PMC:1064873 / 199-382
Annnotations
LappsTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T429 | 6-11 | I_ACTION | denotes | block |
| T420 | 103-108 | OCCURRENCE | denotes | found |
| T417 | 61-71 | OCCURRENCE | denotes | inhibiting |
| T390 | 100-102 | stop | denotes | We |
| T389 | 58-60 | country_code | denotes | by |
| T388 | 3-5 | country_code | denotes | to |
| T138 | 170-180 | NN | denotes | rheumatoid |
| T137 | 163-169 | JJ | denotes | active |
| T136 | 158-162 | IN | denotes | with |
| T135 | 149-157 | NNS | denotes | patients |
| T134 | 144-148 | IN | denotes | from |
| T133 | 138-143 | NNS | denotes | cells |
| T132 | 136-137 | NN | denotes | T |
| T131 | 134-135 | NN | denotes | + |
| T130 | 133-134 | CD | denotes | 4 |
| T129 | 131-133 | NNP | denotes | CD |
| T128 | 125-130 | NN | denotes | blood |
| T127 | 114-124 | JJ | denotes | peripheral |
| T126 | 109-113 | IN | denotes | that |
| T125 | 103-108 | VBD | denotes | found |
| T124 | 100-102 | PRP | denotes | We |
| T123 | 98-99 | . | denotes | . |
| T122 | 91-98 | NN | denotes | pathway |
| T121 | 81-90 | VBG | denotes | signaling |
| T120 | 78-80 | CD | denotes | 28 |
| T119 | 76-78 | NNP | denotes | CD |
| T118 | 72-75 | DT | denotes | the |
| T117 | 61-71 | VBG | denotes | inhibiting |
| T116 | 58-60 | IN | denotes | by |
| T115 | 49-57 | NN | denotes | response |
| T114 | 40-48 | NN | denotes | cytokine |
| T113 | 35-39 | NN | denotes | cell |
| T112 | 33-35 | NNP | denotes | T- |
| T111 | 16-32 | JJ | denotes | antigen-specific |
| T110 | 12-15 | DT | denotes | the |
| T109 | 6-11 | VB | denotes | block |
| T108 | 3-5 | TO | denotes | to |
biosemtest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T879 | 76-80 | UMLS/C1332709 | denotes | CD28 |
| T876 | 16-23 | UMLS/C0003320 | denotes | antigen |
| T844 | 76-80 | UMLS/C1426202 | denotes | CD28 |
| T828 | 149-157 | UMLS/C1705908 | denotes | patients |
| T826 | 24-32 | UMLS/C1552740 | denotes | specific |
| T808 | 103-108 | UMLS/C0243095 | denotes | found |
| T716 | 163-169 | UMLS/C1553875 | denotes | active |
| T701 | 136-143 | UMLS/C0039194 | denotes | T cells |
| T700 | 33-39 | UMLS/C0039194 | denotes | T-cell |
| T698 | 24-32 | UMLS/C0205369 | denotes | specific |
| T690 | 114-130 | UMLS/C0229664 | denotes | peripheral blood |
| T688 | 76-80 | UMLS/C0075747 | denotes | CD28 |
| T596 | 40-48 | UMLS/C1524094 | denotes | cytokine |
| T583 | 149-157 | UMLS/C0030705 | denotes | patients |
| T563 | 149-157 | UMLS/C1578479 | denotes | patients |
| T556 | 149-157 | UMLS/C1578483 | denotes | patients |
| T552 | 149-157 | UMLS/C1578480 | denotes | patients |
| T548 | 149-157 | UMLS/C1578481 | denotes | patients |
| T543 | 149-157 | UMLS/C1578486 | denotes | patients |
| T538 | 149-157 | UMLS/C1578484 | denotes | patients |
| T536 | 6-11 | UMLS/C0332206 | denotes | block |
| T533 | 149-157 | UMLS/C1578485 | denotes | patients |
| T528 | 6-11 | UMLS/C1706084 | denotes | block |
| T524 | 163-169 | UMLS/C1561511 | denotes | active |
| T523 | 163-169 | UMLS/C1561512 | denotes | active |
| T522 | 163-169 | UMLS/C1561513 | denotes | active |
| T519 | 49-57 | UMLS/C1704632 | denotes | response |
| T517 | 81-98 | UMLS/C0086982 | denotes | signaling pathway |
| T515 | 6-11 | UMLS/C1533157 | denotes | block |
| T512 | 163-169 | UMLS/C0205177 | denotes | active |
| T462 | 163-169 | UMLS/C1561510 | denotes | active |
| T461 | 6-11 | UMLS/C0233660 | denotes | block |
| T460 | 163-169 | UMLS/C1561509 | denotes | active |
| T459 | 163-169 | UMLS/C1561508 | denotes | active |
| T458 | 163-169 | UMLS/C1561507 | denotes | active |
| T443 | 163-169 | UMLS/C1547419 | denotes | active |
| T442 | 40-48 | UMLS/C0079189 | denotes | cytokine |
| T441 | 49-57 | UMLS/C0871261 | denotes | response |
| T768 | 103-108 | UMLS/C0037088 | denotes | found |
| T765 | 49-57 | UMLS/C1706817 | denotes | response |
| T760 | 81-98 | UMLS/C0037080 | denotes | signaling pathway |
| T750 | 149-157 | UMLS/C1550655 | denotes | patients |
| T731 | 61-71 | UMLS/C0021469 | denotes | inhibiting |
| T505 | 163-169 | UMLS/C2347179 | denotes | active |
| T482 | 3-5 | UMLS/C0319022 | denotes | to |
| T478 | 6-11 | UMLS/C0028778 | denotes | block |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1206 | 170-180 | JJ | denotes | rheumatoid |
| T1205 | 163-169 | JJ | denotes | active |
| T1204 | 158-162 | IN | denotes | with |
| T1203 | 149-157 | NN | denotes | patients |
| T1202 | 144-148 | IN | denotes | from |
| T1201 | 138-143 | NN | denotes | cells |
| T1200 | 136-137 | NN | denotes | T |
| T1199 | 131-135 | JJ | denotes | CD4+ |
| T1198 | 125-130 | NN | denotes | blood |
| T1197 | 114-124 | JJ | denotes | peripheral |
| T1196 | 109-113 | IN | denotes | that |
| T1195 | 103-108 | VB | denotes | found |
| T1194 | 100-102 | PRP | denotes | We |
| T1193 | 91-98 | NN | denotes | pathway |
| T1192 | 81-90 | NN | denotes | signaling |
| T1191 | 76-80 | NN | denotes | CD28 |
| T1190 | 72-75 | DT | denotes | the |
| T1189 | 61-71 | VB | denotes | inhibiting |
| T1188 | 58-60 | IN | denotes | by |
| T1187 | 49-57 | NN | denotes | response |
| T1186 | 40-48 | NN | denotes | cytokine |
| T1185 | 33-39 | NN | denotes | T-cell |
| T1184 | 16-32 | JJ | denotes | antigen-specific |
| T1183 | 12-15 | DT | denotes | the |
| T1182 | 6-11 | VB | denotes | block |
| T1181 | 3-5 | TO | denotes | to |
| R76 | T1182 | T1181 | arg1Of | block,to |
| R77 | T1182 | T1188 | arg1Of | block,by |
| R78 | T1187 | T1182 | arg2Of | response,block |
| R79 | T1187 | T1183 | arg1Of | response,the |
| R80 | T1187 | T1184 | arg1Of | response,antigen-specific |
| R81 | T1187 | T1185 | arg1Of | response,T-cell |
| R82 | T1187 | T1186 | arg1Of | response,cytokine |
| R83 | T1189 | T1188 | arg2Of | inhibiting,by |
| R84 | T1193 | T1189 | arg2Of | pathway,inhibiting |
| R85 | T1193 | T1190 | arg1Of | pathway,the |
| R86 | T1193 | T1191 | arg1Of | pathway,CD28 |
| R87 | T1193 | T1192 | arg1Of | pathway,signaling |
| R88 | T1194 | T1195 | arg1Of | We,found |
| R89 | T1201 | T1197 | arg1Of | cells,peripheral |
| R90 | T1201 | T1198 | arg1Of | cells,blood |
| R91 | T1201 | T1199 | arg1Of | cells,CD4+ |
| R92 | T1201 | T1200 | arg1Of | cells,T |
| R93 | T1201 | T1202 | arg1Of | cells,from |
| R97 | T1203 | T1202 | arg2Of | patients,from |
| R98 | T1203 | T1204 | arg1Of | patients,with |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T972 | 76-80 | Protein | denotes | CD28 |
| T973 | 131-134 | Protein | denotes | CD4 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1049 | 76-80 | http://www.uniprot.org/uniprot/P10747 | denotes | CD28 |
| T1041 | 131-134 | http://www.uniprot.org/uniprot/P01730 | denotes | CD4 |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T434 | 125-130 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T906 | 81-98 | http://purl.obolibrary.org/obo/GO_0007165 | denotes | signaling pathway |
| T905 | 40-57 | http://purl.obolibrary.org/obo/GO_0034097 | denotes | cytokine response |
| T904 | 33-48 | http://purl.obolibrary.org/obo/GO_0002369 | denotes | T-cell cytokine |
| T899 | 81-90 | http://purl.obolibrary.org/obo/GO_0023052 | denotes | signaling |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1015 | 138-143 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1127 | 76-80 | Protein | denotes | CD28 |
| T1128 | 131-134 | Protein | denotes | CD4 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1928 | 131-134 | Protein | denotes | CD4 |
| T1924 | 76-80 | Protein | denotes | CD28 |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1424 | 131-134 | Protein | denotes | CD4 |
| T1420 | 76-80 | Protein | denotes | CD28 |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1469 | 131-134 | Protein | denotes | CD4 |
| T1465 | 76-80 | Protein | denotes | CD28 |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1907 | 12-58 | Localization | denotes | the antigen-specific T-cell cytokine response |
| T1905 | 16-32 | Entity | denotes | antigen-specific |
| T1893 | 76-80 | Protein | denotes | CD28 |
| T1881 | 33-39 | Entity | denotes | T-cell |
| T1871 | 12-57 | Protein | denotes | the antigen-specific T-cell cytokine response |
| T1866 | 131-134 | Protein | denotes | CD4 |
| R612 | T1871 | T1907 | themeOf | the antigen-specific T-cell cytokine response,the antigen-specific T-cell cytokine response |
| R617 | T1881 | T1907 | locationOf | T-cell,the antigen-specific T-cell cytokine response |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1604 | 170-180 | JJ | denotes | rheumatoid |
| T1603 | 163-169 | JJ | denotes | active |
| T1602 | 158-162 | IN | denotes | with |
| T1601 | 149-157 | NNS | denotes | patients |
| T1600 | 144-148 | IN | denotes | from |
| T1577 | 3-5 | TO | denotes | to |
| T1578 | 6-11 | VB | denotes | block |
| T1579 | 12-15 | DT | denotes | the |
| T1580 | 16-32 | JJ | denotes | antigen-specific |
| T1581 | 33-39 | NN | denotes | T-cell |
| T1582 | 40-48 | NN | denotes | cytokine |
| T1583 | 49-57 | NN | denotes | response |
| T1584 | 58-60 | IN | denotes | by |
| T1585 | 61-71 | VBG | denotes | inhibiting |
| T1586 | 72-75 | DT | denotes | the |
| T1587 | 76-80 | NNP | denotes | CD28 |
| T1588 | 81-90 | VBG | denotes | signaling |
| T1589 | 91-98 | NN | denotes | pathway |
| T1590 | 98-99 | . | denotes | . |
| T1591 | 100-102 | PRP | denotes | We |
| T1592 | 103-108 | VBD | denotes | found |
| T1593 | 109-113 | IN | denotes | that |
| T1594 | 114-124 | JJ | denotes | peripheral |
| T1595 | 125-130 | NN | denotes | blood |
| T1596 | 131-134 | NNP | denotes | CD4 |
| T1597 | 134-135 | NNP | denotes | + |
| T1598 | 136-137 | NNP | denotes | T |
| T1599 | 138-143 | NNS | denotes | cells |
| R373 | T1600 | T1599 | prep | from,cells |
| R374 | T1601 | T1600 | pobj | patients,from |
| R375 | T1602 | T1601 | prep | with,patients |
| R688 | T1577 | T1578 | aux | to,block |
| R690 | T1579 | T1583 | det | the,response |
| R691 | T1580 | T1583 | amod | antigen-specific,response |
| R692 | T1581 | T1583 | compound | T-cell,response |
| R693 | T1582 | T1583 | compound | cytokine,response |
| R694 | T1583 | T1578 | dobj | response,block |
| R695 | T1584 | T1578 | prep | by,block |
| R696 | T1585 | T1584 | pcomp | inhibiting,by |
| R697 | T1586 | T1587 | det | the,CD28 |
| R698 | T1587 | T1585 | dobj | CD28,inhibiting |
| R699 | T1588 | T1585 | conj | signaling,inhibiting |
| R700 | T1589 | T1588 | dobj | pathway,signaling |
| R702 | T1591 | T1592 | nsubj | We,found |
| R703 | T1592 | T1592 | ROOT | found,found |
| R705 | T1594 | T1595 | amod | peripheral,blood |
| R706 | T1595 | T1599 | compound | blood,cells |
| R707 | T1596 | T1599 | compound | CD4,cells |
| R708 | T1597 | T1599 | compound | +,cells |
| R709 | T1598 | T1599 | compound | T,cells |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1095 | 76-80 | Protein | denotes | CD28 |
| T1096 | 61-71 | Negative_regulation | denotes | inhibiting |
| T1097 | 131-135 | Protein | denotes | CD4+ |
| R654 | T1095 | T1096 | themeOf | CD28,inhibiting |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T38 | 131-134 | Protein | denotes | CD4 |
| T37 | 76-80 | Protein | denotes | CD28 |