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PMC:1064873 / 2294-2564 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T2194 255-260 Protein denotes STAT3
T2193 122-136 Protein denotes STAT3 proteins
T2192 112-117 Protein denotes STAT1
T2191 79-84 Protein denotes STAT1
T2190 67-71 Protein denotes STAT

2_test

Id Subject Object Predicate Lexical cue
15535835-7543512-4156864 86-87 7543512 denotes 3

biosemtest

Id Subject Object Predicate Lexical cue
T3101 212-220 UMLS/C0443264 denotes modulate
T3076 67-71 UMLS/C1548425 denotes STAT
T3036 137-141 UMLS/C0348078 denotes form
T3020 221-239 UMLS/C0040649 denotes gene transcription
T3013 112-117 UP/P42229 denotes STAT1
T3012 79-84 UP/P42229 denotes STAT1
T2937 95-110 UMLS/C0031715 denotes phosphorylation
T2822 212-220 UMLS/C1709059 denotes modulate
T2818 255-260 UMLS/C1367307 denotes STAT3
T2775 137-141 UMLS/C1522492 denotes form
T2774 137-141 UMLS/C0205431 denotes form
T2770 255-260 UMLS/C0253050 denotes STAT3
T2769 122-136 UMLS/C0253050 denotes STAT3 proteins
T2673 170-177 UMLS/C1637379 denotes rapidly
T2661 112-117 UMLS/C1335872 denotes STAT1
T2660 79-84 UMLS/C1335872 denotes STAT1
T3233 199-206 UMLS/C0007610 denotes nucleus
T3188 137-141 UMLS/C0013058 denotes form
T3177 67-71 UMLS/C1366753 denotes STAT
T3176 17-65 UMLS/C1366753 denotes signal transducer and activator of transcription
T3152 112-117 UP/P42224 denotes STAT1
T3117 79-84 UP/P42224 denotes STAT1
T2618 67-71 UMLS/C0205548 denotes STAT
T2530 67-71 UMLS/C1335960 denotes STAT
T2522 67-71 UMLS/C1420304 denotes STAT
T2606 137-141 UMLS/C0376315 denotes form

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4083 261-263 VB denotes is
T4082 255-260 NN denotes STAT3
T4081 253-254 -COMMA- denotes ,
T4080 241-253 RB denotes Intriguingly
T4079 226-239 NN denotes transcription
T4078 221-225 NN denotes gene
T4077 212-220 VB denotes modulate
T4076 208-211 CC denotes and
T4075 206-207 -COMMA- denotes ,
T4074 199-206 NN denotes nucleus
T4073 195-198 DT denotes the
T4072 190-194 IN denotes into
T4071 178-189 VB denotes translocate
T4070 170-177 RB denotes rapidly
T4069 168-169 -COMMA- denotes ,
T4068 156-168 NN denotes heterodimers
T4067 153-155 CC denotes or
T4066 142-152 NN denotes homodimers
T4065 137-141 VB denotes form
T4064 128-136 NN denotes proteins
T4063 122-127 NN denotes STAT3
T4062 118-121 CC denotes and
T4061 112-117 NN denotes STAT1
T4060 110-111 -COMMA- denotes ,
T4059 95-110 NN denotes phosphorylation
T4058 90-94 IN denotes Upon
T4057 87-88 -RRB- denotes ]
T4056 86-87 CD denotes 3
T4055 85-86 -LRB- denotes [
T4054 79-84 NN denotes STAT1
T4053 75-78 CC denotes and
T4052 73-74 CD denotes 3
T4051 71-72 -RRB- denotes )
T4050 67-71 NN denotes STAT
T4049 66-67 -LRB- denotes (
T4048 52-65 NN denotes transcription
T4047 49-51 IN denotes of
T4046 39-48 NN denotes activator
T4045 35-38 CC denotes and
T4044 24-34 NN denotes transducer
T4043 17-23 NN denotes signal
T4042 9-16 NN denotes factors
R1040 T4050 T4049 arg2Of STAT,(
R1041 T4051 T4049 arg3Of ),(
R1043 T4054 T4053 arg2Of STAT1,and
R1044 T4054 T4055 arg1Of STAT1,[
R1045 T4056 T4055 arg2Of 3,[
R1047 T4057 T4055 arg3Of ],[
R1052 T4059 T4058 arg2Of phosphorylation,Upon
R1056 T4061 T4062 arg1Of STAT1,and
R1059 T4063 T4062 arg2Of STAT3,and
R1064 T4064 T4061 arg1Of proteins,STAT1
R1074 T4064 T4063 arg1Of proteins,STAT3
R1075 T4064 T4065 arg1Of proteins,form
R1079 T4064 T4071 arg1Of proteins,translocate
R1080 T4064 T4077 arg1Of proteins,modulate
R1081 T4065 T4069 arg1Of form,","
R1082 T4066 T4067 arg1Of homodimers,or
R1085 T4067 T4065 arg2Of or,form
R1095 T4068 T4067 arg2Of heterodimers,or
R1096 T4069 T4058 arg1Of ",",Upon
R1104 T4069 T4060 arg1Of ",",","
R1106 T4071 T4072 arg1Of translocate,into
R1111 T4071 T4076 arg1Of translocate,and
R1114 T4074 T4072 arg2Of nucleus,into
R1120 T4074 T4073 arg1Of nucleus,the
R1121 T4076 T4069 arg2Of and,","
R1136 T4076 T4070 arg1Of and,rapidly
R1140 T4076 T4075 arg1Of and,","
R1143 T4077 T4076 arg2Of modulate,and
R1147 T4079 T4077 arg2Of transcription,modulate
R1149 T4079 T4078 arg1Of transcription,gene
R1152 T4082 T4083 arg1Of STAT3,is
R1157 T4083 T4080 arg1Of is,Intriguingly
R1160 T4083 T4081 arg1Of is,","
R1165 T4044 T4045 arg1Of transducer,and
R1166 T4046 T4045 arg2Of activator,and
R1171 T4048 T4042 arg1Of transcription,factors
R1172 T4048 T4043 arg1Of transcription,signal
R1173 T4048 T4044 arg1Of transcription,transducer
R1174 T4048 T4046 arg1Of transcription,activator
R1175 T4048 T4047 arg1Of transcription,of
R1176 T4048 T4049 arg1Of transcription,(
R1177 T4048 T4052 arg1Of transcription,3

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3480 255-260 Protein denotes STAT3
T3479 122-127 Protein denotes STAT3
T3478 112-117 Protein denotes STAT1
T3477 79-84 Protein denotes STAT1
T3476 17-74 Protein denotes signal transducer and activator of transcription (STAT) 3

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3694 255-260 http://www.uniprot.org/uniprot/P40763 denotes STAT3
T3693 122-127 http://www.uniprot.org/uniprot/P40763 denotes STAT3

GO-BP

Id Subject Object Predicate Lexical cue
T3273 95-110 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation
T3279 17-23 http://purl.obolibrary.org/obo/GO_0023052 denotes signal
T3278 226-239 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T3277 52-65 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-CC

Id Subject Object Predicate Lexical cue
T3579 199-206 http://purl.obolibrary.org/obo/GO_0005634 denotes nucleus

sentences

Id Subject Object Predicate Lexical cue
T3238 90-240 Sentence denotes Upon phosphorylation, STAT1 and STAT3 proteins form homodimers or heterodimers, rapidly translocate into the nucleus, and modulate gene transcription.
T15 90-240 Sentence denotes Upon phosphorylation, STAT1 and STAT3 proteins form homodimers or heterodimers, rapidly translocate into the nucleus, and modulate gene transcription.

simple1

Id Subject Object Predicate Lexical cue
T3883 255-260 Protein denotes STAT3
T3882 122-127 Protein denotes STAT3
T3881 112-117 Protein denotes STAT1
T3880 79-84 Protein denotes STAT1
T3879 17-74 Protein denotes signal transducer and activator of transcription (STAT) 3

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T6458 178-189 Localization denotes translocate
T6457 95-110 Phosphorylation denotes phosphorylation
T6393 255-260 Protein denotes STAT3
T6392 122-127 Protein denotes STAT3
T6391 112-117 Protein denotes STAT1
T6390 79-84 Protein denotes STAT1
T6389 17-74 Protein denotes signal transducer and activator of transcription (STAT) 3
R3161 T6391 T6458 themeOf STAT1,translocate
R3162 T6391 T6457 themeOf STAT1,phosphorylation
R3163 T6392 T6458 themeOf STAT3,translocate

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4896 178-189 Localization denotes translocate
T4831 255-260 Protein denotes STAT3
T4830 122-127 Protein denotes STAT3
T4829 112-117 Protein denotes STAT1
T4828 79-84 Protein denotes STAT1
T4827 17-74 Protein denotes signal transducer and activator of transcription (STAT) 3
R1887 T4829 T4896 themeOf STAT1,translocate
R1888 T4830 T4896 themeOf STAT3,translocate

DLUT931

Id Subject Object Predicate Lexical cue
T5909 212-220 Regulation denotes modulate
T5908 178-189 Localization denotes translocate
T5907 95-110 Phosphorylation denotes phosphorylation
T5843 255-260 Protein denotes STAT3
T5842 122-127 Protein denotes STAT3
T5841 112-117 Protein denotes STAT1
T5840 79-84 Protein denotes STAT1
T5839 17-74 Protein denotes signal transducer and activator of transcription (STAT) 3
R2912 T5841 T5907 themeOf STAT1,phosphorylation
R2913 T5841 T5908 themeOf STAT1,translocate
R2914 T5841 T5909 themeOf STAT1,modulate
R2915 T5842 T5907 themeOf STAT3,phosphorylation
R2916 T5842 T5908 themeOf STAT3,translocate
R2917 T5842 T5909 themeOf STAT3,modulate
R2953 T5907 T5909 themeOf phosphorylation,modulate
R2954 T5907 T5909 themeOf phosphorylation,modulate

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T6250 112-117 Protein denotes STAT1
T6347 221-239 Transcription denotes gene transcription
T6345 112-239 Regulation denotes STAT1 and STAT3 proteins form homodimers or heterodimers, rapidly translocate into the nucleus, and modulate gene transcription
T6344 112-239 Regulation denotes STAT1 and STAT3 proteins form homodimers or heterodimers, rapidly translocate into the nucleus, and modulate gene transcription
T6283 79-88 Protein denotes STAT1 [3]
T6190 255-260 Protein denotes STAT3
T6188 156-207 Entity denotes heterodimers, rapidly translocate into the nucleus,
T6168 142-152 Entity denotes homodimers
T6241 195-206 Entity denotes the nucleus
T6199 221-225 Protein denotes gene
T6272 122-127 Protein denotes STAT3
T6311 122-136 Protein denotes STAT3 proteins
R3098 T6199 T6347 themeOf gene,gene transcription
R3123 T6250 T6345 causeOf STAT1,"STAT1 and STAT3 proteins form homodimers or heterodimers, rapidly translocate into the nucleus, and modulate gene transcription"
R3134 T6311 T6344 causeOf STAT3 proteins,"STAT1 and STAT3 proteins form homodimers or heterodimers, rapidly translocate into the nucleus, and modulate gene transcription"
R3144 T6347 T6344 themeOf gene transcription,"STAT1 and STAT3 proteins form homodimers or heterodimers, rapidly translocate into the nucleus, and modulate gene transcription"
R3147 T6347 T6345 themeOf gene transcription,"STAT1 and STAT3 proteins form homodimers or heterodimers, rapidly translocate into the nucleus, and modulate gene transcription"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5063 261-263 VBZ denotes is
T5062 255-260 NNP denotes STAT3
T5061 253-254 , denotes ,
T5060 241-253 RB denotes Intriguingly
T5059 239-240 . denotes .
T5058 226-239 NN denotes transcription
T5057 221-225 NN denotes gene
T5056 212-220 VB denotes modulate
T5055 208-211 CC denotes and
T5054 206-207 , denotes ,
T5053 199-206 NN denotes nucleus
T5052 195-198 DT denotes the
T5051 190-194 IN denotes into
T5050 178-189 VBP denotes translocate
T5049 170-177 RB denotes rapidly
T5048 168-169 , denotes ,
T5047 156-168 NNS denotes heterodimers
T5046 153-155 CC denotes or
T5045 142-152 NNS denotes homodimers
T5044 137-141 VBP denotes form
T5043 128-136 NNS denotes proteins
T5042 122-127 NNP denotes STAT3
T5041 118-121 CC denotes and
T5040 112-117 NNP denotes STAT1
T5039 110-111 , denotes ,
T5038 95-110 NN denotes phosphorylation
T5037 90-94 IN denotes Upon
T5036 88-89 . denotes .
T5035 87-88 NNP denotes ]
T5034 86-87 CD denotes 3
T5033 85-86 NN denotes [
T5032 79-84 CD denotes STAT1
T5031 75-78 CC denotes and
T5030 73-74 CD denotes 3
T5029 71-72 -RRB- denotes )
T5028 67-71 NNP denotes STAT
T5027 66-67 -LRB- denotes (
T5026 52-65 NN denotes transcription
T5025 49-51 IN denotes of
T5024 39-48 NN denotes activator
T5023 35-38 CC denotes and
T5022 24-34 NN denotes transducer
T5021 17-23 VBP denotes signal
T5020 9-16 NNS denotes factors
R2057 T5022 T5021 dobj transducer,signal
R2058 T5023 T5022 cc and,transducer
R2060 T5024 T5022 conj activator,transducer
R2061 T5025 T5024 prep of,activator
R2062 T5026 T5025 pobj transcription,of
R2064 T5027 T5026 punct (,transcription
R2065 T5028 T5026 appos STAT,transcription
R2066 T5029 T5026 punct ),transcription
R2069 T5030 T5026 nummod 3,transcription
R2071 T5031 T5024 cc and,activator
R2072 T5032 T5033 nummod STAT1,[
R2073 T5033 T5024 conj [,activator
R2075 T5034 T5035 nummod 3,]
R2076 T5035 T5033 appos ],[
R2078 T5037 T5044 prep Upon,form
R2079 T5038 T5037 pobj phosphorylation,Upon
R2080 T5039 T5044 punct ",",form
R2082 T5040 T5043 nmod STAT1,proteins
R2083 T5041 T5040 cc and,STAT1
R2084 T5042 T5040 conj STAT3,STAT1
R2086 T5043 T5044 nsubj proteins,form
R2087 T5044 T5044 ROOT form,form
R2088 T5045 T5044 dobj homodimers,form
R2090 T5046 T5045 cc or,homodimers
R2091 T5047 T5045 conj heterodimers,homodimers
R2092 T5048 T5044 punct ",",form
R2094 T5049 T5050 advmod rapidly,translocate
R2095 T5050 T5044 conj translocate,form
R2096 T5051 T5050 prep into,translocate
R2098 T5052 T5053 det the,nucleus
R2099 T5053 T5051 pobj nucleus,into
R2100 T5054 T5050 punct ",",translocate
R2102 T5055 T5050 cc and,translocate
R2103 T5056 T5050 conj modulate,translocate
R2104 T5057 T5058 compound gene,transcription
R2106 T5058 T5056 dobj transcription,modulate
R2107 T5059 T5044 punct .,form
R2108 T5060 T5063 advmod Intriguingly,is
R2110 T5061 T5063 punct ",",is
R2111 T5062 T5063 nsubj STAT3,is
R2112 T5063 T5063 ROOT is,is

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3737 255-260 Protein denotes STAT3
T3736 178-189 Localization denotes translocate
T3735 178-189 Localization denotes translocate
T3734 199-206 Entity denotes nucleus
T3733 95-110 Phosphorylation denotes phosphorylation
T3732 95-110 Phosphorylation denotes phosphorylation
T3731 122-136 Protein denotes STAT3 proteins
T3730 112-117 Protein denotes STAT1
R969 T3730 T3732 themeOf STAT1,phosphorylation
R970 T3730 T3735 themeOf STAT1,translocate
R971 T3731 T3733 themeOf STAT3 proteins,phosphorylation
R972 T3731 T3736 themeOf STAT3 proteins,translocate
R973 T3734 T3735 locationOf nucleus,translocate
R974 T3734 T3736 locationOf nucleus,translocate

test3

Id Subject Object Predicate Lexical cue
T2349 255-260 Protein denotes STAT3
T2348 178-189 Localization denotes translocate
T2347 122-127 Protein denotes STAT3
T2346 112-117 Protein denotes STAT1
T2345 95-110 Phosphorylation denotes phosphorylation
T2344 79-84 Protein denotes STAT1
T2343 17-74 Protein denotes signal transducer and activator of transcription (STAT) 3
T2275 255-260 Protein denotes STAT3
T2274 122-127 Protein denotes STAT3
T2273 112-117 Protein denotes STAT1
T2272 79-84 Protein denotes STAT1
T2271 17-74 Protein denotes signal transducer and activator of transcription (STAT) 3
R790 T2346 T2348 themeOf STAT1,translocate
R791 T2346 T2345 themeOf STAT1,phosphorylation
R792 T2347 T2345 themeOf STAT3,phosphorylation
R793 T2347 T2348 themeOf STAT3,translocate

testone

Id Subject Object Predicate Lexical cue
T2098 255-260 Protein denotes STAT3
T2097 122-127 Protein denotes STAT3
T2096 112-117 Protein denotes STAT1
T2095 79-84 Protein denotes STAT1
T2094 17-74 Protein denotes signal transducer and activator of transcription (STAT) 3
T2154 199-206 Entity denotes nucleus
T2153 178-189 Localization denotes translocate
T2152 95-110 Phosphorylation denotes phosphorylation
R729 T2096 T2153 themeOf STAT1,translocate
R730 T2096 T2152 themeOf STAT1,phosphorylation
R731 T2097 T2152 themeOf STAT3,phosphorylation
R732 T2097 T2153 themeOf STAT3,translocate
R760 T2154 T2153 locationOf nucleus,translocate