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PMC:1064873 / 1052-1185 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T421 117-126 OCCURRENCE denotes contained
T407 23-25 state denotes IL
T406 10-12 state denotes IL
T299 127-133 JJR denotes higher
T298 117-126 VBD denotes contained
T297 108-116 NNS denotes patients
T296 105-107 NNP denotes RA
T295 100-104 IN denotes from
T294 94-99 NNS denotes cells
T293 92-93 NN denotes T
T292 90-91 NN denotes +
T291 89-90 CD denotes 4
T290 87-89 NNP denotes CD
T289 81-86 NNP denotes Blood
T288 79-80 . denotes .
T287 69-79 NN denotes production
T286 63-68 NN denotes gamma
T285 52-62 NN denotes interferon
T284 49-51 IN denotes of
T283 38-48 NN denotes inhibition
T282 29-37 JJ denotes mediated
T281 28-29 : denotes -
T280 26-28 CD denotes 10
T279 23-26 NNP denotes IL-
T278 15-22 VBN denotes reduced
T277 13-14 CD denotes 6
T276 10-13 NNP denotes IL-
T275 5-9 IN denotes with

biosemtest

Id Subject Object Predicate Lexical cue
T878 69-79 UMLS/C1548180 denotes production
T874 52-68 UP/P01581 denotes interferon gamma
T870 127-133 UMLS/C1299351 denotes higher
T860 52-68 UP/Q62574 denotes interferon gamma
T855 52-68 UP/Q7TSP4 denotes interferon gamma
T852 52-68 UP/Q8SPW9 denotes interferon gamma
T849 117-126 UMLS/C0332256 denotes contained
T843 52-68 UP/P63311 denotes interferon gamma
T834 52-68 UP/P63309 denotes interferon gamma
T830 108-116 UMLS/C1705908 denotes patients
T825 52-68 UP/P46402 denotes interferon gamma
T822 117-126 UMLS/C2700400 denotes contained
T819 127-133 UMLS/C0205250 denotes higher
T812 117-126 UMLS/C1549781 denotes contained
T811 52-68 UP/P07353 denotes interferon gamma
T807 52-68 UP/Q647G2 denotes interferon gamma
T804 52-68 UP/Q865Y4 denotes interferon gamma
T797 38-48 UMLS/C1628982 denotes inhibition
T795 52-68 UP/Q5CCK0 denotes interferon gamma
T792 52-68 UP/P28341 denotes interferon gamma
T787 52-68 UP/Q9TV67 denotes interferon gamma
T784 52-68 UP/O77763 denotes interferon gamma
T719 52-68 UP/A4PIZ9 denotes interferon gamma
T715 52-68 UP/Q25BC0 denotes interferon gamma
T712 52-68 UP/P01580 denotes interferon gamma
T706 92-99 UMLS/C0039194 denotes T cells
T697 52-68 UP/Q1WM28 denotes interferon gamma
T692 81-86 UMLS/C0229664 denotes Blood
T681 23-28 UMLS/C1149215 denotes IL-10
T676 52-68 UP/O73915 denotes interferon gamma
T673 52-68 UP/Q9YGB9 denotes interferon gamma
T669 52-68 UP/P79154 denotes interferon gamma
T664 52-68 UP/P01579 denotes interferon gamma
T654 10-14 UMLS/C1149241 denotes IL-6
T653 52-68 UP/P42162 denotes interferon gamma
T646 52-68 UP/P17773 denotes interferon gamma
T642 52-68 UP/P42160 denotes interferon gamma
T636 52-68 UP/O57608 denotes interferon gamma
T629 52-68 UP/O57603 denotes interferon gamma
T625 10-14 UMLS/C1527132 denotes IL-6
T624 52-68 UP/Q2PE75 denotes interferon gamma
T621 52-68 UP/Q8MKF5 denotes interferon gamma
T615 23-28 UMLS/C1522550 denotes IL-10
T608 23-28 UMLS/C1334098 denotes IL-10
T603 52-68 UP/P28333 denotes interferon gamma
T600 52-68 UP/Q866Y6 denotes interferon gamma
T595 127-133 UMLS/C1561957 denotes higher
T594 127-133 UMLS/C1561958 denotes higher
T593 52-68 UP/Q5I6S9 denotes interferon gamma
T590 10-14 UMLS/C0021760 denotes IL-6
T588 52-68 UP/Q865W6 denotes interferon gamma
T585 108-116 UMLS/C0030705 denotes patients
T579 52-68 UP/P17803 denotes interferon gamma
T576 10-14 UMLS/C1334122 denotes IL-6
T575 52-68 UMLS/C0021740 denotes interferon gamma
T571 52-68 UMLS/C0021745 denotes interferon gamma
T568 52-68 UP/Q9TTB0 denotes interferon gamma
T565 108-116 UMLS/C1578479 denotes patients
T558 108-116 UMLS/C1578483 denotes patients
T554 108-116 UMLS/C1578480 denotes patients
T550 108-116 UMLS/C1578481 denotes patients
T545 108-116 UMLS/C1578486 denotes patients
T540 108-116 UMLS/C1578484 denotes patients
T535 108-116 UMLS/C1578485 denotes patients
T527 81-86 UMLS/C0392895 denotes Blood
T509 52-68 UP/Q865X1 denotes interferon gamma
T469 52-68 UP/P42161 denotes interferon gamma
T780 52-68 UP/O57571 denotes interferon gamma
T770 81-86 UMLS/C0005767 denotes Blood
T767 81-86 UMLS/C0005768 denotes Blood
T763 52-68 UP/O35735 denotes interferon gamma
T758 52-68 UP/P63310 denotes interferon gamma
T752 108-116 UMLS/C1550655 denotes patients
T743 127-133 UMLS/C1522410 denotes higher
T742 52-68 UP/P49708 denotes interferon gamma
T739 52-68 UP/Q9QXX2 denotes interferon gamma
T734 38-48 UMLS/C0021467 denotes inhibition
T732 38-48 UMLS/C0021469 denotes inhibition
T725 52-68 UP/Q4ZH68 denotes interferon gamma
T503 52-68 UP/P30123 denotes interferon gamma
T498 23-28 UMLS/C0085295 denotes IL-10
T492 52-68 UP/O35497 denotes interferon gamma
T489 15-22 UMLS/C0392756 denotes reduced
T480 29-37 UMLS/C0127400 denotes mediated
T479 29-37 UMLS/C0086597 denotes mediated

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1322 10-14 NN denotes IL-6
T1321 5-9 IN denotes with
T1338 127-133 JJ denotes higher
T1337 117-126 VB denotes contained
T1336 108-116 NN denotes patients
T1335 105-107 NN denotes RA
T1334 100-104 IN denotes from
T1333 94-99 NN denotes cells
T1332 92-93 NN denotes T
T1331 87-91 JJ denotes CD4+
T1330 81-86 NN denotes Blood
T1329 69-79 NN denotes production
T1328 63-68 NN denotes gamma
T1327 52-62 NN denotes interferon
T1326 49-51 IN denotes of
T1325 38-48 NN denotes inhibition
T1324 23-37 JJ denotes IL-10-mediated
T1323 15-22 VB denotes reduced
R222 T1322 T1321 arg2Of IL-6,with
R223 T1325 T1323 arg2Of inhibition,reduced
R224 T1325 T1324 arg1Of inhibition,IL-10-mediated
R225 T1325 T1326 arg1Of inhibition,of
R226 T1329 T1326 arg2Of production,of
R227 T1329 T1327 arg1Of production,interferon
R228 T1329 T1328 arg1Of production,gamma
R229 T1333 T1330 arg1Of cells,Blood
R230 T1333 T1331 arg1Of cells,CD4+
R231 T1333 T1332 arg1Of cells,T
R232 T1333 T1334 arg1Of cells,from
R233 T1333 T1337 arg1Of cells,contained
R234 T1336 T1334 arg2Of patients,from
R235 T1336 T1335 arg1Of patients,RA

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T986 10-14 Protein denotes IL-6
T987 23-28 Protein denotes IL-10
T988 52-68 Protein denotes interferon gamma
T989 87-90 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1034 23-28 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1087 10-14 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T1039 52-68 http://www.uniprot.org/uniprot/P01579 denotes interferon gamma
T1046 87-90 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-BP

Id Subject Object Predicate Lexical cue
T897 52-79 http://purl.obolibrary.org/obo/GO_0032689 denotes interferon gamma production
T895 52-79 http://purl.obolibrary.org/obo/GO_0032649 denotes interferon gamma production
T893 52-79 http://purl.obolibrary.org/obo/GO_0032609 denotes interferon gamma production
T891 52-79 http://purl.obolibrary.org/obo/GO_0032729 denotes interferon gamma production

GO-CC

Id Subject Object Predicate Lexical cue
T1020 94-99 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T1012 10-14 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T1008 52-68 http://purl.obolibrary.org/obo/GO_0005133 denotes interferon gamma
T1003 23-28 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10

simple1

Id Subject Object Predicate Lexical cue
T1141 10-14 Protein denotes IL-6
T1142 23-28 Protein denotes IL-10
T1143 52-68 Protein denotes interferon gamma
T1144 87-90 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1938 10-14 Protein denotes IL-6
T1962 38-48 Negative_regulation denotes inhibition
T1961 69-79 Gene_expression denotes production
T1941 87-90 Protein denotes CD4
T1940 52-68 Protein denotes interferon gamma
T1939 23-28 Protein denotes IL-10
R636 T1940 T1961 themeOf interferon gamma,production
R643 T1961 T1962 themeOf production,inhibition

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1458 69-79 Gene_expression denotes production
T1457 38-48 Negative_regulation denotes inhibition
T1456 15-22 Negative_regulation denotes reduced
T1437 87-90 Protein denotes CD4
T1436 52-68 Protein denotes interferon gamma
T1435 23-28 Protein denotes IL-10
T1434 10-14 Protein denotes IL-6
R325 T1436 T1458 themeOf interferon gamma,production
R330 T1457 T1456 themeOf inhibition,reduced
R331 T1458 T1457 themeOf production,inhibition

DLUT931

Id Subject Object Predicate Lexical cue
T1505 29-37 Positive_regulation denotes mediated
T1504 15-22 Negative_regulation denotes reduced
T1503 38-48 Negative_regulation denotes inhibition
T1502 69-79 Gene_expression denotes production
T1482 87-90 Protein denotes CD4
T1481 52-68 Protein denotes interferon gamma
T1480 23-28 Protein denotes IL-10
T1479 10-14 Protein denotes IL-6
R339 T1479 T1504 causeOf IL-6,reduced
R340 T1480 T1505 causeOf IL-10,mediated
R341 T1481 T1502 themeOf interferon gamma,production
R350 T1502 T1503 themeOf production,inhibition
R351 T1503 T1504 themeOf inhibition,reduced
R352 T1503 T1505 themeOf inhibition,mediated
R353 T1505 T1503 themeOf mediated,inhibition

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1911 23-79 Regulation denotes IL-10-mediated inhibition of interferon gamma production
T1898 87-99 Entity denotes CD4+ T cells
T1874 10-14 Protein denotes IL-6
T1873 23-37 Protein denotes IL-10-mediated
T1869 105-107 Protein denotes RA
R614 T1873 T1911 causeOf IL-10-mediated,IL-10-mediated inhibition of interferon gamma production

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1745 127-133 JJR denotes higher
T1744 117-126 VBD denotes contained
T1743 108-116 NNS denotes patients
T1742 105-107 NNP denotes RA
T1741 100-104 IN denotes from
T1740 94-99 NNS denotes cells
T1739 92-93 NNP denotes T
T1738 90-91 VBD denotes +
T1737 87-90 NNP denotes CD4
T1736 81-86 NNP denotes Blood
T1735 79-80 . denotes .
T1734 69-79 NN denotes production
T1733 63-68 NN denotes gamma
T1732 52-62 NN denotes interferon
T1731 49-51 IN denotes of
T1730 38-48 NN denotes inhibition
T1729 23-37 JJ denotes IL-10-mediated
T1728 15-22 VBD denotes reduced
T1727 10-14 NNP denotes IL-6
T1726 5-9 IN denotes with
R500 T1727 T1726 pobj IL-6,with
R501 T1728 T1728 ROOT reduced,reduced
R502 T1729 T1730 amod IL-10-mediated,inhibition
R503 T1730 T1728 dobj inhibition,reduced
R504 T1731 T1730 prep of,inhibition
R505 T1732 T1734 compound interferon,production
R506 T1733 T1734 compound gamma,production
R507 T1734 T1731 pobj production,of
R508 T1735 T1728 punct .,reduced
R509 T1736 T1737 compound Blood,CD4
R510 T1737 T1738 nsubj CD4,+
R511 T1738 T1738 ROOT +,+
R512 T1739 T1740 compound T,cells
R513 T1740 T1738 dobj cells,+
R514 T1741 T1738 prep from,+
R515 T1742 T1743 compound RA,patients
R516 T1743 T1741 pobj patients,from
R517 T1744 T1738 conj contained,+

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1111 10-14 Protein denotes IL-6
T1112 23-28 Protein denotes IL-10
T1113 52-68 Protein denotes interferon gamma
T1114 69-79 Gene_expression denotes production
T1115 38-48 Negative_regulation denotes inhibition
T1116 15-22 Negative_regulation denotes reduced
T1117 87-91 Protein denotes CD4+
R660 T1112 T1115 causeOf IL-10,inhibition
R661 T1113 T1114 themeOf interferon gamma,production
R662 T1114 T1115 themeOf production,inhibition
R663 T1115 T1116 themeOf inhibition,reduced

testone

Id Subject Object Predicate Lexical cue
T74 69-79 Gene_expression denotes production
T73 38-48 Negative_regulation denotes inhibition
T72 29-37 Positive_regulation denotes mediated
T71 15-22 Negative_regulation denotes reduced
T54 87-90 Protein denotes CD4
T53 52-68 Protein denotes interferon gamma
T52 23-28 Protein denotes IL-10
T51 10-14 Protein denotes IL-6
R9 T51 T71 causeOf IL-6,reduced
R10 T52 T72 causeOf IL-10,mediated
R11 T53 T74 themeOf interferon gamma,production
R14 T72 T71 themeOf mediated,reduced
R15 T73 T71 themeOf inhibition,reduced
R16 T74 T73 themeOf production,inhibition