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PMC:1064873 / 1051-1182 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T421 118-127 OCCURRENCE denotes contained
T407 24-26 state denotes IL
T406 11-13 state denotes IL
T298 118-127 VBD denotes contained
T297 109-117 NNS denotes patients
T296 106-108 NNP denotes RA
T295 101-105 IN denotes from
T294 95-100 NNS denotes cells
T293 93-94 NN denotes T
T292 91-92 NN denotes +
T291 90-91 CD denotes 4
T290 88-90 NNP denotes CD
T289 82-87 NNP denotes Blood
T288 80-81 . denotes .
T287 70-80 NN denotes production
T286 64-69 NN denotes gamma
T285 53-63 NN denotes interferon
T284 50-52 IN denotes of
T283 39-49 NN denotes inhibition
T282 30-38 JJ denotes mediated
T281 29-30 : denotes -
T280 27-29 CD denotes 10
T279 24-27 NNP denotes IL-
T278 16-23 VBN denotes reduced
T277 14-15 CD denotes 6
T276 11-14 NNP denotes IL-
T275 6-10 IN denotes with
T274 0-5 NNS denotes cells

biosemtest

Id Subject Object Predicate Lexical cue
T878 70-80 UMLS/C1548180 denotes production
T874 53-69 UP/P01581 denotes interferon gamma
T860 53-69 UP/Q62574 denotes interferon gamma
T855 53-69 UP/Q7TSP4 denotes interferon gamma
T852 53-69 UP/Q8SPW9 denotes interferon gamma
T849 118-127 UMLS/C0332256 denotes contained
T843 53-69 UP/P63311 denotes interferon gamma
T834 53-69 UP/P63309 denotes interferon gamma
T830 109-117 UMLS/C1705908 denotes patients
T825 53-69 UP/P46402 denotes interferon gamma
T822 118-127 UMLS/C2700400 denotes contained
T812 118-127 UMLS/C1549781 denotes contained
T811 53-69 UP/P07353 denotes interferon gamma
T807 53-69 UP/Q647G2 denotes interferon gamma
T804 53-69 UP/Q865Y4 denotes interferon gamma
T797 39-49 UMLS/C1628982 denotes inhibition
T795 53-69 UP/Q5CCK0 denotes interferon gamma
T792 53-69 UP/P28341 denotes interferon gamma
T787 53-69 UP/Q9TV67 denotes interferon gamma
T784 53-69 UP/O77763 denotes interferon gamma
T719 53-69 UP/A4PIZ9 denotes interferon gamma
T715 53-69 UP/Q25BC0 denotes interferon gamma
T712 53-69 UP/P01580 denotes interferon gamma
T706 93-100 UMLS/C0039194 denotes T cells
T697 53-69 UP/Q1WM28 denotes interferon gamma
T692 82-87 UMLS/C0229664 denotes Blood
T681 24-29 UMLS/C1149215 denotes IL-10
T676 53-69 UP/O73915 denotes interferon gamma
T673 53-69 UP/Q9YGB9 denotes interferon gamma
T669 53-69 UP/P79154 denotes interferon gamma
T664 53-69 UP/P01579 denotes interferon gamma
T654 11-15 UMLS/C1149241 denotes IL-6
T653 53-69 UP/P42162 denotes interferon gamma
T646 53-69 UP/P17773 denotes interferon gamma
T642 53-69 UP/P42160 denotes interferon gamma
T636 53-69 UP/O57608 denotes interferon gamma
T629 53-69 UP/O57603 denotes interferon gamma
T625 11-15 UMLS/C1527132 denotes IL-6
T624 53-69 UP/Q2PE75 denotes interferon gamma
T621 53-69 UP/Q8MKF5 denotes interferon gamma
T615 24-29 UMLS/C1522550 denotes IL-10
T608 24-29 UMLS/C1334098 denotes IL-10
T603 53-69 UP/P28333 denotes interferon gamma
T600 53-69 UP/Q866Y6 denotes interferon gamma
T593 53-69 UP/Q5I6S9 denotes interferon gamma
T590 11-15 UMLS/C0021760 denotes IL-6
T588 53-69 UP/Q865W6 denotes interferon gamma
T585 109-117 UMLS/C0030705 denotes patients
T579 53-69 UP/P17803 denotes interferon gamma
T576 11-15 UMLS/C1334122 denotes IL-6
T575 53-69 UMLS/C0021740 denotes interferon gamma
T571 53-69 UMLS/C0021745 denotes interferon gamma
T568 53-69 UP/Q9TTB0 denotes interferon gamma
T565 109-117 UMLS/C1578479 denotes patients
T558 109-117 UMLS/C1578483 denotes patients
T554 109-117 UMLS/C1578480 denotes patients
T550 109-117 UMLS/C1578481 denotes patients
T545 109-117 UMLS/C1578486 denotes patients
T540 109-117 UMLS/C1578484 denotes patients
T535 109-117 UMLS/C1578485 denotes patients
T527 82-87 UMLS/C0392895 denotes Blood
T509 53-69 UP/Q865X1 denotes interferon gamma
T469 53-69 UP/P42161 denotes interferon gamma
T780 53-69 UP/O57571 denotes interferon gamma
T770 82-87 UMLS/C0005767 denotes Blood
T767 82-87 UMLS/C0005768 denotes Blood
T763 53-69 UP/O35735 denotes interferon gamma
T758 53-69 UP/P63310 denotes interferon gamma
T752 109-117 UMLS/C1550655 denotes patients
T742 53-69 UP/P49708 denotes interferon gamma
T739 53-69 UP/Q9QXX2 denotes interferon gamma
T734 39-49 UMLS/C0021467 denotes inhibition
T732 39-49 UMLS/C0021469 denotes inhibition
T725 53-69 UP/Q4ZH68 denotes interferon gamma
T503 53-69 UP/P30123 denotes interferon gamma
T498 24-29 UMLS/C0085295 denotes IL-10
T492 53-69 UP/O35497 denotes interferon gamma
T489 16-23 UMLS/C0392756 denotes reduced
T480 30-38 UMLS/C0127400 denotes mediated
T479 30-38 UMLS/C0086597 denotes mediated

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1322 11-15 NN denotes IL-6
T1321 6-10 IN denotes with
T1320 0-5 NN denotes cells
T1337 118-127 VB denotes contained
T1336 109-117 NN denotes patients
T1335 106-108 NN denotes RA
T1334 101-105 IN denotes from
T1333 95-100 NN denotes cells
T1332 93-94 NN denotes T
T1331 88-92 JJ denotes CD4+
T1330 82-87 NN denotes Blood
T1329 70-80 NN denotes production
T1328 64-69 NN denotes gamma
T1327 53-63 NN denotes interferon
T1326 50-52 IN denotes of
T1325 39-49 NN denotes inhibition
T1324 24-38 JJ denotes IL-10-mediated
T1323 16-23 VB denotes reduced
R222 T1322 T1321 arg2Of IL-6,with
R223 T1325 T1323 arg2Of inhibition,reduced
R224 T1325 T1324 arg1Of inhibition,IL-10-mediated
R225 T1325 T1326 arg1Of inhibition,of
R226 T1329 T1326 arg2Of production,of
R227 T1329 T1327 arg1Of production,interferon
R228 T1329 T1328 arg1Of production,gamma
R229 T1333 T1330 arg1Of cells,Blood
R230 T1333 T1331 arg1Of cells,CD4+
R231 T1333 T1332 arg1Of cells,T
R232 T1333 T1334 arg1Of cells,from
R233 T1333 T1337 arg1Of cells,contained
R234 T1336 T1334 arg2Of patients,from
R235 T1336 T1335 arg1Of patients,RA

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T986 11-15 Protein denotes IL-6
T987 24-29 Protein denotes IL-10
T988 53-69 Protein denotes interferon gamma
T989 88-91 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1034 24-29 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1087 11-15 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T1039 53-69 http://www.uniprot.org/uniprot/P01579 denotes interferon gamma
T1046 88-91 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-BP

Id Subject Object Predicate Lexical cue
T897 53-80 http://purl.obolibrary.org/obo/GO_0032689 denotes interferon gamma production
T895 53-80 http://purl.obolibrary.org/obo/GO_0032649 denotes interferon gamma production
T893 53-80 http://purl.obolibrary.org/obo/GO_0032609 denotes interferon gamma production
T891 53-80 http://purl.obolibrary.org/obo/GO_0032729 denotes interferon gamma production

GO-CC

Id Subject Object Predicate Lexical cue
T1020 95-100 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T1019 0-5 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T1012 11-15 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T1008 53-69 http://purl.obolibrary.org/obo/GO_0005133 denotes interferon gamma
T1003 24-29 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10

simple1

Id Subject Object Predicate Lexical cue
T1141 11-15 Protein denotes IL-6
T1142 24-29 Protein denotes IL-10
T1143 53-69 Protein denotes interferon gamma
T1144 88-91 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1938 11-15 Protein denotes IL-6
T1962 39-49 Negative_regulation denotes inhibition
T1961 70-80 Gene_expression denotes production
T1941 88-91 Protein denotes CD4
T1940 53-69 Protein denotes interferon gamma
T1939 24-29 Protein denotes IL-10
R636 T1940 T1961 themeOf interferon gamma,production
R643 T1961 T1962 themeOf production,inhibition

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1458 70-80 Gene_expression denotes production
T1457 39-49 Negative_regulation denotes inhibition
T1456 16-23 Negative_regulation denotes reduced
T1437 88-91 Protein denotes CD4
T1436 53-69 Protein denotes interferon gamma
T1435 24-29 Protein denotes IL-10
T1434 11-15 Protein denotes IL-6
R325 T1436 T1458 themeOf interferon gamma,production
R330 T1457 T1456 themeOf inhibition,reduced
R331 T1458 T1457 themeOf production,inhibition

DLUT931

Id Subject Object Predicate Lexical cue
T1505 30-38 Positive_regulation denotes mediated
T1504 16-23 Negative_regulation denotes reduced
T1503 39-49 Negative_regulation denotes inhibition
T1502 70-80 Gene_expression denotes production
T1482 88-91 Protein denotes CD4
T1481 53-69 Protein denotes interferon gamma
T1480 24-29 Protein denotes IL-10
T1479 11-15 Protein denotes IL-6
R339 T1479 T1504 causeOf IL-6,reduced
R340 T1480 T1505 causeOf IL-10,mediated
R341 T1481 T1502 themeOf interferon gamma,production
R350 T1502 T1503 themeOf production,inhibition
R351 T1503 T1504 themeOf inhibition,reduced
R352 T1503 T1505 themeOf inhibition,mediated
R353 T1505 T1503 themeOf mediated,inhibition

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1911 24-80 Regulation denotes IL-10-mediated inhibition of interferon gamma production
T1898 88-100 Entity denotes CD4+ T cells
T1874 11-15 Protein denotes IL-6
T1873 24-38 Protein denotes IL-10-mediated
T1869 106-108 Protein denotes RA
R614 T1873 T1911 causeOf IL-10-mediated,IL-10-mediated inhibition of interferon gamma production

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1744 118-127 VBD denotes contained
T1743 109-117 NNS denotes patients
T1742 106-108 NNP denotes RA
T1741 101-105 IN denotes from
T1740 95-100 NNS denotes cells
T1739 93-94 NNP denotes T
T1738 91-92 VBD denotes +
T1737 88-91 NNP denotes CD4
T1736 82-87 NNP denotes Blood
T1735 80-81 . denotes .
T1734 70-80 NN denotes production
T1733 64-69 NN denotes gamma
T1732 53-63 NN denotes interferon
T1731 50-52 IN denotes of
T1730 39-49 NN denotes inhibition
T1729 24-38 JJ denotes IL-10-mediated
T1728 16-23 VBD denotes reduced
T1727 11-15 NNP denotes IL-6
T1726 6-10 IN denotes with
T1725 0-5 NNS denotes cells
R500 T1727 T1726 pobj IL-6,with
R501 T1728 T1728 ROOT reduced,reduced
R502 T1729 T1730 amod IL-10-mediated,inhibition
R503 T1730 T1728 dobj inhibition,reduced
R504 T1731 T1730 prep of,inhibition
R505 T1732 T1734 compound interferon,production
R506 T1733 T1734 compound gamma,production
R507 T1734 T1731 pobj production,of
R508 T1735 T1728 punct .,reduced
R509 T1736 T1737 compound Blood,CD4
R510 T1737 T1738 nsubj CD4,+
R511 T1738 T1738 ROOT +,+
R512 T1739 T1740 compound T,cells
R513 T1740 T1738 dobj cells,+
R514 T1741 T1738 prep from,+
R515 T1742 T1743 compound RA,patients
R516 T1743 T1741 pobj patients,from
R517 T1744 T1738 conj contained,+

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1111 11-15 Protein denotes IL-6
T1112 24-29 Protein denotes IL-10
T1113 53-69 Protein denotes interferon gamma
T1114 70-80 Gene_expression denotes production
T1115 39-49 Negative_regulation denotes inhibition
T1116 16-23 Negative_regulation denotes reduced
T1117 88-92 Protein denotes CD4+
R660 T1112 T1115 causeOf IL-10,inhibition
R661 T1113 T1114 themeOf interferon gamma,production
R662 T1114 T1115 themeOf production,inhibition
R663 T1115 T1116 themeOf inhibition,reduced

testone

Id Subject Object Predicate Lexical cue
T74 70-80 Gene_expression denotes production
T73 39-49 Negative_regulation denotes inhibition
T72 30-38 Positive_regulation denotes mediated
T71 16-23 Negative_regulation denotes reduced
T54 88-91 Protein denotes CD4
T53 53-69 Protein denotes interferon gamma
T52 24-29 Protein denotes IL-10
T51 11-15 Protein denotes IL-6
R9 T51 T71 causeOf IL-6,reduced
R10 T52 T72 causeOf IL-10,mediated
R11 T53 T74 themeOf interferon gamma,production
R14 T72 T71 themeOf mediated,reduced
R15 T73 T71 themeOf inhibition,reduced
R16 T74 T73 themeOf production,inhibition