proliferation
R14958 T28160 T28162 nmod [,]
R14959 T28135 T28132 pobj proliferation,in
R14960 T28136 T28135 cc and,proliferation
R14961 T28137 T28138 compound IL-6,production
R14962 T28161 T28162 nummod 38,]
R14963 T28138 T28139 compound production,[
R14964 T28139 T28131 dobj [,involved
R14965 T28140 T28141 nummod 37,]
R14966 T28245 T28240 prep through,resistant
R14967 T28246 T28248 amod gp130-mediated,activation
R14968 T28247 T28248 nummod STAT3,activation
R14969 T28162 T28159 appos ],fibroblasts
R14970 T28163 T28148 punct .,is
R14971 T28248 T28245 pobj activation,through
R14972 T28164 T28178 advmod Furthermore,suggested
R14973 T28165 T28178 punct ",",suggested
R14974 T28249 T28238 punct .,activated
R14975 T28166 T28167 det the,significance
R14976 T28167 T28178 nsubjpass significance,suggested
R14977 T28168 T28167 prep of,significance
R14978 T28169 T28171 amod persistent,signaling
R14979 T28170 T28171 nummod STAT3,signaling
R14980 T28171 T28168 pobj signaling,of
R14981 T28172 T28171 prep in,signaling
R14983 T28173 T28175 amod Th1-cell-dominated,arthritis
R14984 T28174 T28175 amod autoimmune,arthritis
R14985 T28175 T28172 pobj arthritis,in
R14986 T28176 T28178 aux has,suggested
R14988 T28177 T28178 auxpass been,suggested
R14989 T28178 T28178 ROOT suggested,suggested
R14991 T28179 T28178 agent by,suggested
R14992 T28180 T28179 pobj studies,by
R14993 T28181 T28180 prep of,studies
R14995 T28182 T28184 det the,mice
R14996 T28183 T28184 compound gp130F759/F759,mice
R14997 T28184 T28181 pobj mice,of
R14999 T28185 T28180 punct ",",studies
R15000 T28186 T28214 prep in,mutated
R15002 T28187 T28186 pobj which,in
R15003 T28188 T28193 det the,site
R15004 T28189 T28193 nmod Src,site
R15006 T28190 T28193 nmod homology,site
R15007 T28191 T28193 amod phosphatase-2,site
R15008 T28192 T28193 amod binding,site
R15010 T28193 T28214 nsubjpass site,mutated
R15011 T28194 T28193 prep of,site
R15012 T28195 T28194 pobj gp130,of
R15014 T28196 T28195 punct (,gp130
R15015 T28197 T28201 det the,subunit
R15016 T28198 T28201 nmod transmembrane,subunit
R15018 T28199 T28201 nmod glycoprotein,subunit
R15021 T28200 T28201 compound β,subunit
R15022 T28201 T28195 appos subunit,gp130
R15023 T28202 T28201 prep of,subunit
R15025 T28203 T28207 det the,receptor
R15026 T28204 T28205 compound IL-6,family
R15027 T28205 T28207 nmod family,receptor
R15028 T28206 T28207 compound cytokine,receptor
R15029 T28207 T28202 pobj receptor,of
R15031 T28208 T28195 punct ),gp130
R15032 T28209 T28193 punct ",",site
R15033 T28210 T28211 amod tyrosine,759
R15035 T28211 T28193 appos 759,site
R15036 T28212 T28214 punct ",",mutated
R15037 T28213 T28214 auxpass was,mutated
R15038 T28214 T28180 relcl mutated,studies
R15040 T28215 T28216 aux to,phenylalanine
R15041 T28216 T28214 advcl phenylalanine,mutated
R15043 T28217 T28216 dobj [,phenylalanine
R15044 T28218 T28219 nummod 39,]
R15045 T28219 T28217 appos ],[
R15047 T28220 T28178 punct .,suggested
R15048 T28221 T28238 prep In,activated
R15049 T28222 T28224 det the,mice
R15051 T28223 T28224 compound gp130F759/F759,mice
R15052 T28224 T28221 pobj mice,In
R15053 T28225 T28238 punct ",",activated
R15055 T28226 T28227 compound T,cells
R15056 T28227 T28238 nsubjpass cells,activated
R15057 T28228 T28227 punct ",",cells
R15059 T28229 T28234 advmod particularly,subset
R15060 T28230 T28234 det the,subset
R15061 T28231 T28234 compound CD4,subset
R15063 T28232 T28234 compound +,subset
R15065 T28233 T28234 compound T-cell,subset
R15066 T28234 T28227 appos subset,cells
R15068 T28235 T28238 punct ",",activated
R15069 T28236 T28238 auxpass are,activated
R15071 T28237 T28238 advmod chronically,activated
R15072 T28238 T28238 ROOT activated,activated
R15073 T28239 T28238 cc and,activated
R15075 T28240 T28238 conj resistant,activated
R15076 T28241 T28244 nmod to,death
R15077 T28242 T28244 amod activation-induced,death
R15078 T28243 T28244 compound cell,death
R15079 T28244 T28240 dobj death,resistant

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T24119 1248-1256 Positive_regulation denotes mediated
T24118 1263-1273 Positive_regulation denotes activation
T24117 1257-1262 Protein denotes STAT3
T24116 1242-1247 Protein denotes gp130
T24115 1141-1145 Protein denotes CD4+
T24114 1056-1063 Positive_regulation denotes mutated
T24113 1056-1063 Positive_regulation denotes mutated
T24112 1006-1035 Protein denotes IL-6 family cytokine receptor
T24111 951-956 Protein denotes gp130
T24110 908-947 Protein denotes Src homology phosphatase-2 binding site
T24109 778-783 Protein denotes STAT3
T24108 632-637 Protein denotes STAT3
T24107 512-522 Positive_regulation denotes activation
T24106 417-426 Positive_regulation denotes activated
T24105 506-511 Protein denotes STAT3
T24104 466-470 Protein denotes IL-6
T24103 427-432 Protein denotes STAT3
T24102 311-321 Gene_expression denotes expression
T24101 329-353 Protein denotes Fc gamma receptor type I
T24100 182-187 Protein denotes STAT3
T24099 164-168 Protein denotes IL-6
T24098 95-104 Gene_expression denotes expressed
T24097 71-76 Protein denotes STAT3
T24096 6-16 Positive_regulation denotes activation
T24095 0-5 Protein denotes STAT3
R11483 T24095 T24096 themeOf STAT3,activation
R11484 T24097 T24098 themeOf STAT3,expressed
R11485 T24101 T24102 themeOf Fc gamma receptor type I,expression
R11486 T24103 T24106 themeOf STAT3,activated
R11487 T24105 T24107 themeOf STAT3,activation
R11488 T24110 T24113 themeOf Src homology phosphatase-2 binding site,mutated
R11489 T24111 T24114 themeOf gp130,mutated
R11490 T24116 T24119 causeOf gp130,mediated
R11491 T24117 T24118 themeOf STAT3,activation
R11492 T24118 T24119 themeOf activation,mediated

test3

Id Subject Object Predicate Lexical cue
T22694 1263-1273 Positive_regulation denotes activation
T22693 1257-1262 Protein denotes STAT3
T22692 1248-1256 Positive_regulation denotes mediated
T22691 1242-1247 Protein denotes gp130
T22690 1141-1144 Protein denotes CD4
T22689 1094-1103 Protein denotes gp130F759
T22688 962-1035 Protein denotes transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor
T22687 951-956 Protein denotes gp130
T22686 935-942 Binding denotes binding
T22685 932-933 Entity denotes -
T22684 874-883 Protein denotes gp130F759
T22683 778-783 Protein denotes STAT3
T22682 632-637 Protein denotes STAT3
T22681 599-609 Gene_expression denotes production
T22680 594-598 Protein denotes IL-6
T22679 512-522 Positive_regulation denotes activation
T22678 506-511 Protein denotes STAT3
T22677 466-470 Protein denotes IL-6
T22676 448-455 Positive_regulation denotes induced
T22675 427-432 Protein denotes STAT3
T22674 417-426 Positive_regulation denotes activated
T22673 358-366 Protein denotes type III
T22672 329-353 Protein denotes Fc gamma receptor type I
T22671 311-321 Gene_expression denotes expression
T22670 182-187 Protein denotes STAT3
T22669 164-168 Protein denotes IL-6
T22668 95-104 Gene_expression denotes expressed
T22667 71-76 Protein denotes STAT3
T22666 64-70 Positive_regulation denotes Active
T22665 6-16 Positive_regulation denotes activation
T22664 0-5 Protein denotes STAT3
T22395 1257-1262 Protein denotes STAT3
T22394 1242-1247 Protein denotes gp130
T22393 1141-1144 Protein denotes CD4
T22392 1094-1099 Protein denotes gp130
T22391 962-1035 Protein denotes transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor
T22390 951-956 Protein denotes gp130
T22389 874-879 Protein denotes gp130
T22388 778-783 Protein denotes STAT3
T22387 632-637 Protein denotes STAT3
T22386 594-598 Protein denotes IL-6
T22385 506-511 Protein denotes STAT3
T22384 466-470 Protein denotes IL-6
T22383 427-432 Protein denotes STAT3
T22382 358-366 Protein denotes type III
T22381 329-353 Protein denotes Fc gamma receptor type I
T22380 182-187 Protein denotes STAT3
T22379 164-168 Protein denotes IL-6
T22378 71-76 Protein denotes STAT3
T22377 0-5 Protein denotes STAT3
R11084 T22664 T22665 themeOf STAT3,activation
R11085 T22667 T22668 themeOf STAT3,expressed
R11086 T22667 T22666 themeOf STAT3,Active
R11087 T22672 T22671 themeOf Fc gamma receptor type I,expression
R11088 T22673 T22671 themeOf type III,expression
R11089 T22675 T22676 themeOf STAT3,induced
R11090 T22675 T22674 themeOf STAT3,activated
R11091 T22677 T22676 causeOf IL-6,induced
R11092 T22678 T22679 themeOf STAT3,activation
R11093 T22680 T22681 themeOf IL-6,production
R11094 T22691 T22692 causeOf gp130,mediated
R11095 T22693 T22694 themeOf STAT3,activation
R11096 T22694 T22692 themeOf activation,mediated

testone

Id Subject Object Predicate Lexical cue
T22011 1263-1273 Positive_regulation denotes activation
T22010 1248-1256 Positive_regulation denotes mediated
T22009 943-947 Entity denotes site
T22008 935-942 Binding denotes binding
T22007 912-934 Entity denotes homology phosphatase-2
T22006 599-609 Gene_expression denotes production
T22005 512-522 Positive_regulation denotes activation
T22004 448-455 Positive_regulation denotes induced
T22003 417-426 Positive_regulation denotes activated
T22002 95-104 Gene_expression denotes expressed
T22001 64-70 Positive_regulation denotes Active
T22000 6-16 Positive_regulation denotes activation
T21862 1257-1262 Protein denotes STAT3
T21861 1242-1247 Protein denotes gp130
T21860 1141-1144 Protein denotes CD4
T21859 1094-1099 Protein denotes gp130
T21858 962-1035 Protein denotes transmembrane glycoprotein β subunit of the IL-6 family cytokine receptor
T21857 951-956 Protein denotes gp130
T21856 874-879 Protein denotes gp130
T21855 778-783 Protein denotes STAT3
T21854 632-637 Protein denotes STAT3
T21853 594-598 Protein denotes IL-6
T21852 506-511 Protein denotes STAT3
T21851 466-470 Protein denotes IL-6
T21850 427-432 Protein denotes STAT3
T21849 358-366 Protein denotes type III
T21848 329-353 Protein denotes Fc gamma receptor type I
T21847 182-187 Protein denotes STAT3
T21846 164-168 Protein denotes IL-6
T21845 71-76 Protein denotes STAT3
T21844 0-5 Protein denotes STAT3
R10906 T21844 T22000 themeOf STAT3,activation
R10907 T21845 T22002 themeOf STAT3,expressed
R10908 T21850 T22003 themeOf STAT3,activated
R10909 T21851 T22004 causeOf IL-6,induced
R10910 T21852 T22005 themeOf STAT3,activation
R10911 T21853 T22006 themeOf IL-6,production
R10912 T21861 T22010 causeOf gp130,mediated
R10913 T21862 T22011 themeOf STAT3,activation
R10974 T22003 T22004 themeOf activated,induced
R10975 T22005 T22004 causeOf activation,induced
R10976 T22007 T22008 themeOf homology phosphatase-2,binding
R10977 T22011 T22010 themeOf activation,mediated