
PMC:1064873 / 2918-3212
Annnotations
LappsTest
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2202 | 100-110 | Protein | denotes | JAK kinase |
T2201 | 38-42 | Protein | denotes | SOCS |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
15535835-11527983-4156868 | 291-292 | 11527983 | denotes | 7 |
biosemtest
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3109 | 251-269 | UMLS/C0037080 | denotes | signaling pathways |
T3100 | 4-36 | UP/Q62225 | denotes | suppressor of cytokine signaling |
T3094 | 100-110 | UMLS/C0597721 | denotes | JAK kinase |
T2998 | 251-269 | UMLS/C0086982 | denotes | signaling pathways |
T2990 | 138-145 | UMLS/C0439858 | denotes | classic |
T2956 | 4-36 | UMLS/C0299250 | denotes | suppressor of cytokine signaling |
T2948 | 4-36 | UP/Q9PW70 | denotes | suppressor of cytokine signaling |
T2933 | 79-85 | UMLS/C1563343 | denotes | family |
T2926 | 63-73 | UMLS/C1551388 | denotes | identified |
T2921 | 79-85 | UMLS/C1704727 | denotes | family |
T2834 | 219-229 | UMLS/C1628982 | denotes | inhibition |
T2803 | 138-145 | UMLS/C0439658 | denotes | classic |
T2795 | 127-130 | UMLS/C0006823 | denotes | can |
T2783 | 4-36 | UP/O70512 | denotes | suppressor of cytokine signaling |
T2759 | 63-73 | UMLS/C0205396 | denotes | identified |
T2753 | 219-229 | UMLS/C0021467 | denotes | inhibition |
T2748 | 219-229 | UMLS/C0021469 | denotes | inhibition |
T2738 | 146-165 | UMLS/C0678613 | denotes | feedback inhibition |
T2725 | 183-188 | UMLS/C1705809 | denotes | roles |
T2724 | 242-260 | UMLS/C1511617 | denotes | cytokine signaling |
T2719 | 183-188 | UMLS/C1705812 | denotes | roles |
T2715 | 183-188 | UMLS/C1705810 | denotes | roles |
T2712 | 183-188 | UMLS/C1705811 | denotes | roles |
T2678 | 183-188 | UMLS/C0035820 | denotes | roles |
T3219 | 196-205 | UMLS/C1363844 | denotes | mediators |
T3213 | 131-134 | UMLS/C1551336 | denotes | act |
T3205 | 79-85 | UMLS/C1555907 | denotes | family |
T3173 | 79-85 | UMLS/C1552262 | denotes | family |
T3156 | 127-130 | UMLS/C0344312 | denotes | can |
T3155 | 79-85 | UMLS/C2700055 | denotes | family |
T3150 | 183-188 | UMLS/C1704326 | denotes | roles |
T3131 | 38-52 | UMLS/C1564682 | denotes | SOCS) proteins |
T2634 | 79-85 | UMLS/C0015576 | denotes | family |
T2885 | 166-171 | UMLS/C0445022 | denotes | loops |
T2840 | 89-99 | UMLS/C0205227 | denotes | endogenous |
T2621 | 63-73 | UMLS/C1550043 | denotes | identified |
T2620 | 104-121 | UMLS/C1152564 | denotes | kinase inhibitors |
T2574 | 166-171 | UMLS/C1881441 | denotes | loops |
T2559 | 104-121 | UMLS/C1171350 | denotes | kinase inhibitors |
T2477 | 173-176 | UMLS/C0005341 | denotes | but |
T2451 | 4-36 | UP/Q9NSE2 | denotes | suppressor of cytokine signaling |
T2437 | 196-205 | UMLS/C0127400 | denotes | mediators |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4182 | 292-293 | -RRB- | denotes | ] |
T4181 | 291-292 | CD | denotes | 7 |
T4180 | 290-291 | -LRB- | denotes | [ |
T4179 | 280-289 | VB | denotes | clarified |
T4178 | 275-279 | VB | denotes | been |
T4177 | 270-274 | VB | denotes | have |
T4176 | 261-269 | NN | denotes | pathways |
T4175 | 251-260 | NN | denotes | signaling |
T4174 | 242-250 | NN | denotes | cytokine |
T4173 | 233-241 | VB | denotes | opposing |
T4172 | 230-232 | IN | denotes | by |
T4171 | 219-229 | NN | denotes | inhibition |
T4170 | 209-218 | NN | denotes | crosstalk |
T4169 | 206-208 | IN | denotes | of |
T4168 | 196-205 | NN | denotes | mediators |
T4167 | 192-195 | DT | denotes | the |
T4166 | 189-191 | IN | denotes | as |
T4165 | 183-188 | NN | denotes | roles |
T4164 | 177-182 | PRP-DOLLAR- | denotes | their |
T4163 | 173-176 | CC | denotes | but |
T4162 | 171-172 | -COMMA- | denotes | , |
T4161 | 166-171 | VB | denotes | loops |
T4160 | 155-165 | NN | denotes | inhibition |
T4159 | 146-154 | NN | denotes | feedback |
T4158 | 138-145 | JJ | denotes | classic |
T4157 | 135-137 | IN | denotes | in |
T4156 | 131-134 | VB | denotes | act |
T4155 | 127-130 | MD | denotes | can |
T4154 | 122-126 | WDT | denotes | that |
T4153 | 111-121 | NN | denotes | inhibitors |
T4152 | 104-110 | NN | denotes | kinase |
T4151 | 100-103 | NN | denotes | JAK |
T4150 | 89-99 | JJ | denotes | endogenous |
T4149 | 86-88 | IN | denotes | of |
T4148 | 79-85 | NN | denotes | family |
T4147 | 77-78 | DT | denotes | a |
T4146 | 74-76 | IN | denotes | as |
T4145 | 63-73 | VB | denotes | identified |
T4144 | 58-62 | VB | denotes | been |
T4143 | 53-57 | VB | denotes | have |
T4142 | 44-52 | NN | denotes | proteins |
T4141 | 42-43 | -RRB- | denotes | ) |
T4140 | 38-42 | NN | denotes | SOCS |
T4139 | 37-38 | -LRB- | denotes | ( |
T4138 | 27-36 | NN | denotes | signaling |
T4137 | 18-26 | NN | denotes | cytokine |
T4136 | 15-17 | IN | denotes | of |
T4135 | 4-14 | NN | denotes | suppressor |
T4134 | 0-3 | DT | denotes | The |
R1180 | T4148 | T4146 | arg2Of | family,as |
R1181 | T4148 | T4147 | arg1Of | family,a |
R1182 | T4148 | T4149 | arg1Of | family,of |
R1186 | T4153 | T4149 | arg2Of | inhibitors,of |
R1187 | T4153 | T4150 | arg1Of | inhibitors,endogenous |
R1188 | T4153 | T4151 | arg1Of | inhibitors,JAK |
R1189 | T4153 | T4152 | arg1Of | inhibitors,kinase |
R1190 | T4153 | T4154 | arg1Of | inhibitors,that |
R1191 | T4153 | T4155 | arg1Of | inhibitors,can |
R1192 | T4153 | T4156 | arg1Of | inhibitors,act |
R1194 | T4156 | T4155 | arg2Of | act,can |
R1195 | T4156 | T4157 | arg1Of | act,in |
R1198 | T4161 | T4157 | arg2Of | loops,in |
R1199 | T4161 | T4158 | arg1Of | loops,classic |
R1200 | T4161 | T4159 | arg1Of | loops,feedback |
R1201 | T4161 | T4160 | arg1Of | loops,inhibition |
R1202 | T4163 | T4162 | arg1Of | but,"," |
R1204 | T4165 | T4164 | arg1Of | roles,their |
R1205 | T4165 | T4166 | arg1Of | roles,as |
R1206 | T4165 | T4177 | arg1Of | roles,have |
R1207 | T4165 | T4178 | arg1Of | roles,been |
R1208 | T4165 | T4179 | arg2Of | roles,clarified |
R1210 | T4168 | T4166 | arg2Of | mediators,as |
R1211 | T4168 | T4167 | arg1Of | mediators,the |
R1212 | T4168 | T4169 | arg1Of | mediators,of |
R1213 | T4168 | T4172 | arg1Of | mediators,by |
R1215 | T4171 | T4169 | arg2Of | inhibition,of |
R1216 | T4171 | T4170 | arg1Of | inhibition,crosstalk |
R1218 | T4173 | T4172 | arg2Of | opposing,by |
R1219 | T4176 | T4173 | arg2Of | pathways,opposing |
R1220 | T4176 | T4174 | arg1Of | pathways,cytokine |
R1221 | T4176 | T4175 | arg1Of | pathways,signaling |
R1223 | T4179 | T4163 | arg2Of | clarified,but |
R1224 | T4179 | T4177 | arg2Of | clarified,have |
R1225 | T4179 | T4178 | arg2Of | clarified,been |
R1226 | T4179 | T4180 | arg1Of | clarified,[ |
R1227 | T4181 | T4180 | arg2Of | 7,[ |
R1229 | T4182 | T4180 | arg3Of | ],[ |
R1359 | T4135 | T4134 | arg1Of | suppressor,The |
R1362 | T4135 | T4136 | arg1Of | suppressor,of |
R1374 | T4135 | T4143 | arg1Of | suppressor,have |
R1375 | T4135 | T4144 | arg1Of | suppressor,been |
R1376 | T4135 | T4145 | arg2Of | suppressor,identified |
R1377 | T4140 | T4139 | arg2Of | SOCS,( |
R1391 | T4141 | T4139 | arg3Of | ),( |
R1395 | T4142 | T4136 | arg2Of | proteins,of |
R1398 | T4142 | T4137 | arg1Of | proteins,cytokine |
R1400 | T4142 | T4138 | arg1Of | proteins,signaling |
R1403 | T4142 | T4139 | arg1Of | proteins,( |
R1404 | T4145 | T4143 | arg2Of | identified,have |
R1413 | T4145 | T4144 | arg2Of | identified,been |
R1415 | T4145 | T4146 | arg1Of | identified,as |
R1417 | T4145 | T4163 | arg1Of | identified,but |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3289 | 251-269 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signaling pathways |
T3288 | 242-269 | http://purl.obolibrary.org/obo/GO_0019221 | denotes | cytokine signaling pathways |
T3287 | 104-121 | http://purl.obolibrary.org/obo/GO_0033673 | denotes | kinase inhibitors |
T3270 | 100-103 | http://purl.obolibrary.org/obo/GO_0004713 | denotes | JAK |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3570 | 100-103 | http://purl.obolibrary.org/obo/GO_0004713 | denotes | JAK |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3241 | 0-294 | Sentence | denotes | The suppressor of cytokine signaling (SOCS) proteins have been identified as a family of endogenous JAK kinase inhibitors that can act in classic feedback inhibition loops, but their roles as the mediators of crosstalk inhibition by opposing cytokine signaling pathways have been clarified [7]. |
T18 | 0-294 | Sentence | denotes | The suppressor of cytokine signaling (SOCS) proteins have been identified as a family of endogenous JAK kinase inhibitors that can act in classic feedback inhibition loops, but their roles as the mediators of crosstalk inhibition by opposing cytokine signaling pathways have been clarified [7]. |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T6232 | 38-42 | Protein | denotes | SOCS |
T6231 | 242-269 | Protein | denotes | cytokine signaling pathways |
T6224 | 89-121 | Protein | denotes | endogenous JAK kinase inhibitors |
T6211 | 100-103 | Protein | denotes | JAK |
T6275 | 0-43 | Protein | denotes | The suppressor of cytokine signaling (SOCS) |
T6326 | 44-52 | Protein | denotes | proteins |
T6321 | 89-121 | Entity | denotes | endogenous JAK kinase inhibitors |
T6310 | 89-121 | Protein | denotes | endogenous JAK kinase inhibitors |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5165 | 293-294 | . | denotes | . |
T5164 | 292-293 | NNP | denotes | ] |
T5163 | 291-292 | CD | denotes | 7 |
T5162 | 290-291 | NNP | denotes | [ |
T5161 | 280-289 | VBN | denotes | clarified |
T5160 | 275-279 | VBN | denotes | been |
T5159 | 270-274 | VBP | denotes | have |
T5158 | 261-269 | NNS | denotes | pathways |
T5157 | 251-260 | VBG | denotes | signaling |
T5156 | 242-250 | NN | denotes | cytokine |
T5155 | 233-241 | VBG | denotes | opposing |
T5154 | 230-232 | IN | denotes | by |
T5153 | 219-229 | NN | denotes | inhibition |
T5152 | 209-218 | NN | denotes | crosstalk |
T5151 | 206-208 | IN | denotes | of |
T5150 | 196-205 | NNS | denotes | mediators |
T5149 | 192-195 | DT | denotes | the |
T5148 | 189-191 | IN | denotes | as |
T5147 | 183-188 | NNS | denotes | roles |
T5146 | 177-182 | PRP$ | denotes | their |
T5145 | 173-176 | CC | denotes | but |
T5144 | 171-172 | , | denotes | , |
T5143 | 166-171 | NNS | denotes | loops |
T5142 | 155-165 | NN | denotes | inhibition |
T5141 | 146-154 | NN | denotes | feedback |
T5140 | 138-145 | JJ | denotes | classic |
T5139 | 135-137 | IN | denotes | in |
T5138 | 131-134 | VB | denotes | act |
T5137 | 127-130 | MD | denotes | can |
T5136 | 122-126 | WDT | denotes | that |
T5135 | 111-121 | NNS | denotes | inhibitors |
T5134 | 104-110 | NN | denotes | kinase |
T5133 | 100-103 | NNP | denotes | JAK |
T5132 | 89-99 | JJ | denotes | endogenous |
T5131 | 86-88 | IN | denotes | of |
T5130 | 79-85 | NN | denotes | family |
T5129 | 77-78 | DT | denotes | a |
T5128 | 74-76 | IN | denotes | as |
T5127 | 63-73 | VBN | denotes | identified |
T5126 | 58-62 | VBN | denotes | been |
T5125 | 53-57 | VBP | denotes | have |
T5124 | 44-52 | NNS | denotes | proteins |
T5123 | 42-43 | -RRB- | denotes | ) |
T5122 | 38-42 | NNP | denotes | SOCS |
T5121 | 37-38 | -LRB- | denotes | ( |
T5120 | 27-36 | VBG | denotes | signaling |
T5119 | 18-26 | NN | denotes | cytokine |
T5118 | 15-17 | IN | denotes | of |
T5117 | 4-14 | NN | denotes | suppressor |
T5116 | 0-3 | DT | denotes | The |
R2161 | T5165 | T5127 | punct | .,identified |
R2185 | T5116 | T5117 | det | The,suppressor |
R2187 | T5117 | T5117 | ROOT | suppressor,suppressor |
R2188 | T5118 | T5117 | prep | of,suppressor |
R2189 | T5119 | T5118 | pobj | cytokine,of |
R2191 | T5120 | T5117 | acl | signaling,suppressor |
R2192 | T5121 | T5120 | punct | (,signaling |
R2193 | T5122 | T5120 | appos | SOCS,signaling |
R2195 | T5123 | T5120 | punct | ),signaling |
R2196 | T5124 | T5127 | nsubjpass | proteins,identified |
R2197 | T5125 | T5127 | aux | have,identified |
R2199 | T5126 | T5127 | auxpass | been,identified |
R2200 | T5127 | T5127 | ROOT | identified,identified |
R2201 | T5128 | T5127 | prep | as,identified |
R2203 | T5129 | T5130 | det | a,family |
R2204 | T5130 | T5128 | pobj | family,as |
R2206 | T5131 | T5130 | prep | of,family |
R2207 | T5132 | T5135 | amod | endogenous,inhibitors |
R2208 | T5133 | T5135 | nmod | JAK,inhibitors |
R2209 | T5134 | T5135 | compound | kinase,inhibitors |
R2211 | T5135 | T5131 | pobj | inhibitors,of |
R2212 | T5136 | T5138 | nsubj | that,act |
R2213 | T5137 | T5138 | aux | can,act |
R2215 | T5138 | T5135 | relcl | act,inhibitors |
R2216 | T5139 | T5138 | prep | in,act |
R2217 | T5140 | T5143 | amod | classic,loops |
R2219 | T5141 | T5142 | compound | feedback,inhibition |
R2220 | T5142 | T5143 | compound | inhibition,loops |
R2221 | T5143 | T5139 | pobj | loops,in |
R2223 | T5144 | T5127 | punct | ",",identified |
R2224 | T5145 | T5127 | cc | but,identified |
R2225 | T5146 | T5147 | poss | their,roles |
R2227 | T5147 | T5127 | conj | roles,identified |
R2228 | T5148 | T5147 | prep | as,roles |
R2229 | T5149 | T5150 | det | the,mediators |
R2230 | T5150 | T5148 | pobj | mediators,as |
R2232 | T5151 | T5150 | prep | of,mediators |
R2233 | T5152 | T5153 | compound | crosstalk,inhibition |
R2234 | T5153 | T5151 | pobj | inhibition,of |
R2236 | T5154 | T5127 | agent | by,identified |
R2237 | T5155 | T5154 | pcomp | opposing,by |
R2238 | T5156 | T5155 | dobj | cytokine,opposing |
R2240 | T5157 | T5155 | conj | signaling,opposing |
R2241 | T5158 | T5161 | nsubjpass | pathways,clarified |
R2243 | T5159 | T5161 | aux | have,clarified |
R2244 | T5160 | T5161 | auxpass | been,clarified |
R2245 | T5161 | T5157 | ccomp | clarified,signaling |
R2247 | T5162 | T5164 | nmod | [,] |
R2248 | T5163 | T5164 | nummod | 7,] |
R2249 | T5164 | T5161 | dobj | ],clarified |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3745 | 111-121 | Negative_regulation | denotes | inhibitors |
T3744 | 100-110 | Protein | denotes | JAK kinase |
T3743 | 18-52 | Protein | denotes | cytokine signaling (SOCS) proteins |
R977 | T3744 | T3745 | themeOf | JAK kinase,inhibitors |