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PMC:1064873 / 1272-1664 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T432 101-109 REPORTING denotes indicate
T424 58-68 OCCURRENCE denotes determined
T423 131-137 OCCURRENCE denotes become
T418 2-11 OCCURRENCE denotes signaling
T416 269-279 OCCURRENCE denotes associated
T414 266-268 country_code denotes be
T413 246-248 state denotes IL
T412 232-236 time_modifier denotes this
T411 183-185 state denotes IL
T410 148-150 country_code denotes to
T409 69-71 country_code denotes by
T408 55-57 country_code denotes as
T379 375-383 NN denotes cytokine
T378 372-374 IN denotes of
T377 361-371 NN denotes suppressor
T376 357-360 CC denotes and
T375 346-356 NN denotes activation
T374 344-345 CD denotes 3
T373 330-343 NN denotes transcription
T372 327-329 IN denotes of
T371 317-326 NN denotes activator
T370 313-316 CC denotes and
T369 302-312 NN denotes transducer
T368 295-301 NN denotes signal
T367 285-294 VBN denotes sustained
T366 280-284 IN denotes with
T365 269-279 VBN denotes associated
T364 266-268 VB denotes be
T363 262-265 MD denotes may
T362 252-261 VBG denotes signaling
T361 249-251 CD denotes 10
T360 246-249 NNP denotes IL-
T359 237-245 JJ denotes impaired
T358 232-236 DT denotes this
T357 228-231 CC denotes and
T356 226-227 , denotes ,
T355 220-226 NN denotes tissue
T354 211-219 NN denotes synovial
T353 206-210 IN denotes into
T352 196-205 NN denotes migration
T351 189-195 IN denotes before
T350 186-188 CD denotes 10
T349 183-186 NNP denotes IL-
T348 180-182 IN denotes of
T347 173-179 NN denotes effect
T346 155-172 JJ denotes immunosuppressive
T345 151-154 DT denotes the
T344 148-150 TO denotes to
T343 138-147 JJ denotes resistant
T342 131-137 VBP denotes become
T341 125-130 NNS denotes cells
T340 123-124 NN denotes T
T339 121-122 NN denotes +
T338 120-121 CD denotes 4
T337 118-120 NNP denotes CD
T336 115-117 NNP denotes RA
T335 110-114 IN denotes that
T334 101-109 VBP denotes indicate
T333 93-100 NNS denotes results
T332 87-92 DT denotes These
T331 85-86 . denotes .
T330 82-85 NNP denotes PCR
T329 72-81 JJ denotes real-time
T328 69-71 IN denotes by
T327 58-68 VBN denotes determined
T326 55-57 IN denotes as
T325 53-54 , denotes ,
T324 48-53 NNS denotes cells
T323 46-47 NN denotes T
T322 44-45 NN denotes +
T321 43-44 CD denotes 4
T320 41-43 NNP denotes CD
T319 33-40 NN denotes control
T318 28-32 IN denotes with
T317 19-27 VBN denotes compared
T316 14-18 NN denotes mRNA
T315 12-13 CD denotes 3
T314 2-11 VBG denotes signaling

biosemtest

Id Subject Object Predicate Lexical cue
T881 232-236 UMLS/C0323983 denotes this
T875 33-40 UMLS/C2587213 denotes control
T865 155-179 UMLS/C0021080 denotes immunosuppressive effect
T862 196-205 UMLS/C1533574 denotes migration
T856 262-265 UMLS/C0337876 denotes may
T847 93-100 UMLS/C1546471 denotes results
T835 269-284 UMLS/C0332281 denotes associated with
T831 33-40 UMLS/C0332298 denotes control
T815 93-100 UMLS/C0332294 denotes results
T814 93-100 UMLS/C1274040 denotes results
T813 252-261 UMLS/C1710082 denotes signaling
T789 237-245 UMLS/C0684336 denotes impaired
T708 123-130 UMLS/C0039194 denotes T cells
T707 46-53 UMLS/C0039194 denotes T cells
T687 19-27 UMLS/C1707455 denotes compared
T686 33-40 UMLS/C1550141 denotes control
T683 246-251 UMLS/C1149215 denotes IL-10
T682 183-188 UMLS/C1149215 denotes IL-10
T657 295-345 UP/Q19S50 denotes signal transducer and activator of transcription 3
T649 262-265 UMLS/C0454788 denotes may
T639 196-205 UMLS/C1881827 denotes migration
T637 346-356 UMLS/C1879547 denotes activation
T633 93-100 UMLS/C1280519 denotes results
T626 196-205 UMLS/C0600210 denotes migration
T617 246-251 UMLS/C1522550 denotes IL-10
T616 183-188 UMLS/C1522550 denotes IL-10
T610 246-251 UMLS/C1334098 denotes IL-10
T609 183-188 UMLS/C1334098 denotes IL-10
T597 33-40 UMLS/C0009932 denotes control
T541 58-68 UMLS/C0521095 denotes determined
T530 211-226 UMLS/C1267208 denotes synovial tissue
T521 101-109 UMLS/C1444656 denotes indicate
T518 72-85 UMLS/C1709846 denotes real-time PCR
T511 196-205 UMLS/C0020942 denotes migration
T477 295-345 UP/P52631 denotes signal transducer and activator of transcription 3
T472 295-345 UP/P42227 denotes signal transducer and activator of transcription 3
T466 14-18 UMLS/C0035696 denotes mRNA
T465 295-345 UP/P40763 denotes signal transducer and activator of transcription 3
T452 295-345 UP/Q6DV79 denotes signal transducer and activator of transcription 3
T440 33-40 UMLS/C1882979 denotes control
T438 237-245 UMLS/C0221099 denotes impaired
T781 138-150 UMLS/C0332325 denotes resistant to
T775 285-294 UMLS/C0443318 denotes sustained
T771 33-40 UMLS/C0243148 denotes control
T759 252-261 UMLS/C0037083 denotes signaling
T755 295-345 UP/P61635 denotes signal transducer and activator of transcription 3
T747 33-40 UMLS/C1547100 denotes control
T746 295-345 UMLS/C0253050 denotes signal transducer and activator of transcription 3
T500 246-251 UMLS/C0085295 denotes IL-10
T499 183-188 UMLS/C0085295 denotes IL-10

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1411 375-383 NN denotes cytokine
T1410 372-374 IN denotes of
T1409 361-371 NN denotes suppressor
T1408 357-360 CC denotes and
T1407 346-356 NN denotes activation
T1406 344-345 CD denotes 3
T1405 330-343 NN denotes transcription
T1404 327-329 IN denotes of
T1403 317-326 NN denotes activator
T1402 313-316 CC denotes and
T1401 302-312 NN denotes transducer
T1400 295-301 NN denotes signal
T1399 285-294 JJ denotes sustained
T1398 280-284 IN denotes with
T1397 269-279 VB denotes associated
T1396 266-268 VB denotes be
T1395 262-265 MD denotes may
T1394 252-261 NN denotes signaling
T1393 246-251 NN denotes IL-10
T1392 237-245 JJ denotes impaired
T1391 232-236 DT denotes this
T1390 228-231 CC denotes and
T1389 226-227 -COMMA- denotes ,
T1388 220-226 NN denotes tissue
T1387 211-219 JJ denotes synovial
T1386 206-210 IN denotes into
T1385 196-205 NN denotes migration
T1384 189-195 IN denotes before
T1383 183-188 NN denotes IL-10
T1382 180-182 IN denotes of
T1381 173-179 NN denotes effect
T1380 155-172 JJ denotes immunosuppressive
T1379 151-154 DT denotes the
T1378 148-150 TO denotes to
T1377 138-147 JJ denotes resistant
T1376 131-137 VB denotes become
T1375 125-130 NN denotes cells
T1374 123-124 NN denotes T
T1373 118-122 JJ denotes CD4+
T1372 115-117 NN denotes RA
T1371 110-114 IN denotes that
T1370 101-109 VB denotes indicate
T1369 93-100 NN denotes results
T1368 87-92 DT denotes These
T1367 82-85 NN denotes PCR
T1366 72-81 JJ denotes real-time
T1365 69-71 IN denotes by
T1364 58-68 VB denotes determined
T1363 55-57 IN denotes as
T1362 53-54 -COMMA- denotes ,
T1361 48-53 NN denotes cells
T1360 46-47 NN denotes T
T1359 41-45 JJ denotes CD4+
T1358 33-40 NN denotes control
T1357 28-32 IN denotes with
T1356 19-27 VB denotes compared
T1355 14-18 NN denotes mRNA
T1354 12-13 CD denotes 3
T1353 2-11 NN denotes signaling
R255 T1355 T1353 arg1Of mRNA,signaling
R256 T1355 T1354 arg1Of mRNA,3
R257 T1357 T1356 arg2Of with,compared
R258 T1361 T1357 arg2Of cells,with
R259 T1361 T1358 arg1Of cells,control
R260 T1361 T1359 arg1Of cells,CD4+
R261 T1361 T1360 arg1Of cells,T
R262 T1364 T1363 arg2Of determined,as
R263 T1367 T1364 arg1Of PCR,determined
R264 T1367 T1365 arg2Of PCR,by
R265 T1367 T1366 arg1Of PCR,real-time
R266 T1369 T1368 arg1Of results,These
R267 T1369 T1370 arg1Of results,indicate
R268 T1370 T1390 arg1Of indicate,and
R269 T1375 T1372 arg1Of cells,RA
R270 T1375 T1373 arg1Of cells,CD4+
R271 T1375 T1374 arg1Of cells,T
R272 T1375 T1376 arg1Of cells,become
R273 T1375 T1377 arg1Of cells,resistant
R274 T1376 T1370 arg2Of become,indicate
R275 T1376 T1371 arg1Of become,that
R276 T1377 T1376 arg2Of resistant,become
R277 T1377 T1378 arg1Of resistant,to
R278 T1381 T1378 arg2Of effect,to
R279 T1381 T1379 arg1Of effect,the
R280 T1381 T1380 arg1Of effect,immunosuppressive
R281 T1381 T1382 arg1Of effect,of
R282 T1381 T1384 arg1Of effect,before
R283 T1381 T1386 arg1Of effect,into
R284 T1383 T1382 arg2Of IL-10,of
R285 T1385 T1384 arg2Of migration,before
R286 T1388 T1386 arg2Of tissue,into
R287 T1388 T1387 arg1Of tissue,synovial
R288 T1390 T1389 arg1Of and,","
R289 T1394 T1391 arg1Of signaling,this
R290 T1394 T1392 arg1Of signaling,impaired
R291 T1394 T1393 arg1Of signaling,IL-10
R292 T1394 T1395 arg1Of signaling,may
R293 T1394 T1396 arg1Of signaling,be
R294 T1394 T1397 arg2Of signaling,associated
R295 T1397 T1390 arg2Of associated,and
R296 T1397 T1395 arg2Of associated,may
R297 T1397 T1396 arg2Of associated,be
R298 T1397 T1398 arg1Of associated,with
R299 T1401 T1402 arg1Of transducer,and
R300 T1403 T1402 arg2Of activator,and
R301 T1407 T1399 arg1Of activation,sustained
R302 T1407 T1400 arg1Of activation,signal
R303 T1407 T1401 arg1Of activation,transducer
R304 T1407 T1403 arg1Of activation,activator
R305 T1407 T1404 arg1Of activation,of
R306 T1407 T1405 arg1Of activation,transcription
R307 T1407 T1406 arg1Of activation,3
R308 T1407 T1408 arg1Of activation,and
R309 T1408 T1398 arg2Of and,with
R310 T1409 T1408 arg2Of suppressor,and
R311 T1409 T1410 arg1Of suppressor,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T996 295-345 Protein denotes signal transducer and activator of transcription 3
T992 41-44 Protein denotes CD4
T993 118-121 Protein denotes CD4
T994 183-188 Protein denotes IL-10
T995 246-251 Protein denotes IL-10

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1036 246-251 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1035 183-188 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1088 330-356 http://www.uniprot.org/uniprot/P18847-3 denotes transcription 3 activation
T1047 41-44 http://www.uniprot.org/uniprot/P01730 denotes CD4
T1048 118-121 http://www.uniprot.org/uniprot/P01730 denotes CD4

UBERON-AE

Id Subject Object Predicate Lexical cue
T437 220-226 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue

GO-BP

Id Subject Object Predicate Lexical cue
T912 330-343 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T902 252-261 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling
T901 2-11 http://purl.obolibrary.org/obo/GO_0023052 denotes signaling

GO-CC

Id Subject Object Predicate Lexical cue
T1022 125-130 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T1021 48-53 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T1005 246-251 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10
T1004 183-188 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10

simple1

Id Subject Object Predicate Lexical cue
T1147 41-44 Protein denotes CD4
T1148 118-121 Protein denotes CD4
T1149 183-188 Protein denotes IL-10
T1150 246-251 Protein denotes IL-10
T1151 295-345 Protein denotes signal transducer and activator of transcription 3

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1963 346-356 Positive_regulation denotes activation
T1948 295-345 Protein denotes signal transducer and activator of transcription 3
T1947 246-251 Protein denotes IL-10
T1946 183-188 Protein denotes IL-10
T1945 118-121 Protein denotes CD4
T1944 41-44 Protein denotes CD4
R637 T1948 T1963 themeOf signal transducer and activator of transcription 3,activation

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1459 346-356 Positive_regulation denotes activation
T1444 295-345 Protein denotes signal transducer and activator of transcription 3
T1443 246-251 Protein denotes IL-10
T1442 183-188 Protein denotes IL-10
T1441 118-121 Protein denotes CD4
T1440 41-44 Protein denotes CD4
R326 T1444 T1459 themeOf signal transducer and activator of transcription 3,activation

DLUT931

Id Subject Object Predicate Lexical cue
T1507 346-356 Positive_regulation denotes activation
T1506 237-245 Negative_regulation denotes impaired
T1489 295-345 Protein denotes signal transducer and activator of transcription 3
T1488 246-251 Protein denotes IL-10
T1487 183-188 Protein denotes IL-10
T1486 118-121 Protein denotes CD4
T1485 41-44 Protein denotes CD4
R342 T1488 T1506 themeOf IL-10,impaired
R343 T1489 T1507 themeOf signal transducer and activator of transcription 3,activation

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1909 232-261 Positive_regulation denotes this impaired IL-10 signaling
T1897 295-345 Protein denotes signal transducer and activator of transcription 3
T1888 115-117 Protein denotes RA
T1882 28-53 Entity denotes with control CD4+ T cells
T1878 246-251 Protein denotes IL-10
T1865 69-85 Protein denotes by real-time PCR
T1864 180-188 Protein denotes of IL-10
T1863 115-130 Entity denotes RA CD4+ T cells
T1913 285-356 Positive_regulation denotes sustained signal transducer and activator of transcription 3 activation
T1915 232-261 Negative_regulation denotes this impaired IL-10 signaling
R616 T1878 T1909 causeOf IL-10,this impaired IL-10 signaling
R622 T1897 T1913 themeOf signal transducer and activator of transcription 3,sustained signal transducer and activator of transcription 3 activation
R625 T1909 T1915 themeOf this impaired IL-10 signaling,this impaired IL-10 signaling

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1821 375-383 NN denotes cytokine
T1820 372-374 IN denotes of
T1819 361-371 NN denotes suppressor
T1818 357-360 CC denotes and
T1817 346-356 NN denotes activation
T1816 344-345 CD denotes 3
T1815 330-343 NN denotes transcription
T1814 327-329 IN denotes of
T1813 317-326 NN denotes activator
T1812 313-316 CC denotes and
T1811 302-312 NN denotes transducer
T1810 295-301 NN denotes signal
T1809 285-294 VBN denotes sustained
T1808 280-284 IN denotes with
T1807 269-279 VBN denotes associated
T1806 266-268 VB denotes be
T1805 262-265 MD denotes may
T1804 252-261 VBG denotes signaling
T1803 246-251 NN denotes IL-10
T1802 237-245 VBN denotes impaired
T1801 232-236 DT denotes this
T1800 228-231 CC denotes and
T1799 226-227 , denotes ,
T1798 220-226 NN denotes tissue
T1797 211-219 JJ denotes synovial
T1796 206-210 IN denotes into
T1795 196-205 NN denotes migration
T1794 189-195 IN denotes before
T1793 183-188 NN denotes IL-10
T1792 180-182 IN denotes of
T1791 173-179 NN denotes effect
T1790 155-172 JJ denotes immunosuppressive
T1789 151-154 DT denotes the
T1788 148-150 TO denotes to
T1787 138-147 JJ denotes resistant
T1786 131-137 VBP denotes become
T1785 125-130 NNS denotes cells
T1784 123-124 NNP denotes T
T1783 121-122 VBD denotes +
T1782 118-121 NNP denotes CD4
T1781 115-117 NNP denotes RA
T1780 110-114 IN denotes that
T1779 101-109 VBP denotes indicate
T1778 93-100 NNS denotes results
T1777 87-92 DT denotes These
T1776 85-86 . denotes .
T1775 82-85 NNP denotes PCR
T1774 72-81 JJ denotes real-time
T1773 69-71 IN denotes by
T1772 58-68 VBN denotes determined
T1771 55-57 IN denotes as
T1770 53-54 , denotes ,
T1769 48-53 NNS denotes cells
T1768 46-47 NNP denotes T
T1767 44-45 NNP denotes +
T1766 41-44 NNP denotes CD4
T1765 33-40 NN denotes control
T1764 28-32 IN denotes with
T1763 19-27 VBN denotes compared
T1762 14-18 NNP denotes mRNA
T1761 12-13 CD denotes 3
T1760 2-11 VBG denotes signaling
R534 T1761 T1762 nummod 3,mRNA
R535 T1762 T1760 dobj mRNA,signaling
R536 T1763 T1762 prep compared,mRNA
R537 T1764 T1763 prep with,compared
R538 T1765 T1764 pobj control,with
R539 T1766 T1769 compound CD4,cells
R540 T1767 T1769 compound +,cells
R541 T1768 T1769 compound T,cells
R542 T1769 T1765 dobj cells,control
R544 T1771 T1772 mark as,determined
R546 T1773 T1772 agent by,determined
R547 T1774 T1775 amod real-time,PCR
R548 T1775 T1773 pobj PCR,by
R550 T1777 T1778 det These,results
R551 T1778 T1779 nsubj results,indicate
R552 T1779 T1779 ROOT indicate,indicate
R553 T1780 T1786 mark that,become
R554 T1781 T1782 compound RA,CD4
R555 T1782 T1786 nsubj CD4,become
R556 T1783 T1786 aux +,become
R557 T1784 T1785 compound T,cells
R558 T1785 T1786 nsubj cells,become
R559 T1786 T1779 ccomp become,indicate
R560 T1787 T1786 acomp resistant,become
R561 T1788 T1787 prep to,resistant
R562 T1789 T1791 det the,effect
R563 T1790 T1791 amod immunosuppressive,effect
R564 T1791 T1788 pobj effect,to
R565 T1792 T1791 prep of,effect
R566 T1793 T1792 pobj IL-10,of
R567 T1794 T1786 prep before,become
R568 T1795 T1794 pobj migration,before
R569 T1796 T1795 prep into,migration
R570 T1797 T1798 amod synovial,tissue
R571 T1798 T1796 pobj tissue,into
R572 T1799 T1786 punct ",",become
R573 T1800 T1786 cc and,become
R574 T1801 T1803 det this,IL-10
R575 T1802 T1803 amod impaired,IL-10
R576 T1803 T1807 nsubjpass IL-10,associated
R577 T1804 T1803 acl signaling,IL-10
R578 T1805 T1807 aux may,associated
R579 T1806 T1807 auxpass be,associated
R580 T1807 T1786 conj associated,become
R581 T1808 T1807 prep with,associated
R582 T1809 T1811 amod sustained,transducer
R583 T1810 T1811 compound signal,transducer
R584 T1811 T1808 pobj transducer,with
R585 T1812 T1811 cc and,transducer
R586 T1813 T1811 conj activator,transducer
R587 T1814 T1813 prep of,activator
R588 T1815 T1814 pobj transcription,of
R589 T1816 T1815 nummod 3,transcription
R590 T1817 T1815 conj activation,transcription
R591 T1818 T1817 cc and,activation
R592 T1819 T1817 conj suppressor,activation
R593 T1820 T1815 prep of,transcription
R594 T1821 T1820 pobj cytokine,of

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1119 41-45 Protein denotes CD4+
T1120 118-121 Protein denotes CD4
T1121 246-251 Protein denotes IL-10

testone

Id Subject Object Predicate Lexical cue
T61 295-345 Protein denotes signal transducer and activator of transcription 3
T60 246-251 Protein denotes IL-10
T59 183-188 Protein denotes IL-10
T58 118-121 Protein denotes CD4
T57 41-44 Protein denotes CD4