PMC:1064873 / 13761-14709
Annnotations
LappsTest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10612 | 925-930 | Protein | denotes | STAT1 |
| T10611 | 847-859 | Protein | denotes | STAT protein |
| T10610 | 788-792 | Protein | denotes | STAT |
| T10609 | 558-582 | Protein | denotes | anti-rabbit IgG antibody |
| T10608 | 384-398 | Protein | denotes | STAT3 antibody |
| T10607 | 307-342 | Protein | denotes | STAT1 antibody, anti-STAT3 antibody |
| T10606 | 238-269 | Protein | denotes | rabbit IgG) anti-STAT1 antibody |
| T10605 | 38-43 | Protein | denotes | STAT3 |
| T10604 | 28-33 | Protein | denotes | STAT1 |
biosemtest
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10710 | 932-937 | UP/P42229 | denotes | hosop |
| T10859 | 932-937 | UP/P42224 | denotes | hosop |
| T10924 | 885-895 | UMLS/C0018873 | denotes | lls were u |
| T10923 | 911-927 | UMLS/C1883676 | denotes | e control for ST |
| T10921 | 90-94 | UMLS/C1704742 | denotes | Cell |
| T10920 | 90-94 | UMLS/C0812225 | denotes | Cell |
| T10919 | 173-185 | UMLS/C1442085 | denotes | ctions. Brie |
| T10918 | 158-172 | UMLS/C1546933 | denotes | cturer's instr |
| T10916 | 726-731 | UMLS/C0175723 | denotes | were |
| T10915 | 580-588 | UMLS/C0003241 | denotes | dy dilut |
| T10914 | 497-505 | UMLS/C0003241 | denotes | dy bindi |
| T10913 | 396-404 | UMLS/C0003241 | denotes | dy, dilu |
| T10912 | 340-348 | UMLS/C0003241 | denotes | dy, and |
| T10911 | 319-327 | UMLS/C0003241 | denotes | dy, anti |
| T10910 | 267-275 | UMLS/C0003241 | denotes | dy, anti |
| T10909 | 232-242 | UMLS/C0003241 | denotes | dies (rabb |
| T10907 | 843-849 | UMLS/C1265611 | denotes | of ST |
| T10905 | 837-842 | UMLS/C0439810 | denotes | amoun |
| T10898 | 660-663 | UP/P02769 | denotes | nd |
| T10897 | 492-495 | UP/P02769 | denotes | nti |
| T10891 | 158-172 | UMLS/C1705426 | denotes | cturer's instr |
| T10888 | 506-513 | UMLS/C0243122 | denotes | g was d |
| T10885 | 853-865 | UMLS/C1366753 | denotes | rotein. IFN- |
| T10884 | 794-798 | UMLS/C1366753 | denotes | hosp |
| T10882 | 518-526 | UMLS/C0442726 | denotes | ed by ho |
| T10881 | 54-62 | UMLS/C0442726 | denotes | ed using |
| T10804 | 173-185 | UMLS/C0039401 | denotes | ctions. Brie |
| T10799 | 643-651 | UMLS/C0041415 | denotes | 20 with |
| T10798 | 475-483 | UMLS/C0041415 | denotes | 20 with |
| T10790 | 932-937 | UMLS/C1335872 | denotes | hosop |
| T10789 | 313-318 | UMLS/C1335872 | denotes | antib |
| T10788 | 34-39 | UMLS/C1335872 | denotes | and S |
| T10784 | 751-763 | UMLS/C0011321 | denotes | ometry using |
| T10783 | 417-428 | UMLS/C0034866 | denotes | ended at 1/ |
| T10782 | 553-563 | UMLS/C0301869 | denotes | ated anti- |
| T10774 | 518-526 | UMLS/C1511790 | denotes | ed by ho |
| T10773 | 54-62 | UMLS/C1511790 | denotes | ed using |
| T10767 | 660-663 | UMLS/C0005902 | denotes | nd |
| T10766 | 492-495 | UMLS/C0005902 | denotes | nti |
| T10765 | 173-185 | UMLS/C0220931 | denotes | ctions. Brie |
| T10764 | 173-185 | UMLS/C1292796 | denotes | ctions. Brie |
| T10763 | 589-596 | UMLS/C1948037 | denotes | d at 1/ |
| T10762 | 406-413 | UMLS/C1948037 | denotes | d as re |
| T10761 | 80-89 | UMLS/C0470187 | denotes | ble kits |
| T10757 | 794-798 | UMLS/C0205548 | denotes | hosp |
| T10753 | 873-884 | UMLS/C1948023 | denotes | ated Hela c |
| T10743 | 660-663 | UMLS/C0036774 | denotes | nd |
| T10742 | 492-495 | UMLS/C0036774 | denotes | nti |
| T10738 | 69-79 | UMLS/C0680536 | denotes | cial avail |
| T10734 | 794-798 | UMLS/C1335960 | denotes | hosp |
| T10732 | 111-121 | UMLS/C0039421 | denotes | logy, Beve |
| T10731 | 660-663 | UMLS/C1511233 | denotes | nd |
| T10730 | 492-495 | UMLS/C1511233 | denotes | nti |
| T10729 | 553-563 | UMLS/C0522529 | denotes | ated anti- |
| T10727 | 794-798 | UMLS/C1420304 | denotes | hosp |
| T10719 | 580-588 | UMLS/C0021027 | denotes | dy dilut |
| T10718 | 497-505 | UMLS/C0021027 | denotes | dy bindi |
| T10717 | 396-404 | UMLS/C0021027 | denotes | dy, dilu |
| T10716 | 340-348 | UMLS/C0021027 | denotes | dy, and |
| T10715 | 319-327 | UMLS/C0021027 | denotes | dy, anti |
| T10714 | 267-275 | UMLS/C0021027 | denotes | dy, anti |
| T10713 | 232-242 | UMLS/C0021027 | denotes | dies (rabb |
| T10711 | 244-250 | UMLS/C1446777 | denotes | IgG) |
| T10709 | 313-318 | UP/P42229 | denotes | antib |
| T10708 | 34-39 | UP/P42229 | denotes | and S |
| T10703 | 530-552 | UMLS/C0019941 | denotes | adish peroxidase-conju |
| T10702 | 718-725 | UMLS/C0033684 | denotes | n bands |
| T10699 | 843-849 | UMLS/C1561574 | denotes | of ST |
| T10698 | 506-513 | UMLS/C1167622 | denotes | g was d |
| T10695 | 136-139 | UMLS/C0041703 | denotes | cco |
| T10693 | 780-788 | UMLS/C1524024 | denotes | is, and |
| T10687 | 374-382 | UMLS/C1880236 | denotes | ne 705 o |
| T10686 | 297-305 | UMLS/C1880236 | denotes | ne 701 o |
| T10683 | 692-709 | UMLS/C1450278 | denotes | uminescence syste |
| T10680 | 151-153 | UMLS/C0319022 | denotes | m |
| T10677 | 589-596 | UMLS/C1720119 | denotes | d at 1/ |
| T10676 | 406-413 | UMLS/C1720119 | denotes | d as re |
| T10667 | 576-579 | UMLS/C0020852 | denotes | tib |
| T10666 | 251-254 | UMLS/C0020852 | denotes | nti |
| T10662 | 799-814 | UMLS/C0031715 | denotes | orylation was c |
| T10660 | 506-513 | UMLS/C1145667 | denotes | g was d |
| T10658 | 244-250 | UMLS/C0034493 | denotes | IgG) |
| T10657 | 506-513 | UMLS/C2349209 | denotes | g was d |
| T10655 | 374-382 | UMLS/C0041485 | denotes | ne 705 o |
| T10654 | 297-305 | UMLS/C0041485 | denotes | ne 701 o |
| T10653 | 90-94 | UMLS/C1705212 | denotes | Cell |
| T10879 | 673-681 | UMLS/C0443289 | denotes | ed using |
| T10876 | 780-788 | UMLS/C0936012 | denotes | is, and |
| T10875 | 141-150 | UMLS/C0680240 | denotes | ing to th |
| T10871 | 158-172 | UMLS/C0947322 | denotes | cturer's instr |
| T10868 | 837-842 | UMLS/C0439175 | denotes | amoun |
| T10867 | 390-395 | UMLS/C1367307 | denotes | antib |
| T10866 | 44-49 | UMLS/C1367307 | denotes | was d |
| T10863 | 660-663 | UMLS/C0487992 | denotes | nd |
| T10862 | 492-495 | UMLS/C0487992 | denotes | nti |
| T10858 | 313-318 | UP/P42224 | denotes | antib |
| T10857 | 34-39 | UP/P42224 | denotes | and S |
| T10856 | 692-709 | UMLS/C0162524 | denotes | uminescence syste |
| T10855 | 726-731 | UMLS/C0439645 | denotes | were |
| T10854 | 626-632 | UMLS/C0036082 | denotes | with |
| T10853 | 458-464 | UMLS/C0036082 | denotes | with |
| T10851 | 158-172 | UMLS/C1548599 | denotes | cturer's instr |
| T10850 | 90-94 | UMLS/C1690540 | denotes | Cell |
| T10849 | 6-30 | UMLS/C1519726 | denotes | ne phosphorylation of ST |
| T10846 | 96-110 | UMLS/C0037083 | denotes | ignaling Techn |
| T10845 | 710-716 | UMLS/C1553451 | denotes | . Prot |
| T10844 | 90-94 | UMLS/C1553450 | denotes | Cell |
| T10842 | 213-222 | UMLS/C1439852 | denotes | ted with |
| T10841 | 710-716 | UMLS/C0449913 | denotes | . Prot |
| T10839 | 390-395 | UMLS/C0253050 | denotes | antib |
| T10838 | 44-49 | UMLS/C0253050 | denotes | was d |
| T10837 | 506-513 | UMLS/C1689898 | denotes | g was d |
| T10835 | 173-185 | UMLS/C0302828 | denotes | ctions. Brie |
| T10833 | 710-716 | UMLS/C1704459 | denotes | . Prot |
| T10832 | 580-588 | UMLS/C1621287 | denotes | dy dilut |
| T10831 | 497-505 | UMLS/C1621287 | denotes | dy bindi |
| T10830 | 396-404 | UMLS/C1621287 | denotes | dy, dilu |
| T10829 | 340-348 | UMLS/C1621287 | denotes | dy, and |
| T10828 | 319-327 | UMLS/C1621287 | denotes | dy, anti |
| T10827 | 267-275 | UMLS/C1621287 | denotes | dy, anti |
| T10826 | 232-242 | UMLS/C1621287 | denotes | dies (rabb |
| T10825 | 576-579 | UMLS/C0202087 | denotes | tib |
| T10824 | 251-254 | UMLS/C0202087 | denotes | nti |
| T10816 | 819-827 | UMLS/C1707455 | denotes | ed with |
| T10814 | 726-731 | UMLS/C0185014 | denotes | were |
| T10809 | 794-798 | UMLS/C1548425 | denotes | hosp |
| T10807 | 780-788 | UMLS/C0002778 | denotes | is, and |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11404 | 931-947 | NN | denotes | phosophorylation |
| T11403 | 925-930 | NN | denotes | STAT1 |
| T11402 | 921-924 | IN | denotes | for |
| T11401 | 913-920 | NN | denotes | control |
| T11400 | 904-912 | JJ | denotes | positive |
| T11399 | 902-903 | DT | denotes | a |
| T11398 | 899-901 | IN | denotes | as |
| T11397 | 894-898 | VB | denotes | used |
| T11396 | 889-893 | VB | denotes | were |
| T11395 | 883-888 | NN | denotes | cells |
| T11394 | 878-882 | NN | denotes | Hela |
| T11393 | 861-877 | JJ | denotes | IFN-γ-stimulated |
| T11392 | 852-859 | NN | denotes | protein |
| T11391 | 847-851 | NN | denotes | STAT |
| T11390 | 844-846 | IN | denotes | of |
| T11389 | 837-843 | NN | denotes | amount |
| T11315 | 368-376 | NN | denotes | tyrosine |
| T11314 | 348-367 | JJ | denotes | anti-phosphorylated |
| T11313 | 344-347 | CC | denotes | and |
| T11312 | 342-343 | -COMMA- | denotes | , |
| T11311 | 334-342 | NN | denotes | antibody |
| T11310 | 323-333 | JJ | denotes | anti-STAT3 |
| T11309 | 321-322 | -COMMA- | denotes | , |
| T11308 | 313-321 | NN | denotes | antibody |
| T11307 | 307-312 | NN | denotes | STAT1 |
| T11306 | 304-306 | IN | denotes | of |
| T11305 | 300-303 | CD | denotes | 701 |
| T11304 | 291-299 | NN | denotes | tyrosine |
| T11303 | 271-290 | JJ | denotes | anti-phosphorylated |
| T11302 | 269-270 | -COMMA- | denotes | , |
| T11301 | 261-269 | NN | denotes | antibody |
| T11300 | 250-260 | JJ | denotes | anti-STAT1 |
| T11299 | 248-249 | -RRB- | denotes | ) |
| T11298 | 245-248 | NN | denotes | IgG |
| T11297 | 238-244 | NN | denotes | rabbit |
| T11296 | 237-238 | -LRB- | denotes | ( |
| T11295 | 226-236 | NN | denotes | antibodies |
| T11294 | 222-225 | DT | denotes | the |
| T11293 | 217-221 | IN | denotes | with |
| T11292 | 207-216 | VB | denotes | incubated |
| T11291 | 203-206 | VB | denotes | was |
| T11290 | 194-202 | NN | denotes | membrane |
| T11289 | 190-193 | DT | denotes | the |
| T11288 | 188-189 | -COMMA- | denotes | , |
| T11287 | 181-188 | NNP | denotes | Briefly |
| T11286 | 167-179 | NN | denotes | instructions |
| T11285 | 164-166 | POS | denotes | 's |
| T11284 | 152-164 | NN | denotes | manufacturer |
| T11283 | 148-151 | DT | denotes | the |
| T11282 | 145-147 | TO | denotes | to |
| T11281 | 135-144 | VB | denotes | according |
| T11280 | 133-134 | -RRB- | denotes | ) |
| T11279 | 130-133 | NNP | denotes | USA |
| T11278 | 128-129 | -COMMA- | denotes | , |
| T11277 | 126-128 | NNP | denotes | MA |
| T11276 | 124-125 | -COMMA- | denotes | , |
| T11275 | 117-124 | NNP | denotes | Beverly |
| T11274 | 115-116 | -COMMA- | denotes | , |
| T11273 | 105-115 | NNP | denotes | Technology |
| T11272 | 95-104 | NNP | denotes | Signaling |
| T11271 | 90-94 | NNP | denotes | Cell |
| T11270 | 89-90 | -LRB- | denotes | ( |
| T11269 | 84-88 | NN | denotes | kits |
| T11268 | 74-83 | JJ | denotes | available |
| T11267 | 63-73 | JJ | denotes | commercial |
| T11266 | 57-62 | VB | denotes | using |
| T11265 | 48-56 | VB | denotes | detected |
| T11264 | 44-47 | VB | denotes | was |
| T11263 | 38-43 | NN | denotes | STAT3 |
| T11262 | 34-37 | CC | denotes | and |
| T11261 | 28-33 | NN | denotes | STAT1 |
| T11260 | 25-27 | IN | denotes | of |
| T11259 | 9-24 | NN | denotes | phosphorylation |
| T11258 | 0-8 | NN | denotes | Tyrosine |
| T11388 | 831-836 | JJ | denotes | total |
| T11387 | 827-830 | DT | denotes | the |
| T11386 | 822-826 | IN | denotes | with |
| T11385 | 813-821 | VB | denotes | compared |
| T11384 | 809-812 | VB | denotes | was |
| T11383 | 793-808 | NN | denotes | phosphorylation |
| T11382 | 788-792 | NN | denotes | STAT |
| T11381 | 784-787 | CC | denotes | and |
| T11380 | 782-783 | -COMMA- | denotes | , |
| T11379 | 774-782 | NN | denotes | analysis |
| T11378 | 764-773 | NN | denotes | NIH-Image |
| T11377 | 758-763 | VB | denotes | using |
| T11376 | 745-757 | NN | denotes | densitometry |
| T11375 | 742-744 | IN | denotes | by |
| T11374 | 731-741 | VB | denotes | quantified |
| T11373 | 726-730 | VB | denotes | were |
| T11372 | 720-725 | NN | denotes | bands |
| T11371 | 712-719 | NN | denotes | Protein |
| T11370 | 704-710 | NN | denotes | system |
| T11369 | 686-703 | NN | denotes | chemiluminescence |
| T11368 | 682-685 | DT | denotes | the |
| T11367 | 676-681 | VB | denotes | using |
| T11366 | 667-675 | VB | denotes | revealed |
| T11365 | 663-666 | VB | denotes | was |
| T11364 | 659-662 | CC | denotes | and |
| T11363 | 657-658 | -COMMA- | denotes | , |
| T11362 | 654-657 | NN | denotes | BSA |
| T11361 | 652-653 | NN | denotes | % |
| T11360 | 651-652 | CD | denotes | 5 |
| T11359 | 646-650 | IN | denotes | with |
| T11358 | 643-645 | CD | denotes | 20 |
| T11357 | 637-642 | CD | denotes | Tween |
| T11356 | 635-636 | NN | denotes | % |
| T11355 | 632-635 | CD | denotes | 0.1 |
| T11354 | 627-631 | IN | denotes | with |
| T11353 | 620-626 | NN | denotes | saline |
| T11352 | 606-619 | JJ | denotes | Tris-buffered |
| T11351 | 601-605 | IN | denotes | with |
| T11350 | 594-600 | CD | denotes | 1/4000 |
| T11349 | 591-593 | IN | denotes | at |
| T11348 | 583-590 | VB | denotes | diluted |
| T11347 | 574-582 | NN | denotes | antibody |
| T11346 | 570-573 | NN | denotes | IgG |
| T11345 | 558-569 | JJ | denotes | anti-rabbit |
| T11344 | 536-557 | JJ | denotes | peroxidase-conjugated |
| T11343 | 524-535 | JJ | denotes | horseradish |
| T11342 | 521-523 | IN | denotes | by |
| T11341 | 512-520 | VB | denotes | detected |
| T11340 | 508-511 | VB | denotes | was |
| T11339 | 500-507 | NN | denotes | binding |
| T11338 | 491-499 | NN | denotes | Antibody |
| T11337 | 486-489 | NN | denotes | BSA |
| T11336 | 484-485 | NN | denotes | % |
| T11335 | 483-484 | CD | denotes | 5 |
| T11334 | 478-482 | IN | denotes | with |
| T11333 | 475-477 | CD | denotes | 20 |
| T11332 | 469-474 | CD | denotes | Tween |
| T11331 | 467-468 | NN | denotes | % |
| T11330 | 464-467 | CD | denotes | 0.1 |
| T11329 | 459-463 | IN | denotes | with |
| T11328 | 452-458 | NN | denotes | saline |
| T11327 | 438-451 | JJ | denotes | Tris-buffered |
| T11326 | 433-437 | IN | denotes | with |
| T11325 | 426-432 | CD | denotes | 1/2000 |
| T11324 | 423-425 | IN | denotes | at |
| T11323 | 411-422 | VB | denotes | recommended |
| T11322 | 408-410 | IN | denotes | as |
| T11321 | 400-407 | VB | denotes | diluted |
| T11320 | 398-399 | -COMMA- | denotes | , |
| T11319 | 390-398 | NN | denotes | antibody |
| T11318 | 384-389 | NN | denotes | STAT3 |
| T11317 | 381-383 | IN | denotes | of |
| T11316 | 377-380 | CD | denotes | 705 |
| R5678 | T11259 | T11258 | arg1Of | phosphorylation,Tyrosine |
| R5679 | T11259 | T11260 | arg1Of | phosphorylation,of |
| R5680 | T11259 | T11264 | arg1Of | phosphorylation,was |
| R5681 | T11259 | T11265 | arg2Of | phosphorylation,detected |
| R5682 | T11259 | T11266 | arg1Of | phosphorylation,using |
| R5683 | T11261 | T11262 | arg1Of | STAT1,and |
| R5684 | T11262 | T11260 | arg2Of | and,of |
| R5685 | T11263 | T11262 | arg2Of | STAT3,and |
| R5686 | T11265 | T11264 | arg2Of | detected,was |
| R5687 | T11266 | T11265 | arg3Of | using,detected |
| R5688 | T11266 | T11281 | arg1Of | using,according |
| R5689 | T11269 | T11266 | arg2Of | kits,using |
| R5690 | T11269 | T11267 | arg1Of | kits,commercial |
| R5691 | T11269 | T11268 | arg1Of | kits,available |
| R5692 | T11269 | T11270 | arg1Of | kits,( |
| R5693 | T11273 | T11270 | arg2Of | Technology,( |
| R5694 | T11273 | T11271 | arg1Of | Technology,Cell |
| R5695 | T11273 | T11272 | arg1Of | Technology,Signaling |
| R5696 | T11273 | T11274 | arg1Of | Technology,"," |
| R5697 | T11273 | T11278 | arg1Of | Technology,"," |
| R5698 | T11273 | T11279 | arg1Of | Technology,USA |
| R5699 | T11275 | T11276 | arg1Of | Beverly,"," |
| R5700 | T11276 | T11274 | arg2Of | ",","," |
| R5701 | T11277 | T11276 | arg2Of | MA,"," |
| R5702 | T11280 | T11270 | arg3Of | ),( |
| R5703 | T11282 | T11281 | arg2Of | to,according |
| R5704 | T11284 | T11283 | arg1Of | manufacturer,the |
| R5705 | T11284 | T11285 | arg2Of | manufacturer,'s |
| R5706 | T11286 | T11282 | arg2Of | instructions,to |
| R5707 | T11286 | T11285 | arg1Of | instructions,'s |
| R5708 | T11290 | T11289 | arg1Of | membrane,the |
| R5709 | T11290 | T11291 | arg1Of | membrane,was |
| R5710 | T11290 | T11292 | arg2Of | membrane,incubated |
| R5711 | T11292 | T11287 | arg1Of | incubated,Briefly |
| R5712 | T11292 | T11288 | arg1Of | incubated,"," |
| R5713 | T11292 | T11291 | arg2Of | incubated,was |
| R5714 | T11292 | T11293 | arg1Of | incubated,with |
| R5715 | T11295 | T11296 | arg1Of | antibodies,( |
| R5716 | T11298 | T11296 | arg2Of | IgG,( |
| R5717 | T11298 | T11297 | arg1Of | IgG,rabbit |
| R5718 | T11299 | T11296 | arg3Of | ),( |
| R5719 | T11301 | T11293 | arg2Of | antibody,with |
| R5720 | T11301 | T11294 | arg1Of | antibody,the |
| R5721 | T11301 | T11295 | arg1Of | antibody,antibodies |
| R5722 | T11301 | T11300 | arg1Of | antibody,anti-STAT1 |
| R5723 | T11301 | T11302 | arg1Of | antibody,"," |
| R5724 | T11304 | T11302 | arg2Of | tyrosine,"," |
| R5725 | T11304 | T11303 | arg1Of | tyrosine,anti-phosphorylated |
| R5726 | T11304 | T11305 | arg1Of | tyrosine,701 |
| R5727 | T11304 | T11306 | arg1Of | tyrosine,of |
| R5728 | T11304 | T11320 | arg1Of | tyrosine,"," |
| R5729 | T11304 | T11321 | arg2Of | tyrosine,diluted |
| R5730 | T11308 | T11307 | arg1Of | antibody,STAT1 |
| R5731 | T11308 | T11309 | arg1Of | antibody,"," |
| R5732 | T11309 | T11313 | arg1Of | ",",and |
| R5733 | T11311 | T11309 | arg2Of | antibody,"," |
| R5734 | T11311 | T11310 | arg1Of | antibody,anti-STAT3 |
| R5735 | T11313 | T11306 | arg2Of | and,of |
| R5736 | T11313 | T11312 | arg1Of | and,"," |
| R5737 | T11313 | T11317 | arg1Of | and,of |
| R5738 | T11315 | T11313 | arg2Of | tyrosine,and |
| R5739 | T11315 | T11314 | arg1Of | tyrosine,anti-phosphorylated |
| R5740 | T11315 | T11316 | arg1Of | tyrosine,705 |
| R5741 | T11319 | T11317 | arg2Of | antibody,of |
| R5742 | T11319 | T11318 | arg1Of | antibody,STAT3 |
| R5743 | T11321 | T11322 | arg1Of | diluted,as |
| R5744 | T11323 | T11322 | arg2Of | recommended,as |
| R5745 | T11323 | T11324 | arg1Of | recommended,at |
| R5746 | T11325 | T11324 | arg2Of | 1/2000,at |
| R5747 | T11325 | T11326 | arg1Of | 1/2000,with |
| R5748 | T11328 | T11326 | arg2Of | saline,with |
| R5749 | T11328 | T11327 | arg1Of | saline,Tris-buffered |
| R5750 | T11328 | T11329 | arg1Of | saline,with |
| R5751 | T11328 | T11334 | arg1Of | saline,with |
| R5752 | T11331 | T11330 | arg1Of | %,0.1 |
| R5753 | T11333 | T11329 | arg2Of | 20,with |
| R5754 | T11333 | T11331 | arg1Of | 20,% |
| R5755 | T11333 | T11332 | arg1Of | 20,Tween |
| R5756 | T11335 | T11336 | arg1Of | 5,% |
| R5757 | T11337 | T11334 | arg2Of | BSA,with |
| R5758 | T11337 | T11335 | arg1Of | BSA,5 |
| R5759 | T11339 | T11338 | arg1Of | binding,Antibody |
| R5760 | T11339 | T11340 | arg1Of | binding,was |
| R5761 | T11339 | T11341 | arg2Of | binding,detected |
| R5762 | T11339 | T11365 | arg1Of | binding,was |
| R5763 | T11339 | T11366 | arg2Of | binding,revealed |
| R5764 | T11341 | T11340 | arg2Of | detected,was |
| R5765 | T11341 | T11364 | arg1Of | detected,and |
| R5766 | T11347 | T11341 | arg1Of | antibody,detected |
| R5767 | T11347 | T11342 | arg2Of | antibody,by |
| R5768 | T11347 | T11343 | arg1Of | antibody,horseradish |
| R5769 | T11347 | T11344 | arg1Of | antibody,peroxidase-conjugated |
| R5770 | T11347 | T11345 | arg1Of | antibody,anti-rabbit |
| R5771 | T11347 | T11346 | arg1Of | antibody,IgG |
| R5772 | T11347 | T11348 | arg2Of | antibody,diluted |
| R5773 | T11348 | T11349 | arg1Of | diluted,at |
| R5774 | T11350 | T11349 | arg2Of | 1/4000,at |
| R5775 | T11350 | T11351 | arg1Of | 1/4000,with |
| R5776 | T11353 | T11351 | arg2Of | saline,with |
| R5777 | T11353 | T11352 | arg1Of | saline,Tris-buffered |
| R5778 | T11353 | T11354 | arg1Of | saline,with |
| R5779 | T11356 | T11355 | arg1Of | %,0.1 |
| R5780 | T11358 | T11359 | arg1Of | 20,with |
| R5781 | T11361 | T11359 | arg2Of | %,with |
| R5782 | T11361 | T11360 | arg1Of | %,5 |
| R5783 | T11362 | T11354 | arg2Of | BSA,with |
| R5784 | T11362 | T11356 | arg1Of | BSA,% |
| R5785 | T11362 | T11357 | arg1Of | BSA,Tween |
| R5786 | T11362 | T11358 | arg1Of | BSA,20 |
| R5787 | T11364 | T11363 | arg1Of | and,"," |
| R5788 | T11366 | T11364 | arg2Of | revealed,and |
| R5789 | T11366 | T11365 | arg2Of | revealed,was |
| R5790 | T11366 | T11367 | modOf | revealed,using |
| R5791 | T11370 | T11367 | arg2Of | system,using |
| R5792 | T11370 | T11368 | arg1Of | system,the |
| R5793 | T11370 | T11369 | arg1Of | system,chemiluminescence |
| R5794 | T11372 | T11371 | arg1Of | bands,Protein |
| R5795 | T11372 | T11373 | arg1Of | bands,were |
| R5796 | T11372 | T11374 | arg2Of | bands,quantified |
| R5797 | T11374 | T11373 | arg2Of | quantified,were |
| R5798 | T11374 | T11377 | modOf | quantified,using |
| R5799 | T11374 | T11381 | arg1Of | quantified,and |
| R5800 | T11376 | T11374 | arg1Of | densitometry,quantified |
| R5801 | T11376 | T11375 | arg2Of | densitometry,by |
| R5802 | T11379 | T11377 | arg2Of | analysis,using |
| R5803 | T11379 | T11378 | arg1Of | analysis,NIH-Image |
| R5804 | T11381 | T11380 | arg1Of | and,"," |
| R5805 | T11383 | T11382 | arg1Of | phosphorylation,STAT |
| R5806 | T11383 | T11384 | arg1Of | phosphorylation,was |
| R5807 | T11383 | T11385 | arg2Of | phosphorylation,compared |
| R5808 | T11385 | T11381 | arg2Of | compared,and |
| R5809 | T11385 | T11384 | arg2Of | compared,was |
| R5810 | T11385 | T11386 | arg1Of | compared,with |
| R5811 | T11389 | T11386 | arg2Of | amount,with |
| R5812 | T11389 | T11387 | arg1Of | amount,the |
| R5813 | T11389 | T11388 | arg1Of | amount,total |
| R5814 | T11389 | T11390 | arg1Of | amount,of |
| R5815 | T11392 | T11390 | arg2Of | protein,of |
| R5816 | T11392 | T11391 | arg1Of | protein,STAT |
| R5817 | T11395 | T11393 | arg1Of | cells,IFN-γ-stimulated |
| R5818 | T11395 | T11394 | arg1Of | cells,Hela |
| R5819 | T11395 | T11396 | arg1Of | cells,were |
| R5820 | T11395 | T11397 | arg2Of | cells,used |
| R5821 | T11397 | T11396 | arg2Of | used,were |
| R5822 | T11397 | T11398 | arg1Of | used,as |
| R5823 | T11401 | T11398 | arg2Of | control,as |
| R5824 | T11401 | T11399 | arg1Of | control,a |
| R5825 | T11401 | T11400 | arg1Of | control,positive |
| R5826 | T11401 | T11402 | arg1Of | control,for |
| R5827 | T11404 | T11402 | arg2Of | phosophorylation,for |
| R5828 | T11404 | T11403 | arg1Of | phosophorylation,STAT1 |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10978 | 925-930 | Protein | denotes | STAT1 |
| T10977 | 861-866 | Protein | denotes | IFN-γ |
| T10976 | 788-792 | Protein | denotes | STAT |
| T10975 | 384-389 | Protein | denotes | STAT3 |
| T10974 | 328-333 | Protein | denotes | STAT3 |
| T10973 | 307-312 | Protein | denotes | STAT1 |
| T10972 | 255-260 | Protein | denotes | STAT1 |
| T10971 | 38-43 | Protein | denotes | STAT3 |
| T10970 | 28-33 | Protein | denotes | STAT1 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11067 | 861-866 | http://www.uniprot.org/uniprot/P01579 | denotes | IFN-γ |
| T11066 | 384-389 | http://www.uniprot.org/uniprot/P40763 | denotes | STAT3 |
| T11065 | 328-333 | http://www.uniprot.org/uniprot/P40763 | denotes | STAT3 |
| T11064 | 38-43 | http://www.uniprot.org/uniprot/P40763 | denotes | STAT3 |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10939 | 793-808 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
| T10938 | 9-24 | http://purl.obolibrary.org/obo/GO_0016310 | denotes | phosphorylation |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11010 | 570-582 | http://purl.obolibrary.org/obo/GO_0071736 | denotes | IgG antibody |
| T11009 | 194-202 | http://purl.obolibrary.org/obo/GO_0016020 | denotes | membrane |
| T11006 | 574-582 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibody |
| T11005 | 390-398 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibody |
| T11004 | 334-342 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibody |
| T11003 | 313-321 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibody |
| T11002 | 261-269 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibody |
| T11000 | 574-582 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibody |
| T10999 | 390-398 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibody |
| T10998 | 334-342 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibody |
| T10997 | 313-321 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibody |
| T10996 | 261-269 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibody |
| T10994 | 883-888 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10989 | 500-507 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
| T10988 | 574-582 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
| T10987 | 390-398 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
| T10986 | 334-342 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
| T10985 | 313-321 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
| T10984 | 261-269 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibody |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10936 | 861-948 | Sentence | denotes | IFN-γ-stimulated Hela cells were used as a positive control for STAT1 phosophorylation. |
| T10935 | 712-860 | Sentence | denotes | Protein bands were quantified by densitometry using NIH-Image analysis, and STAT phosphorylation was compared with the total amount of STAT protein. |
| T10934 | 491-711 | Sentence | denotes | Antibody binding was detected by horseradish peroxidase-conjugated anti-rabbit IgG antibody diluted at 1/4000 with Tris-buffered saline with 0.1% Tween 20 with 5% BSA, and was revealed using the chemiluminescence system. |
| T10933 | 181-490 | Sentence | denotes | Briefly, the membrane was incubated with the antibodies (rabbit IgG) anti-STAT1 antibody, anti-phosphorylated tyrosine 701 of STAT1 antibody, anti-STAT3 antibody, and anti-phosphorylated tyrosine 705 of STAT3 antibody, diluted as recommended at 1/2000 with Tris-buffered saline with 0.1% Tween 20 with 5% BSA. |
| T10932 | 0-180 | Sentence | denotes | Tyrosine phosphorylation of STAT1 and STAT3 was detected using commercial available kits (Cell Signaling Technology, Beverly, MA, USA) according to the manufacturer's instructions. |
| T82 | 0-180 | Sentence | denotes | Tyrosine phosphorylation of STAT1 and STAT3 was detected using commercial available kits (Cell Signaling Technology, Beverly, MA, USA) according to the manufacturer's instructions. |
| T83 | 181-490 | Sentence | denotes | Briefly, the membrane was incubated with the antibodies (rabbit IgG) anti-STAT1 antibody, anti-phosphorylated tyrosine 701 of STAT1 antibody, anti-STAT3 antibody, and anti-phosphorylated tyrosine 705 of STAT3 antibody, diluted as recommended at 1/2000 with Tris-buffered saline with 0.1% Tween 20 with 5% BSA. |
| T84 | 491-711 | Sentence | denotes | Antibody binding was detected by horseradish peroxidase-conjugated anti-rabbit IgG antibody diluted at 1/4000 with Tris-buffered saline with 0.1% Tween 20 with 5% BSA, and was revealed using the chemiluminescence system. |
| T85 | 712-860 | Sentence | denotes | Protein bands were quantified by densitometry using NIH-Image analysis, and STAT phosphorylation was compared with the total amount of STAT protein. |
| T86 | 861-948 | Sentence | denotes | IFN-γ-stimulated Hela cells were used as a positive control for STAT1 phosophorylation. |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11082 | 925-930 | Protein | denotes | STAT1 |
| T11081 | 861-866 | Protein | denotes | IFN-γ |
| T11080 | 788-792 | Protein | denotes | STAT |
| T11079 | 384-389 | Protein | denotes | STAT3 |
| T11078 | 328-333 | Protein | denotes | STAT3 |
| T11077 | 307-312 | Protein | denotes | STAT1 |
| T11076 | 255-260 | Protein | denotes | STAT1 |
| T11075 | 38-43 | Protein | denotes | STAT3 |
| T11074 | 28-33 | Protein | denotes | STAT1 |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11911 | 931-947 | Phosphorylation | denotes | phosophorylation |
| T11910 | 913-920 | Regulation | denotes | control |
| T11909 | 793-808 | Phosphorylation | denotes | phosphorylation |
| T11908 | 9-24 | Phosphorylation | denotes | phosphorylation |
| T11907 | 925-930 | Protein | denotes | STAT1 |
| T11906 | 861-866 | Protein | denotes | IFN-γ |
| T11905 | 788-792 | Protein | denotes | STAT |
| T11904 | 255-260 | Protein | denotes | STAT1 |
| T11903 | 384-389 | Protein | denotes | STAT3 |
| T11902 | 328-333 | Protein | denotes | STAT3 |
| T11901 | 307-312 | Protein | denotes | STAT1 |
| T11900 | 38-43 | Protein | denotes | STAT3 |
| T11899 | 28-33 | Protein | denotes | STAT1 |
| R6204 | T11899 | T11908 | themeOf | STAT1,phosphorylation |
| R6205 | T11900 | T11908 | themeOf | STAT3,phosphorylation |
| R6206 | T11905 | T11909 | themeOf | STAT,phosphorylation |
| R6207 | T11907 | T11910 | themeOf | STAT1,control |
| R6208 | T11907 | T11911 | themeOf | STAT1,phosophorylation |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11419 | 925-930 | Protein | denotes | STAT1 |
| T11422 | 931-947 | Phosphorylation | denotes | phosophorylation |
| T11421 | 793-808 | Phosphorylation | denotes | phosphorylation |
| T11420 | 9-24 | Phosphorylation | denotes | phosphorylation |
| T11418 | 861-866 | Protein | denotes | IFN-γ |
| T11417 | 788-792 | Protein | denotes | STAT |
| T11416 | 255-260 | Protein | denotes | STAT1 |
| T11415 | 384-389 | Protein | denotes | STAT3 |
| T11414 | 328-333 | Protein | denotes | STAT3 |
| T11413 | 307-312 | Protein | denotes | STAT1 |
| T11412 | 38-43 | Protein | denotes | STAT3 |
| T11411 | 28-33 | Protein | denotes | STAT1 |
| R5829 | T11411 | T11420 | themeOf | STAT1,phosphorylation |
| R5830 | T11412 | T11420 | themeOf | STAT3,phosphorylation |
| R5831 | T11417 | T11421 | themeOf | STAT,phosphorylation |
| R5832 | T11419 | T11422 | themeOf | STAT1,phosophorylation |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11777 | 931-947 | Phosphorylation | denotes | phosophorylation |
| T11776 | 793-808 | Phosphorylation | denotes | phosphorylation |
| T11775 | 271-290 | Phosphorylation | denotes | anti-phosphorylated |
| T11774 | 9-24 | Phosphorylation | denotes | phosphorylation |
| T11773 | 925-930 | Protein | denotes | STAT1 |
| T11772 | 861-866 | Protein | denotes | IFN-γ |
| T11771 | 788-792 | Protein | denotes | STAT |
| T11770 | 255-260 | Protein | denotes | STAT1 |
| T11769 | 384-389 | Protein | denotes | STAT3 |
| T11768 | 328-333 | Protein | denotes | STAT3 |
| T11767 | 307-312 | Protein | denotes | STAT1 |
| T11766 | 38-43 | Protein | denotes | STAT3 |
| T11765 | 28-33 | Protein | denotes | STAT1 |
| R6169 | T11765 | T11774 | themeOf | STAT1,phosphorylation |
| R6170 | T11766 | T11774 | themeOf | STAT3,phosphorylation |
| R6171 | T11767 | T11775 | themeOf | STAT1,anti-phosphorylated |
| R6172 | T11771 | T11776 | themeOf | STAT,phosphorylation |
| R6173 | T11773 | T11777 | themeOf | STAT1,phosophorylation |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11860 | 438-489 | Entity | denotes | Tris-buffered saline with 0.1% Tween 20 with 5% BSA |
| T11859 | 861-866 | Protein | denotes | IFN-γ |
| T11858 | 348-399 | Entity | denotes | anti-phosphorylated tyrosine 705 of STAT3 antibody, |
| T11857 | 323-342 | Protein | denotes | anti-STAT3 antibody |
| T11856 | 271-399 | Entity | denotes | anti-phosphorylated tyrosine 701 of STAT1 antibody, anti-STAT3 antibody, and anti-phosphorylated tyrosine 705 of STAT3 antibody, |
| T11854 | 438-451 | Entity | denotes | Tris-buffered |
| T11852 | 222-249 | Entity | denotes | the antibodies (rabbit IgG) |
| T11851 | 464-489 | Entity | denotes | 0.1% Tween 20 with 5% BSA |
| T11850 | 384-399 | Protein | denotes | STAT3 antibody, |
| T11849 | 250-270 | Entity | denotes | anti-STAT1 antibody, |
| T11845 | 788-792 | Protein | denotes | STAT |
| T11842 | 651-658 | Protein | denotes | 5% BSA, |
| T11840 | 867-888 | Entity | denotes | stimulated Hela cells |
| T11835 | 606-636 | Entity | denotes | Tris-buffered saline with 0.1% |
| T11831 | 38-43 | Protein | denotes | STAT3 |
| T11829 | 323-342 | Entity | denotes | anti-STAT3 antibody |
| T11828 | 491-499 | Protein | denotes | Antibody |
| T11892 | 788-859 | Phosphorylation | denotes | STAT phosphorylation was compared with the total amount of STAT protein |
| T11891 | 0-116 | Phosphorylation | denotes | Tyrosine phosphorylation of STAT1 and STAT3 was detected using commercial available kits (Cell Signaling Technology, |
| T11890 | 0-116 | Phosphorylation | denotes | Tyrosine phosphorylation of STAT1 and STAT3 was detected using commercial available kits (Cell Signaling Technology, |
| T11887 | 0-8 | Entity | denotes | Tyrosine |
| T11886 | 250-270 | Protein | denotes | anti-STAT1 antibody, |
| T11885 | 90-94 | Entity | denotes | Cell |
| T11884 | 307-312 | Protein | denotes | STAT1 |
| T11882 | 712-757 | Entity | denotes | Protein bands were quantified by densitometry |
| T11881 | 190-202 | Entity | denotes | the membrane |
| T11874 | 28-33 | Protein | denotes | STAT1 |
| T11872 | 606-619 | Entity | denotes | Tris-buffered |
| T11871 | 925-930 | Protein | denotes | STAT1 |
| T11868 | 524-546 | Protein | denotes | horseradish peroxidase |
| T11867 | 384-389 | Protein | denotes | STAT3 |
| T11865 | 307-321 | Entity | denotes | STAT1 antibody |
| T11864 | 844-859 | Protein | denotes | of STAT protein |
| T11863 | 847-851 | Protein | denotes | STAT |
| T11861 | 483-489 | Protein | denotes | 5% BSA |
| R6194 | T11831 | T11890 | themeOf | STAT3,"Tyrosine phosphorylation of STAT1 and STAT3 was detected using commercial available kits (Cell Signaling Technology," |
| R6196 | T11845 | T11892 | themeOf | STAT,STAT phosphorylation was compared with the total amount of STAT protein |
| R6198 | T11874 | T11891 | themeOf | STAT1,"Tyrosine phosphorylation of STAT1 and STAT3 was detected using commercial available kits (Cell Signaling Technology," |
| R6199 | T11887 | T11874 | partOf | Tyrosine,STAT1 |
| R6200 | T11887 | T11831 | partOf | Tyrosine,STAT3 |
| R6201 | T11887 | T11890 | siteOf | Tyrosine,"Tyrosine phosphorylation of STAT1 and STAT3 was detected using commercial available kits (Cell Signaling Technology," |
| R6202 | T11887 | T11891 | siteOf | Tyrosine,"Tyrosine phosphorylation of STAT1 and STAT3 was detected using commercial available kits (Cell Signaling Technology," |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11758 | 947-948 | . | denotes | . |
| T11757 | 931-947 | NN | denotes | phosophorylation |
| T11756 | 925-930 | CD | denotes | STAT1 |
| T11755 | 921-924 | IN | denotes | for |
| T11754 | 913-920 | NN | denotes | control |
| T11753 | 904-912 | JJ | denotes | positive |
| T11752 | 902-903 | DT | denotes | a |
| T11751 | 899-901 | IN | denotes | as |
| T11750 | 894-898 | VBN | denotes | used |
| T11749 | 889-893 | VBD | denotes | were |
| T11748 | 883-888 | NNS | denotes | cells |
| T11747 | 878-882 | NNP | denotes | Hela |
| T11746 | 861-877 | JJ | denotes | IFN-γ-stimulated |
| T11745 | 859-860 | . | denotes | . |
| T11744 | 852-859 | NN | denotes | protein |
| T11743 | 847-851 | NNP | denotes | STAT |
| T11742 | 844-846 | IN | denotes | of |
| T11741 | 837-843 | NN | denotes | amount |
| T11740 | 831-836 | JJ | denotes | total |
| T11739 | 827-830 | DT | denotes | the |
| T11738 | 822-826 | IN | denotes | with |
| T11737 | 813-821 | VBN | denotes | compared |
| T11736 | 809-812 | VBD | denotes | was |
| T11735 | 793-808 | NN | denotes | phosphorylation |
| T11734 | 788-792 | NNP | denotes | STAT |
| T11733 | 784-787 | CC | denotes | and |
| T11732 | 782-783 | , | denotes | , |
| T11731 | 774-782 | NN | denotes | analysis |
| T11730 | 764-773 | JJ | denotes | NIH-Image |
| T11729 | 758-763 | VBG | denotes | using |
| T11728 | 745-757 | NN | denotes | densitometry |
| T11727 | 742-744 | IN | denotes | by |
| T11726 | 731-741 | VBN | denotes | quantified |
| T11725 | 726-730 | VBD | denotes | were |
| T11724 | 720-725 | NNS | denotes | bands |
| T11723 | 712-719 | NN | denotes | Protein |
| T11722 | 710-711 | . | denotes | . |
| T11721 | 704-710 | NN | denotes | system |
| T11720 | 686-703 | NN | denotes | chemiluminescence |
| T11719 | 682-685 | DT | denotes | the |
| T11718 | 676-681 | VBG | denotes | using |
| T11717 | 667-675 | VBN | denotes | revealed |
| T11716 | 663-666 | VBD | denotes | was |
| T11715 | 659-662 | CC | denotes | and |
| T11714 | 657-658 | , | denotes | , |
| T11713 | 654-657 | NNP | denotes | BSA |
| T11712 | 652-653 | NN | denotes | % |
| T11711 | 651-652 | CD | denotes | 5 |
| T11710 | 646-650 | IN | denotes | with |
| T11709 | 643-645 | CD | denotes | 20 |
| T11708 | 637-642 | CD | denotes | Tween |
| T11707 | 635-636 | NN | denotes | % |
| T11706 | 632-635 | CD | denotes | 0.1 |
| T11705 | 627-631 | IN | denotes | with |
| T11704 | 620-626 | NN | denotes | saline |
| T11703 | 606-619 | JJ | denotes | Tris-buffered |
| T11702 | 601-605 | IN | denotes | with |
| T11701 | 594-600 | CD | denotes | 1/4000 |
| T11700 | 591-593 | IN | denotes | at |
| T11699 | 583-590 | VBN | denotes | diluted |
| T11698 | 574-582 | NN | denotes | antibody |
| T11697 | 570-573 | NNP | denotes | IgG |
| T11696 | 558-569 | JJ | denotes | anti-rabbit |
| T11695 | 536-557 | JJ | denotes | peroxidase-conjugated |
| T11694 | 524-535 | JJ | denotes | horseradish |
| T11693 | 521-523 | IN | denotes | by |
| T11692 | 512-520 | VBN | denotes | detected |
| T11691 | 508-511 | VBD | denotes | was |
| T11690 | 500-507 | JJ | denotes | binding |
| T11689 | 491-499 | NN | denotes | Antibody |
| T11688 | 489-490 | . | denotes | . |
| T11687 | 486-489 | NNP | denotes | BSA |
| T11686 | 484-485 | NN | denotes | % |
| T11685 | 483-484 | CD | denotes | 5 |
| T11684 | 478-482 | IN | denotes | with |
| T11683 | 475-477 | CD | denotes | 20 |
| T11682 | 469-474 | CD | denotes | Tween |
| T11681 | 467-468 | NN | denotes | % |
| T11680 | 464-467 | CD | denotes | 0.1 |
| T11679 | 459-463 | IN | denotes | with |
| T11678 | 452-458 | NN | denotes | saline |
| T11677 | 438-451 | JJ | denotes | Tris-buffered |
| T11676 | 433-437 | IN | denotes | with |
| T11675 | 426-432 | CD | denotes | 1/2000 |
| T11674 | 423-425 | IN | denotes | at |
| T11673 | 411-422 | VBN | denotes | recommended |
| T11672 | 408-410 | IN | denotes | as |
| T11671 | 400-407 | VBN | denotes | diluted |
| T11670 | 398-399 | , | denotes | , |
| T11669 | 390-398 | NN | denotes | antibody |
| T11668 | 384-389 | CD | denotes | STAT3 |
| T11667 | 381-383 | IN | denotes | of |
| T11666 | 377-380 | CD | denotes | 705 |
| T11665 | 368-376 | NN | denotes | tyrosine |
| T11664 | 348-367 | JJ | denotes | anti-phosphorylated |
| T11663 | 344-347 | CC | denotes | and |
| T11662 | 342-343 | , | denotes | , |
| T11661 | 334-342 | NN | denotes | antibody |
| T11660 | 323-333 | JJ | denotes | anti-STAT3 |
| T11659 | 321-322 | , | denotes | , |
| T11658 | 313-321 | NN | denotes | antibody |
| T11657 | 307-312 | CD | denotes | STAT1 |
| T11656 | 304-306 | IN | denotes | of |
| T11655 | 300-303 | CD | denotes | 701 |
| T11654 | 291-299 | NN | denotes | tyrosine |
| T11653 | 271-290 | JJ | denotes | anti-phosphorylated |
| T11652 | 269-270 | , | denotes | , |
| T11651 | 261-269 | NN | denotes | antibody |
| T11650 | 250-260 | JJ | denotes | anti-STAT1 |
| T11649 | 248-249 | -RRB- | denotes | ) |
| T11648 | 245-248 | NNP | denotes | IgG |
| T11647 | 238-244 | NN | denotes | rabbit |
| T11646 | 237-238 | -LRB- | denotes | ( |
| T11645 | 226-236 | NNS | denotes | antibodies |
| T11644 | 222-225 | DT | denotes | the |
| T11643 | 217-221 | IN | denotes | with |
| T11642 | 207-216 | VBN | denotes | incubated |
| T11641 | 203-206 | VBD | denotes | was |
| T11640 | 194-202 | NN | denotes | membrane |
| T11639 | 190-193 | DT | denotes | the |
| T11638 | 188-189 | , | denotes | , |
| T11637 | 181-188 | RB | denotes | Briefly |
| T11636 | 179-180 | . | denotes | . |
| T11635 | 167-179 | NNS | denotes | instructions |
| T11634 | 164-166 | POS | denotes | 's |
| T11633 | 152-164 | NN | denotes | manufacturer |
| T11632 | 148-151 | DT | denotes | the |
| T11631 | 145-147 | TO | denotes | to |
| T11630 | 135-144 | VBG | denotes | according |
| T11629 | 133-134 | -RRB- | denotes | ) |
| T11628 | 130-133 | NNP | denotes | USA |
| T11627 | 128-129 | , | denotes | , |
| T11626 | 126-128 | NNP | denotes | MA |
| T11625 | 124-125 | , | denotes | , |
| T11624 | 117-124 | NNP | denotes | Beverly |
| T11623 | 115-116 | , | denotes | , |
| T11622 | 105-115 | NNP | denotes | Technology |
| T11621 | 95-104 | NNP | denotes | Signaling |
| T11620 | 90-94 | NNP | denotes | Cell |
| T11619 | 89-90 | -LRB- | denotes | ( |
| T11618 | 84-88 | NNS | denotes | kits |
| T11617 | 74-83 | JJ | denotes | available |
| T11616 | 63-73 | JJ | denotes | commercial |
| T11615 | 57-62 | VBG | denotes | using |
| T11614 | 48-56 | VBN | denotes | detected |
| T11613 | 44-47 | VBD | denotes | was |
| T11612 | 38-43 | CD | denotes | STAT3 |
| T11611 | 34-37 | CC | denotes | and |
| T11610 | 28-33 | CD | denotes | STAT1 |
| T11609 | 25-27 | IN | denotes | of |
| T11608 | 9-24 | NN | denotes | phosphorylation |
| T11607 | 0-8 | NNP | denotes | Tyrosine |
| R6017 | T11607 | T11608 | compound | Tyrosine,phosphorylation |
| R6018 | T11608 | T11614 | nsubjpass | phosphorylation,detected |
| R6019 | T11609 | T11608 | prep | of,phosphorylation |
| R6020 | T11610 | T11609 | pobj | STAT1,of |
| R6021 | T11611 | T11610 | cc | and,STAT1 |
| R6022 | T11612 | T11610 | conj | STAT3,STAT1 |
| R6023 | T11613 | T11614 | auxpass | was,detected |
| R6024 | T11614 | T11614 | ROOT | detected,detected |
| R6025 | T11615 | T11614 | advcl | using,detected |
| R6026 | T11616 | T11618 | amod | commercial,kits |
| R6027 | T11617 | T11618 | amod | available,kits |
| R6028 | T11618 | T11615 | dobj | kits,using |
| R6029 | T11619 | T11618 | punct | (,kits |
| R6030 | T11620 | T11622 | compound | Cell,Technology |
| R6031 | T11621 | T11622 | compound | Signaling,Technology |
| R6032 | T11622 | T11618 | appos | Technology,kits |
| R6033 | T11623 | T11622 | punct | ",",Technology |
| R6034 | T11624 | T11622 | conj | Beverly,Technology |
| R6035 | T11625 | T11624 | punct | ",",Beverly |
| R6036 | T11626 | T11624 | conj | MA,Beverly |
| R6037 | T11627 | T11626 | punct | ",",MA |
| R6038 | T11628 | T11626 | appos | USA,MA |
| R6039 | T11629 | T11626 | punct | ),MA |
| R6040 | T11630 | T11614 | prep | according,detected |
| R6041 | T11631 | T11630 | prep | to,according |
| R6042 | T11632 | T11633 | det | the,manufacturer |
| R6043 | T11633 | T11635 | poss | manufacturer,instructions |
| R6044 | T11634 | T11633 | case | 's,manufacturer |
| R6045 | T11635 | T11631 | pobj | instructions,to |
| R6046 | T11636 | T11614 | punct | .,detected |
| R6047 | T11637 | T11641 | advmod | Briefly,was |
| R6048 | T11638 | T11641 | punct | ",",was |
| R6049 | T11639 | T11640 | det | the,membrane |
| R6050 | T11640 | T11641 | nsubj | membrane,was |
| R6051 | T11641 | T11641 | ROOT | was,was |
| R6052 | T11642 | T11641 | attr | incubated,was |
| R6053 | T11643 | T11642 | prep | with,incubated |
| R6054 | T11644 | T11645 | det | the,antibodies |
| R6055 | T11645 | T11643 | pobj | antibodies,with |
| R6056 | T11646 | T11648 | punct | (,IgG |
| R6057 | T11647 | T11648 | compound | rabbit,IgG |
| R6058 | T11648 | T11645 | appos | IgG,antibodies |
| R6059 | T11649 | T11642 | punct | ),incubated |
| R6060 | T11650 | T11651 | amod | anti-STAT1,antibody |
| R6061 | T11651 | T11671 | dep | antibody,diluted |
| R6062 | T11652 | T11654 | punct | ",",tyrosine |
| R6063 | T11653 | T11654 | amod | anti-phosphorylated,tyrosine |
| R6064 | T11654 | T11651 | appos | tyrosine,antibody |
| R6065 | T11655 | T11654 | nummod | 701,tyrosine |
| R6066 | T11656 | T11654 | prep | of,tyrosine |
| R6067 | T11657 | T11658 | nummod | STAT1,antibody |
| R6068 | T11658 | T11656 | pobj | antibody,of |
| R6069 | T11659 | T11658 | punct | ",",antibody |
| R6070 | T11660 | T11661 | amod | anti-STAT3,antibody |
| R6071 | T11661 | T11658 | conj | antibody,antibody |
| R6072 | T11662 | T11661 | punct | ",",antibody |
| R6073 | T11663 | T11661 | cc | and,antibody |
| R6074 | T11664 | T11665 | compound | anti-phosphorylated,tyrosine |
| R6075 | T11665 | T11661 | conj | tyrosine,antibody |
| R6076 | T11666 | T11671 | acl | 705,diluted |
| R6077 | T11667 | T11666 | prep | of,705 |
| R6078 | T11668 | T11669 | nummod | STAT3,antibody |
| R6079 | T11669 | T11667 | pobj | antibody,of |
| R6080 | T11670 | T11671 | punct | ",",diluted |
| R6081 | T11671 | T11641 | conj | diluted,was |
| R6082 | T11672 | T11673 | mark | as,recommended |
| R6083 | T11673 | T11671 | advcl | recommended,diluted |
| R6084 | T11674 | T11673 | prep | at,recommended |
| R6085 | T11675 | T11674 | pobj | 1/2000,at |
| R6086 | T11676 | T11675 | prep | with,1/2000 |
| R6087 | T11677 | T11678 | amod | Tris-buffered,saline |
| R6088 | T11678 | T11676 | pobj | saline,with |
| R6089 | T11679 | T11673 | prep | with,recommended |
| R6090 | T11680 | T11681 | nummod | 0.1,% |
| R6091 | T11681 | T11679 | pobj | %,with |
| R6092 | T11682 | T11683 | nummod | Tween,20 |
| R6093 | T11683 | T11684 | nummod | 20,with |
| R6094 | T11684 | T11679 | conj | with,with |
| R6095 | T11685 | T11686 | nummod | 5,% |
| R6096 | T11686 | T11687 | compound | %,BSA |
| R6097 | T11687 | T11684 | pobj | BSA,with |
| R6098 | T11688 | T11671 | punct | .,diluted |
| R6099 | T11689 | T11690 | compound | Antibody,binding |
| R6100 | T11690 | T11692 | nsubjpass | binding,detected |
| R6101 | T11691 | T11692 | auxpass | was,detected |
| R6102 | T11692 | T11692 | ROOT | detected,detected |
| R6103 | T11693 | T11692 | agent | by,detected |
| R6104 | T11694 | T11698 | amod | horseradish,antibody |
| R6105 | T11695 | T11698 | amod | peroxidase-conjugated,antibody |
| R6106 | T11696 | T11698 | amod | anti-rabbit,antibody |
| R6107 | T11697 | T11698 | compound | IgG,antibody |
| R6108 | T11698 | T11693 | pobj | antibody,by |
| R6109 | T11699 | T11698 | acl | diluted,antibody |
| R6110 | T11700 | T11699 | prep | at,diluted |
| R6111 | T11701 | T11700 | pobj | 1/4000,at |
| R6112 | T11702 | T11701 | prep | with,1/4000 |
| R6113 | T11703 | T11704 | amod | Tris-buffered,saline |
| R6114 | T11704 | T11702 | pobj | saline,with |
| R6115 | T11705 | T11699 | prep | with,diluted |
| R6116 | T11706 | T11707 | nummod | 0.1,% |
| R6117 | T11707 | T11705 | pobj | %,with |
| R6118 | T11708 | T11709 | nummod | Tween,20 |
| R6119 | T11709 | T11707 | prep | 20,% |
| R6120 | T11710 | T11709 | prep | with,20 |
| R6121 | T11711 | T11712 | nummod | 5,% |
| R6122 | T11712 | T11713 | compound | %,BSA |
| R6123 | T11713 | T11710 | pobj | BSA,with |
| R6124 | T11714 | T11707 | punct | ",",% |
| R6125 | T11715 | T11692 | cc | and,detected |
| R6126 | T11716 | T11717 | auxpass | was,revealed |
| R6127 | T11717 | T11692 | conj | revealed,detected |
| R6128 | T11718 | T11717 | advcl | using,revealed |
| R6129 | T11719 | T11721 | det | the,system |
| R6130 | T11720 | T11721 | compound | chemiluminescence,system |
| R6131 | T11721 | T11718 | dobj | system,using |
| R6132 | T11722 | T11692 | punct | .,detected |
| R6133 | T11723 | T11724 | compound | Protein,bands |
| R6134 | T11724 | T11726 | nsubjpass | bands,quantified |
| R6135 | T11725 | T11726 | auxpass | were,quantified |
| R6136 | T11726 | T11726 | ROOT | quantified,quantified |
| R6137 | T11727 | T11726 | agent | by,quantified |
| R6138 | T11728 | T11727 | pobj | densitometry,by |
| R6139 | T11729 | T11726 | advcl | using,quantified |
| R6140 | T11730 | T11731 | amod | NIH-Image,analysis |
| R6141 | T11731 | T11729 | dobj | analysis,using |
| R6142 | T11732 | T11726 | punct | ",",quantified |
| R6143 | T11733 | T11726 | cc | and,quantified |
| R6144 | T11734 | T11735 | compound | STAT,phosphorylation |
| R6145 | T11735 | T11736 | nsubj | phosphorylation,was |
| R6146 | T11736 | T11726 | conj | was,quantified |
| R6147 | T11737 | T11736 | prep | compared,was |
| R6148 | T11738 | T11737 | prep | with,compared |
| R6149 | T11739 | T11741 | det | the,amount |
| R6150 | T11740 | T11741 | amod | total,amount |
| R6151 | T11741 | T11738 | pobj | amount,with |
| R6152 | T11742 | T11741 | prep | of,amount |
| R6153 | T11743 | T11744 | compound | STAT,protein |
| R6154 | T11744 | T11742 | pobj | protein,of |
| R6155 | T11745 | T11736 | punct | .,was |
| R6156 | T11746 | T11748 | amod | IFN-γ-stimulated,cells |
| R6157 | T11747 | T11748 | compound | Hela,cells |
| R6158 | T11748 | T11750 | nsubjpass | cells,used |
| R6159 | T11749 | T11750 | auxpass | were,used |
| R6160 | T11750 | T11750 | ROOT | used,used |
| R6161 | T11751 | T11750 | prep | as,used |
| R6162 | T11752 | T11754 | det | a,control |
| R6163 | T11753 | T11754 | amod | positive,control |
| R6164 | T11754 | T11751 | pobj | control,as |
| R6165 | T11755 | T11754 | prep | for,control |
| R6166 | T11756 | T11757 | nummod | STAT1,phosophorylation |
| R6167 | T11757 | T11755 | pobj | phosophorylation,for |
| R6168 | T11758 | T11750 | punct | .,used |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11057 | 913-920 | Positive_regulation | denotes | control |
| T11056 | 931-947 | Phosphorylation | denotes | phosophorylation |
| T11055 | 925-930 | Protein | denotes | STAT1 |
| T11054 | 861-866 | Protein | denotes | IFN-γ |
| T11053 | 793-808 | Phosphorylation | denotes | phosphorylation |
| T11052 | 793-808 | Phosphorylation | denotes | phosphorylation |
| T11051 | 847-859 | Protein | denotes | STAT protein |
| T11050 | 788-792 | Protein | denotes | STAT |
| T11049 | 500-507 | Binding | denotes | binding |
| T11048 | 524-582 | Protein | denotes | horseradish peroxidase-conjugated anti-rabbit IgG antibody |
| T11047 | 348-398 | Protein | denotes | anti-phosphorylated tyrosine 705 of STAT3 antibody |
| T11046 | 323-342 | Protein | denotes | anti-STAT3 antibody |
| T11045 | 271-321 | Protein | denotes | anti-phosphorylated tyrosine 701 of STAT1 antibody |
| T11044 | 9-24 | Phosphorylation | denotes | phosphorylation |
| T11043 | 9-24 | Phosphorylation | denotes | phosphorylation |
| T11042 | 0-8 | Entity | denotes | Tyrosine |
| T11041 | 38-43 | Protein | denotes | STAT3 |
| T11040 | 28-33 | Protein | denotes | STAT1 |
| R5490 | T11040 | T11043 | themeOf | STAT1,phosphorylation |
| R5491 | T11040 | T11042 | partOf | STAT1,Tyrosine |
| R5492 | T11041 | T11044 | themeOf | STAT3,phosphorylation |
| R5493 | T11041 | T11042 | partOf | STAT3,Tyrosine |
| R5494 | T11042 | T11043 | Site | Tyrosine,phosphorylation |
| R5495 | T11042 | T11044 | Site | Tyrosine,phosphorylation |
| R5496 | T11048 | T11049 | themeOf | horseradish peroxidase-conjugated anti-rabbit IgG antibody,binding |
| R5497 | T11050 | T11052 | themeOf | STAT,phosphorylation |
| R5498 | T11051 | T11053 | themeOf | STAT protein,phosphorylation |
| R5499 | T11055 | T11056 | themeOf | STAT1,phosophorylation |
| R5500 | T11056 | T11057 | themeOf | phosophorylation,control |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10647 | 925-930 | Protein | denotes | STAT1 |
| T10646 | 861-866 | Protein | denotes | IFN-γ |
| T10645 | 793-808 | Phosphorylation | denotes | phosphorylation |
| T10644 | 788-792 | Protein | denotes | STAT |
| T10643 | 500-507 | Binding | denotes | binding |
| T10642 | 384-389 | Protein | denotes | STAT3 |
| T10641 | 328-333 | Protein | denotes | STAT3 |
| T10640 | 307-312 | Protein | denotes | STAT1 |
| T10639 | 255-260 | Protein | denotes | STAT1 |
| T10638 | 38-43 | Protein | denotes | STAT3 |
| T10637 | 28-33 | Protein | denotes | STAT1 |
| T10636 | 9-24 | Phosphorylation | denotes | phosphorylation |
| T10627 | 925-930 | Protein | denotes | STAT1 |
| T10626 | 861-866 | Protein | denotes | IFN-γ |
| T10625 | 788-792 | Protein | denotes | STAT |
| T10624 | 384-389 | Protein | denotes | STAT3 |
| T10623 | 328-333 | Protein | denotes | STAT3 |
| T10622 | 307-312 | Protein | denotes | STAT1 |
| T10621 | 255-260 | Protein | denotes | STAT1 |
| T10620 | 38-43 | Protein | denotes | STAT3 |
| T10619 | 28-33 | Protein | denotes | STAT1 |
| R5470 | T10637 | T10636 | themeOf | STAT1,phosphorylation |
| R5471 | T10638 | T10636 | themeOf | STAT3,phosphorylation |
| R5472 | T10644 | T10645 | themeOf | STAT,phosphorylation |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T10594 | 793-808 | Phosphorylation | denotes | phosphorylation |
| T10593 | 9-24 | Phosphorylation | denotes | phosphorylation |
| T10590 | 925-930 | Protein | denotes | STAT1 |
| T10589 | 861-866 | Protein | denotes | IFN-γ |
| T10588 | 788-792 | Protein | denotes | STAT |
| T10587 | 384-389 | Protein | denotes | STAT3 |
| T10586 | 328-333 | Protein | denotes | STAT3 |
| T10585 | 307-312 | Protein | denotes | STAT1 |
| T10584 | 255-260 | Protein | denotes | STAT1 |
| T10583 | 38-43 | Protein | denotes | STAT3 |
| T10582 | 28-33 | Protein | denotes | STAT1 |
| R5466 | T10582 | T10593 | themeOf | STAT1,phosphorylation |
| R5467 | T10583 | T10593 | themeOf | STAT3,phosphorylation |
| R5468 | T10588 | T10594 | themeOf | STAT,phosphorylation |