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PMC:1064873 / 2918-3212 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T2202 100-110 Protein denotes JAK kinase
T2201 38-42 Protein denotes SOCS

2_test

Id Subject Object Predicate Lexical cue
15535835-11527983-4156868 291-292 11527983 denotes 7

biosemtest

Id Subject Object Predicate Lexical cue
T3109 251-269 UMLS/C0037080 denotes signaling pathways
T3100 4-36 UP/Q62225 denotes suppressor of cytokine signaling
T3094 100-110 UMLS/C0597721 denotes JAK kinase
T2998 251-269 UMLS/C0086982 denotes signaling pathways
T2990 138-145 UMLS/C0439858 denotes classic
T2956 4-36 UMLS/C0299250 denotes suppressor of cytokine signaling
T2948 4-36 UP/Q9PW70 denotes suppressor of cytokine signaling
T2933 79-85 UMLS/C1563343 denotes family
T2926 63-73 UMLS/C1551388 denotes identified
T2921 79-85 UMLS/C1704727 denotes family
T2834 219-229 UMLS/C1628982 denotes inhibition
T2803 138-145 UMLS/C0439658 denotes classic
T2795 127-130 UMLS/C0006823 denotes can
T2783 4-36 UP/O70512 denotes suppressor of cytokine signaling
T2759 63-73 UMLS/C0205396 denotes identified
T2753 219-229 UMLS/C0021467 denotes inhibition
T2748 219-229 UMLS/C0021469 denotes inhibition
T2738 146-165 UMLS/C0678613 denotes feedback inhibition
T2725 183-188 UMLS/C1705809 denotes roles
T2724 242-260 UMLS/C1511617 denotes cytokine signaling
T2719 183-188 UMLS/C1705812 denotes roles
T2715 183-188 UMLS/C1705810 denotes roles
T2712 183-188 UMLS/C1705811 denotes roles
T2678 183-188 UMLS/C0035820 denotes roles
T3219 196-205 UMLS/C1363844 denotes mediators
T3213 131-134 UMLS/C1551336 denotes act
T3205 79-85 UMLS/C1555907 denotes family
T3173 79-85 UMLS/C1552262 denotes family
T3156 127-130 UMLS/C0344312 denotes can
T3155 79-85 UMLS/C2700055 denotes family
T3150 183-188 UMLS/C1704326 denotes roles
T3131 38-52 UMLS/C1564682 denotes SOCS) proteins
T2634 79-85 UMLS/C0015576 denotes family
T2885 166-171 UMLS/C0445022 denotes loops
T2840 89-99 UMLS/C0205227 denotes endogenous
T2621 63-73 UMLS/C1550043 denotes identified
T2620 104-121 UMLS/C1152564 denotes kinase inhibitors
T2574 166-171 UMLS/C1881441 denotes loops
T2559 104-121 UMLS/C1171350 denotes kinase inhibitors
T2477 173-176 UMLS/C0005341 denotes but
T2451 4-36 UP/Q9NSE2 denotes suppressor of cytokine signaling
T2437 196-205 UMLS/C0127400 denotes mediators

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4182 292-293 -RRB- denotes ]
T4181 291-292 CD denotes 7
T4180 290-291 -LRB- denotes [
T4179 280-289 VB denotes clarified
T4178 275-279 VB denotes been
T4177 270-274 VB denotes have
T4176 261-269 NN denotes pathways
T4175 251-260 NN denotes signaling
T4174 242-250 NN denotes cytokine
T4173 233-241 VB denotes opposing
T4172 230-232 IN denotes by
T4171 219-229 NN denotes inhibition
T4170 209-218 NN denotes crosstalk
T4169 206-208 IN denotes of
T4168 196-205 NN denotes mediators
T4167 192-195 DT denotes the
T4166 189-191 IN denotes as
T4165 183-188 NN denotes roles
T4164 177-182 PRP-DOLLAR- denotes their
T4163 173-176 CC denotes but
T4162 171-172 -COMMA- denotes ,
T4161 166-171 VB denotes loops
T4160 155-165 NN denotes inhibition
T4159 146-154 NN denotes feedback
T4158 138-145 JJ denotes classic
T4157 135-137 IN denotes in
T4156 131-134 VB denotes act
T4155 127-130 MD denotes can
T4154 122-126 WDT denotes that
T4153 111-121 NN denotes inhibitors
T4152 104-110 NN denotes kinase
T4151 100-103 NN denotes JAK
T4150 89-99 JJ denotes endogenous
T4149 86-88 IN denotes of
T4148 79-85 NN denotes family
T4147 77-78 DT denotes a
T4146 74-76 IN denotes as
T4145 63-73 VB denotes identified
T4144 58-62 VB denotes been
T4143 53-57 VB denotes have
T4142 44-52 NN denotes proteins
T4141 42-43 -RRB- denotes )
T4140 38-42 NN denotes SOCS
T4139 37-38 -LRB- denotes (
T4138 27-36 NN denotes signaling
T4137 18-26 NN denotes cytokine
T4136 15-17 IN denotes of
T4135 4-14 NN denotes suppressor
T4134 0-3 DT denotes The
R1180 T4148 T4146 arg2Of family,as
R1181 T4148 T4147 arg1Of family,a
R1182 T4148 T4149 arg1Of family,of
R1186 T4153 T4149 arg2Of inhibitors,of
R1187 T4153 T4150 arg1Of inhibitors,endogenous
R1188 T4153 T4151 arg1Of inhibitors,JAK
R1189 T4153 T4152 arg1Of inhibitors,kinase
R1190 T4153 T4154 arg1Of inhibitors,that
R1191 T4153 T4155 arg1Of inhibitors,can
R1192 T4153 T4156 arg1Of inhibitors,act
R1194 T4156 T4155 arg2Of act,can
R1195 T4156 T4157 arg1Of act,in
R1198 T4161 T4157 arg2Of loops,in
R1199 T4161 T4158 arg1Of loops,classic
R1200 T4161 T4159 arg1Of loops,feedback
R1201 T4161 T4160 arg1Of loops,inhibition
R1202 T4163 T4162 arg1Of but,","
R1204 T4165 T4164 arg1Of roles,their
R1205 T4165 T4166 arg1Of roles,as
R1206 T4165 T4177 arg1Of roles,have
R1207 T4165 T4178 arg1Of roles,been
R1208 T4165 T4179 arg2Of roles,clarified
R1210 T4168 T4166 arg2Of mediators,as
R1211 T4168 T4167 arg1Of mediators,the
R1212 T4168 T4169 arg1Of mediators,of
R1213 T4168 T4172 arg1Of mediators,by
R1215 T4171 T4169 arg2Of inhibition,of
R1216 T4171 T4170 arg1Of inhibition,crosstalk
R1218 T4173 T4172 arg2Of opposing,by
R1219 T4176 T4173 arg2Of pathways,opposing
R1220 T4176 T4174 arg1Of pathways,cytokine
R1221 T4176 T4175 arg1Of pathways,signaling
R1223 T4179 T4163 arg2Of clarified,but
R1224 T4179 T4177 arg2Of clarified,have
R1225 T4179 T4178 arg2Of clarified,been
R1226 T4179 T4180 arg1Of clarified,[
R1227 T4181 T4180 arg2Of 7,[
R1229 T4182 T4180 arg3Of ],[
R1359 T4135 T4134 arg1Of suppressor,The
R1362 T4135 T4136 arg1Of suppressor,of
R1374 T4135 T4143 arg1Of suppressor,have
R1375 T4135 T4144 arg1Of suppressor,been
R1376 T4135 T4145 arg2Of suppressor,identified
R1377 T4140 T4139 arg2Of SOCS,(
R1391 T4141 T4139 arg3Of ),(
R1395 T4142 T4136 arg2Of proteins,of
R1398 T4142 T4137 arg1Of proteins,cytokine
R1400 T4142 T4138 arg1Of proteins,signaling
R1403 T4142 T4139 arg1Of proteins,(
R1404 T4145 T4143 arg2Of identified,have
R1413 T4145 T4144 arg2Of identified,been
R1415 T4145 T4146 arg1Of identified,as
R1417 T4145 T4163 arg1Of identified,but

GO-BP

Id Subject Object Predicate Lexical cue
T3289 251-269 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathways
T3288 242-269 http://purl.obolibrary.org/obo/GO_0019221 denotes cytokine signaling pathways
T3287 104-121 http://purl.obolibrary.org/obo/GO_0033673 denotes kinase inhibitors
T3270 100-103 http://purl.obolibrary.org/obo/GO_0004713 denotes JAK

GO-MF

Id Subject Object Predicate Lexical cue
T3570 100-103 http://purl.obolibrary.org/obo/GO_0004713 denotes JAK

sentences

Id Subject Object Predicate Lexical cue
T3241 0-294 Sentence denotes The suppressor of cytokine signaling (SOCS) proteins have been identified as a family of endogenous JAK kinase inhibitors that can act in classic feedback inhibition loops, but their roles as the mediators of crosstalk inhibition by opposing cytokine signaling pathways have been clarified [7].
T18 0-294 Sentence denotes The suppressor of cytokine signaling (SOCS) proteins have been identified as a family of endogenous JAK kinase inhibitors that can act in classic feedback inhibition loops, but their roles as the mediators of crosstalk inhibition by opposing cytokine signaling pathways have been clarified [7].

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T6232 38-42 Protein denotes SOCS
T6231 242-269 Protein denotes cytokine signaling pathways
T6224 89-121 Protein denotes endogenous JAK kinase inhibitors
T6211 100-103 Protein denotes JAK
T6275 0-43 Protein denotes The suppressor of cytokine signaling (SOCS)
T6326 44-52 Protein denotes proteins
T6321 89-121 Entity denotes endogenous JAK kinase inhibitors
T6310 89-121 Protein denotes endogenous JAK kinase inhibitors

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5165 293-294 . denotes .
T5164 292-293 NNP denotes ]
T5163 291-292 CD denotes 7
T5162 290-291 NNP denotes [
T5161 280-289 VBN denotes clarified
T5160 275-279 VBN denotes been
T5159 270-274 VBP denotes have
T5158 261-269 NNS denotes pathways
T5157 251-260 VBG denotes signaling
T5156 242-250 NN denotes cytokine
T5155 233-241 VBG denotes opposing
T5154 230-232 IN denotes by
T5153 219-229 NN denotes inhibition
T5152 209-218 NN denotes crosstalk
T5151 206-208 IN denotes of
T5150 196-205 NNS denotes mediators
T5149 192-195 DT denotes the
T5148 189-191 IN denotes as
T5147 183-188 NNS denotes roles
T5146 177-182 PRP$ denotes their
T5145 173-176 CC denotes but
T5144 171-172 , denotes ,
T5143 166-171 NNS denotes loops
T5142 155-165 NN denotes inhibition
T5141 146-154 NN denotes feedback
T5140 138-145 JJ denotes classic
T5139 135-137 IN denotes in
T5138 131-134 VB denotes act
T5137 127-130 MD denotes can
T5136 122-126 WDT denotes that
T5135 111-121 NNS denotes inhibitors
T5134 104-110 NN denotes kinase
T5133 100-103 NNP denotes JAK
T5132 89-99 JJ denotes endogenous
T5131 86-88 IN denotes of
T5130 79-85 NN denotes family
T5129 77-78 DT denotes a
T5128 74-76 IN denotes as
T5127 63-73 VBN denotes identified
T5126 58-62 VBN denotes been
T5125 53-57 VBP denotes have
T5124 44-52 NNS denotes proteins
T5123 42-43 -RRB- denotes )
T5122 38-42 NNP denotes SOCS
T5121 37-38 -LRB- denotes (
T5120 27-36 VBG denotes signaling
T5119 18-26 NN denotes cytokine
T5118 15-17 IN denotes of
T5117 4-14 NN denotes suppressor
T5116 0-3 DT denotes The
R2161 T5165 T5127 punct .,identified
R2185 T5116 T5117 det The,suppressor
R2187 T5117 T5117 ROOT suppressor,suppressor
R2188 T5118 T5117 prep of,suppressor
R2189 T5119 T5118 pobj cytokine,of
R2191 T5120 T5117 acl signaling,suppressor
R2192 T5121 T5120 punct (,signaling
R2193 T5122 T5120 appos SOCS,signaling
R2195 T5123 T5120 punct ),signaling
R2196 T5124 T5127 nsubjpass proteins,identified
R2197 T5125 T5127 aux have,identified
R2199 T5126 T5127 auxpass been,identified
R2200 T5127 T5127 ROOT identified,identified
R2201 T5128 T5127 prep as,identified
R2203 T5129 T5130 det a,family
R2204 T5130 T5128 pobj family,as
R2206 T5131 T5130 prep of,family
R2207 T5132 T5135 amod endogenous,inhibitors
R2208 T5133 T5135 nmod JAK,inhibitors
R2209 T5134 T5135 compound kinase,inhibitors
R2211 T5135 T5131 pobj inhibitors,of
R2212 T5136 T5138 nsubj that,act
R2213 T5137 T5138 aux can,act
R2215 T5138 T5135 relcl act,inhibitors
R2216 T5139 T5138 prep in,act
R2217 T5140 T5143 amod classic,loops
R2219 T5141 T5142 compound feedback,inhibition
R2220 T5142 T5143 compound inhibition,loops
R2221 T5143 T5139 pobj loops,in
R2223 T5144 T5127 punct ",",identified
R2224 T5145 T5127 cc but,identified
R2225 T5146 T5147 poss their,roles
R2227 T5147 T5127 conj roles,identified
R2228 T5148 T5147 prep as,roles
R2229 T5149 T5150 det the,mediators
R2230 T5150 T5148 pobj mediators,as
R2232 T5151 T5150 prep of,mediators
R2233 T5152 T5153 compound crosstalk,inhibition
R2234 T5153 T5151 pobj inhibition,of
R2236 T5154 T5127 agent by,identified
R2237 T5155 T5154 pcomp opposing,by
R2238 T5156 T5155 dobj cytokine,opposing
R2240 T5157 T5155 conj signaling,opposing
R2241 T5158 T5161 nsubjpass pathways,clarified
R2243 T5159 T5161 aux have,clarified
R2244 T5160 T5161 auxpass been,clarified
R2245 T5161 T5157 ccomp clarified,signaling
R2247 T5162 T5164 nmod [,]
R2248 T5163 T5164 nummod 7,]
R2249 T5164 T5161 dobj ],clarified

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3745 111-121 Negative_regulation denotes inhibitors
T3744 100-110 Protein denotes JAK kinase
T3743 18-52 Protein denotes cytokine signaling (SOCS) proteins
R977 T3744 T3745 themeOf JAK kinase,inhibitors