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PMC:1064873 / 198-391 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T429 7-12 I_ACTION denotes block
T420 104-109 OCCURRENCE denotes found
T417 62-72 OCCURRENCE denotes inhibiting
T390 101-103 stop denotes We
T389 59-61 country_code denotes by
T388 4-6 country_code denotes to
T140 192-193 ( denotes (
T139 182-191 NN denotes arthritis
T138 171-181 NN denotes rheumatoid
T137 164-170 JJ denotes active
T136 159-163 IN denotes with
T135 150-158 NNS denotes patients
T134 145-149 IN denotes from
T133 139-144 NNS denotes cells
T132 137-138 NN denotes T
T131 135-136 NN denotes +
T130 134-135 CD denotes 4
T129 132-134 NNP denotes CD
T128 126-131 NN denotes blood
T127 115-125 JJ denotes peripheral
T126 110-114 IN denotes that
T125 104-109 VBD denotes found
T124 101-103 PRP denotes We
T123 99-100 . denotes .
T122 92-99 NN denotes pathway
T121 82-91 VBG denotes signaling
T120 79-81 CD denotes 28
T119 77-79 NNP denotes CD
T118 73-76 DT denotes the
T117 62-72 VBG denotes inhibiting
T116 59-61 IN denotes by
T115 50-58 NN denotes response
T114 41-49 NN denotes cytokine
T113 36-40 NN denotes cell
T112 34-36 NNP denotes T-
T111 17-33 JJ denotes antigen-specific
T110 13-16 DT denotes the
T109 7-12 VB denotes block
T108 4-6 TO denotes to

biosemtest

Id Subject Object Predicate Lexical cue
T879 77-81 UMLS/C1332709 denotes CD28
T876 17-24 UMLS/C0003320 denotes antigen
T844 77-81 UMLS/C1426202 denotes CD28
T828 150-158 UMLS/C1705908 denotes patients
T826 25-33 UMLS/C1552740 denotes specific
T808 104-109 UMLS/C0243095 denotes found
T716 164-170 UMLS/C1553875 denotes active
T701 137-144 UMLS/C0039194 denotes T cells
T700 34-40 UMLS/C0039194 denotes T-cell
T698 25-33 UMLS/C0205369 denotes specific
T690 115-131 UMLS/C0229664 denotes peripheral blood
T688 77-81 UMLS/C0075747 denotes CD28
T631 171-191 UMLS/C0003873 denotes rheumatoid arthritis
T596 41-49 UMLS/C1524094 denotes cytokine
T583 150-158 UMLS/C0030705 denotes patients
T563 150-158 UMLS/C1578479 denotes patients
T556 150-158 UMLS/C1578483 denotes patients
T552 150-158 UMLS/C1578480 denotes patients
T548 150-158 UMLS/C1578481 denotes patients
T543 150-158 UMLS/C1578486 denotes patients
T538 150-158 UMLS/C1578484 denotes patients
T536 7-12 UMLS/C0332206 denotes block
T533 150-158 UMLS/C1578485 denotes patients
T528 7-12 UMLS/C1706084 denotes block
T524 164-170 UMLS/C1561511 denotes active
T523 164-170 UMLS/C1561512 denotes active
T522 164-170 UMLS/C1561513 denotes active
T519 50-58 UMLS/C1704632 denotes response
T517 82-99 UMLS/C0086982 denotes signaling pathway
T515 7-12 UMLS/C1533157 denotes block
T512 164-170 UMLS/C0205177 denotes active
T462 164-170 UMLS/C1561510 denotes active
T461 7-12 UMLS/C0233660 denotes block
T460 164-170 UMLS/C1561509 denotes active
T459 164-170 UMLS/C1561508 denotes active
T458 164-170 UMLS/C1561507 denotes active
T443 164-170 UMLS/C1547419 denotes active
T442 41-49 UMLS/C0079189 denotes cytokine
T441 50-58 UMLS/C0871261 denotes response
T768 104-109 UMLS/C0037088 denotes found
T765 50-58 UMLS/C1706817 denotes response
T760 82-99 UMLS/C0037080 denotes signaling pathway
T750 150-158 UMLS/C1550655 denotes patients
T731 62-72 UMLS/C0021469 denotes inhibiting
T505 164-170 UMLS/C2347179 denotes active
T482 4-6 UMLS/C0319022 denotes to
T478 7-12 UMLS/C0028778 denotes block

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1208 192-193 -LRB- denotes (
T1207 182-191 NN denotes arthritis
T1206 171-181 JJ denotes rheumatoid
T1205 164-170 JJ denotes active
T1204 159-163 IN denotes with
T1203 150-158 NN denotes patients
T1202 145-149 IN denotes from
T1201 139-144 NN denotes cells
T1200 137-138 NN denotes T
T1199 132-136 JJ denotes CD4+
T1198 126-131 NN denotes blood
T1197 115-125 JJ denotes peripheral
T1196 110-114 IN denotes that
T1195 104-109 VB denotes found
T1194 101-103 PRP denotes We
T1193 92-99 NN denotes pathway
T1192 82-91 NN denotes signaling
T1191 77-81 NN denotes CD28
T1190 73-76 DT denotes the
T1189 62-72 VB denotes inhibiting
T1188 59-61 IN denotes by
T1187 50-58 NN denotes response
T1186 41-49 NN denotes cytokine
T1185 34-40 NN denotes T-cell
T1184 17-33 JJ denotes antigen-specific
T1183 13-16 DT denotes the
T1182 7-12 VB denotes block
T1181 4-6 TO denotes to
R76 T1182 T1181 arg1Of block,to
R77 T1182 T1188 arg1Of block,by
R78 T1187 T1182 arg2Of response,block
R79 T1187 T1183 arg1Of response,the
R80 T1187 T1184 arg1Of response,antigen-specific
R81 T1187 T1185 arg1Of response,T-cell
R82 T1187 T1186 arg1Of response,cytokine
R83 T1189 T1188 arg2Of inhibiting,by
R84 T1193 T1189 arg2Of pathway,inhibiting
R85 T1193 T1190 arg1Of pathway,the
R86 T1193 T1191 arg1Of pathway,CD28
R87 T1193 T1192 arg1Of pathway,signaling
R88 T1194 T1195 arg1Of We,found
R89 T1201 T1197 arg1Of cells,peripheral
R90 T1201 T1198 arg1Of cells,blood
R91 T1201 T1199 arg1Of cells,CD4+
R92 T1201 T1200 arg1Of cells,T
R93 T1201 T1202 arg1Of cells,from
R97 T1203 T1202 arg2Of patients,from
R98 T1203 T1204 arg1Of patients,with
R99 T1207 T1204 arg2Of arthritis,with
R100 T1207 T1205 arg1Of arthritis,active
R101 T1207 T1206 arg1Of arthritis,rheumatoid
R102 T1207 T1208 arg1Of arthritis,(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T972 77-81 Protein denotes CD28
T973 132-135 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1049 77-81 http://www.uniprot.org/uniprot/P10747 denotes CD28
T1041 132-135 http://www.uniprot.org/uniprot/P01730 denotes CD4

UBERON-AE

Id Subject Object Predicate Lexical cue
T434 126-131 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood

GO-BP

Id Subject Object Predicate Lexical cue
T906 82-99 http://purl.obolibrary.org/obo/GO_0007165 denotes signaling pathway
T905 41-58 http://purl.obolibrary.org/obo/GO_0034097 denotes cytokine response
T904 34-49 http://purl.obolibrary.org/obo/GO_0002369 denotes T-cell cytokine
T899 82-91 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

GO-CC

Id Subject Object Predicate Lexical cue
T1015 139-144 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

ICD10

Id Subject Object Predicate Lexical cue
T1026 171-191 http://purl.bioontology.org/ontology/ICD10/M06.9 denotes rheumatoid arthritis
T1028 182-191 http://purl.bioontology.org/ontology/ICD10/M13.9 denotes arthritis

simple1

Id Subject Object Predicate Lexical cue
T1127 77-81 Protein denotes CD28
T1128 132-135 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1928 132-135 Protein denotes CD4
T1924 77-81 Protein denotes CD28

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1424 132-135 Protein denotes CD4
T1420 77-81 Protein denotes CD28

DLUT931

Id Subject Object Predicate Lexical cue
T1469 132-135 Protein denotes CD4
T1465 77-81 Protein denotes CD28

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1907 13-59 Localization denotes the antigen-specific T-cell cytokine response
T1905 17-33 Entity denotes antigen-specific
T1893 77-81 Protein denotes CD28
T1881 34-40 Entity denotes T-cell
T1871 13-58 Protein denotes the antigen-specific T-cell cytokine response
T1866 132-135 Protein denotes CD4
R612 T1871 T1907 themeOf the antigen-specific T-cell cytokine response,the antigen-specific T-cell cytokine response
R617 T1881 T1907 locationOf T-cell,the antigen-specific T-cell cytokine response

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1606 192-193 -LRB- denotes (
T1605 182-191 NNS denotes arthritis
T1604 171-181 JJ denotes rheumatoid
T1603 164-170 JJ denotes active
T1602 159-163 IN denotes with
T1601 150-158 NNS denotes patients
T1600 145-149 IN denotes from
T1577 4-6 TO denotes to
T1578 7-12 VB denotes block
T1579 13-16 DT denotes the
T1580 17-33 JJ denotes antigen-specific
T1581 34-40 NN denotes T-cell
T1582 41-49 NN denotes cytokine
T1583 50-58 NN denotes response
T1584 59-61 IN denotes by
T1585 62-72 VBG denotes inhibiting
T1586 73-76 DT denotes the
T1587 77-81 NNP denotes CD28
T1588 82-91 VBG denotes signaling
T1589 92-99 NN denotes pathway
T1590 99-100 . denotes .
T1591 101-103 PRP denotes We
T1592 104-109 VBD denotes found
T1593 110-114 IN denotes that
T1594 115-125 JJ denotes peripheral
T1595 126-131 NN denotes blood
T1596 132-135 NNP denotes CD4
T1597 135-136 NNP denotes +
T1598 137-138 NNP denotes T
T1599 139-144 NNS denotes cells
R373 T1600 T1599 prep from,cells
R374 T1601 T1600 pobj patients,from
R375 T1602 T1601 prep with,patients
R376 T1603 T1605 amod active,arthritis
R377 T1604 T1605 amod rheumatoid,arthritis
R378 T1605 T1602 pobj arthritis,with
R379 T1606 T1605 punct (,arthritis
R688 T1577 T1578 aux to,block
R690 T1579 T1583 det the,response
R691 T1580 T1583 amod antigen-specific,response
R692 T1581 T1583 compound T-cell,response
R693 T1582 T1583 compound cytokine,response
R694 T1583 T1578 dobj response,block
R695 T1584 T1578 prep by,block
R696 T1585 T1584 pcomp inhibiting,by
R697 T1586 T1587 det the,CD28
R698 T1587 T1585 dobj CD28,inhibiting
R699 T1588 T1585 conj signaling,inhibiting
R700 T1589 T1588 dobj pathway,signaling
R702 T1591 T1592 nsubj We,found
R703 T1592 T1592 ROOT found,found
R705 T1594 T1595 amod peripheral,blood
R706 T1595 T1599 compound blood,cells
R707 T1596 T1599 compound CD4,cells
R708 T1597 T1599 compound +,cells
R709 T1598 T1599 compound T,cells

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1095 77-81 Protein denotes CD28
T1096 62-72 Negative_regulation denotes inhibiting
T1097 132-136 Protein denotes CD4+
R654 T1095 T1096 themeOf CD28,inhibiting

testone

Id Subject Object Predicate Lexical cue
T38 132-135 Protein denotes CD4
T37 77-81 Protein denotes CD28