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PMC:1064873 / 1017-1210 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T421 152-161 OCCURRENCE denotes contained
T407 58-60 state denotes IL
T406 45-47 state denotes IL
T303 190-192 IN denotes of
T302 179-189 NN denotes suppressor
T301 176-178 IN denotes of
T300 169-175 NNS denotes levels
T299 162-168 JJR denotes higher
T298 152-161 VBD denotes contained
T297 143-151 NNS denotes patients
T296 140-142 NNP denotes RA
T295 135-139 IN denotes from
T294 129-134 NNS denotes cells
T293 127-128 NN denotes T
T292 125-126 NN denotes +
T291 124-125 CD denotes 4
T290 122-124 NNP denotes CD
T289 116-121 NNP denotes Blood
T288 114-115 . denotes .
T287 104-114 NN denotes production
T286 98-103 NN denotes gamma
T285 87-97 NN denotes interferon
T284 84-86 IN denotes of
T283 73-83 NN denotes inhibition
T282 64-72 JJ denotes mediated
T281 63-64 : denotes -
T280 61-63 CD denotes 10
T279 58-61 NNP denotes IL-
T278 50-57 VBN denotes reduced
T277 48-49 CD denotes 6
T276 45-48 NNP denotes IL-
T275 40-44 IN denotes with
T274 34-39 NNS denotes cells
T273 32-33 NN denotes T
T272 30-31 NN denotes +
T271 29-30 CD denotes 4
T270 27-29 NNP denotes CD
T269 20-26 JJ denotes normal
T268 17-19 IN denotes of
T267 3-16 NNP denotes Preincubation
T266 1-2 . denotes .

biosemtest

Id Subject Object Predicate Lexical cue
T878 104-114 UMLS/C1548180 denotes production
T874 87-103 UP/P01581 denotes interferon gamma
T870 162-168 UMLS/C1299351 denotes higher
T864 20-26 UMLS/C0205307 denotes normal
T860 87-103 UP/Q62574 denotes interferon gamma
T855 87-103 UP/Q7TSP4 denotes interferon gamma
T852 87-103 UP/Q8SPW9 denotes interferon gamma
T849 152-161 UMLS/C0332256 denotes contained
T843 87-103 UP/P63311 denotes interferon gamma
T834 87-103 UP/P63309 denotes interferon gamma
T830 143-151 UMLS/C1705908 denotes patients
T825 87-103 UP/P46402 denotes interferon gamma
T822 152-161 UMLS/C2700400 denotes contained
T819 162-168 UMLS/C0205250 denotes higher
T812 152-161 UMLS/C1549781 denotes contained
T811 87-103 UP/P07353 denotes interferon gamma
T807 87-103 UP/Q647G2 denotes interferon gamma
T804 87-103 UP/Q865Y4 denotes interferon gamma
T801 20-26 UMLS/C2347086 denotes normal
T797 73-83 UMLS/C1628982 denotes inhibition
T795 87-103 UP/Q5CCK0 denotes interferon gamma
T792 87-103 UP/P28341 denotes interferon gamma
T787 87-103 UP/Q9TV67 denotes interferon gamma
T784 87-103 UP/O77763 denotes interferon gamma
T719 87-103 UP/A4PIZ9 denotes interferon gamma
T715 87-103 UP/Q25BC0 denotes interferon gamma
T712 87-103 UP/P01580 denotes interferon gamma
T706 127-134 UMLS/C0039194 denotes T cells
T705 32-39 UMLS/C0039194 denotes T cells
T697 87-103 UP/Q1WM28 denotes interferon gamma
T693 169-175 UMLS/C0456079 denotes levels
T692 116-121 UMLS/C0229664 denotes Blood
T681 58-63 UMLS/C1149215 denotes IL-10
T676 87-103 UP/O73915 denotes interferon gamma
T673 87-103 UP/Q9YGB9 denotes interferon gamma
T669 87-103 UP/P79154 denotes interferon gamma
T665 169-175 UMLS/C0441889 denotes levels
T664 87-103 UP/P01579 denotes interferon gamma
T654 45-49 UMLS/C1149241 denotes IL-6
T653 87-103 UP/P42162 denotes interferon gamma
T646 87-103 UP/P17773 denotes interferon gamma
T642 87-103 UP/P42160 denotes interferon gamma
T636 87-103 UP/O57608 denotes interferon gamma
T629 87-103 UP/O57603 denotes interferon gamma
T625 45-49 UMLS/C1527132 denotes IL-6
T624 87-103 UP/Q2PE75 denotes interferon gamma
T621 87-103 UP/Q8MKF5 denotes interferon gamma
T615 58-63 UMLS/C1522550 denotes IL-10
T608 58-63 UMLS/C1334098 denotes IL-10
T603 87-103 UP/P28333 denotes interferon gamma
T600 87-103 UP/Q866Y6 denotes interferon gamma
T595 162-168 UMLS/C1561957 denotes higher
T594 162-168 UMLS/C1561958 denotes higher
T593 87-103 UP/Q5I6S9 denotes interferon gamma
T590 45-49 UMLS/C0021760 denotes IL-6
T588 87-103 UP/Q865W6 denotes interferon gamma
T585 143-151 UMLS/C0030705 denotes patients
T579 87-103 UP/P17803 denotes interferon gamma
T576 45-49 UMLS/C1334122 denotes IL-6
T575 87-103 UMLS/C0021740 denotes interferon gamma
T571 87-103 UMLS/C0021745 denotes interferon gamma
T568 87-103 UP/Q9TTB0 denotes interferon gamma
T565 143-151 UMLS/C1578479 denotes patients
T558 143-151 UMLS/C1578483 denotes patients
T554 143-151 UMLS/C1578480 denotes patients
T550 143-151 UMLS/C1578481 denotes patients
T545 143-151 UMLS/C1578486 denotes patients
T540 143-151 UMLS/C1578484 denotes patients
T535 143-151 UMLS/C1578485 denotes patients
T527 116-121 UMLS/C0392895 denotes Blood
T509 87-103 UP/Q865X1 denotes interferon gamma
T474 20-26 UMLS/C1550457 denotes normal
T469 87-103 UP/P42161 denotes interferon gamma
T449 20-26 UMLS/C1551394 denotes normal
T780 87-103 UP/O57571 denotes interferon gamma
T773 20-26 UMLS/C0439166 denotes normal
T770 116-121 UMLS/C0005767 denotes Blood
T767 116-121 UMLS/C0005768 denotes Blood
T763 87-103 UP/O35735 denotes interferon gamma
T758 87-103 UP/P63310 denotes interferon gamma
T752 143-151 UMLS/C1550655 denotes patients
T743 162-168 UMLS/C1522410 denotes higher
T742 87-103 UP/P49708 denotes interferon gamma
T739 87-103 UP/Q9QXX2 denotes interferon gamma
T736 20-26 UMLS/C1873497 denotes normal
T734 73-83 UMLS/C0021467 denotes inhibition
T732 73-83 UMLS/C0021469 denotes inhibition
T725 87-103 UP/Q4ZH68 denotes interferon gamma
T503 87-103 UP/P30123 denotes interferon gamma
T498 58-63 UMLS/C0085295 denotes IL-10
T492 87-103 UP/O35497 denotes interferon gamma
T489 50-57 UMLS/C0392756 denotes reduced
T487 20-26 UMLS/C1704701 denotes normal
T480 64-72 UMLS/C0127400 denotes mediated
T479 64-72 UMLS/C0086597 denotes mediated

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1322 45-49 NN denotes IL-6
T1321 40-44 IN denotes with
T1320 34-39 NN denotes cells
T1319 32-33 NN denotes T
T1318 27-31 JJ denotes CD4+
T1317 20-26 JJ denotes normal
T1316 17-19 IN denotes of
T1315 3-16 NN denotes Preincubation
T1342 190-192 IN denotes of
T1341 179-189 NN denotes suppressor
T1340 176-178 IN denotes of
T1339 169-175 NN denotes levels
T1338 162-168 JJ denotes higher
T1337 152-161 VB denotes contained
T1336 143-151 NN denotes patients
T1335 140-142 NN denotes RA
T1334 135-139 IN denotes from
T1333 129-134 NN denotes cells
T1332 127-128 NN denotes T
T1331 122-126 JJ denotes CD4+
T1330 116-121 NN denotes Blood
T1329 104-114 NN denotes production
T1328 98-103 NN denotes gamma
T1327 87-97 NN denotes interferon
T1326 84-86 IN denotes of
T1325 73-83 NN denotes inhibition
T1324 58-72 JJ denotes IL-10-mediated
T1323 50-57 VB denotes reduced
R215 T1315 T1316 arg1Of Preincubation,of
R216 T1315 T1321 arg1Of Preincubation,with
R217 T1315 T1323 arg1Of Preincubation,reduced
R218 T1320 T1316 arg2Of cells,of
R219 T1320 T1317 arg1Of cells,normal
R220 T1320 T1318 arg1Of cells,CD4+
R221 T1320 T1319 arg1Of cells,T
R222 T1322 T1321 arg2Of IL-6,with
R223 T1325 T1323 arg2Of inhibition,reduced
R224 T1325 T1324 arg1Of inhibition,IL-10-mediated
R225 T1325 T1326 arg1Of inhibition,of
R226 T1329 T1326 arg2Of production,of
R227 T1329 T1327 arg1Of production,interferon
R228 T1329 T1328 arg1Of production,gamma
R229 T1333 T1330 arg1Of cells,Blood
R230 T1333 T1331 arg1Of cells,CD4+
R231 T1333 T1332 arg1Of cells,T
R232 T1333 T1334 arg1Of cells,from
R233 T1333 T1337 arg1Of cells,contained
R234 T1336 T1334 arg2Of patients,from
R235 T1336 T1335 arg1Of patients,RA
R238 T1339 T1338 arg1Of levels,higher
R239 T1339 T1340 arg1Of levels,of
R241 T1341 T1340 arg2Of suppressor,of
R242 T1341 T1342 arg1Of suppressor,of

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T985 27-30 Protein denotes CD4
T986 45-49 Protein denotes IL-6
T987 58-63 Protein denotes IL-10
T988 87-103 Protein denotes interferon gamma
T989 122-125 Protein denotes CD4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1034 58-63 http://www.uniprot.org/uniprot/P22301 denotes IL-10
T1087 45-49 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T1039 87-103 http://www.uniprot.org/uniprot/P01579 denotes interferon gamma
T1045 27-30 http://www.uniprot.org/uniprot/P01730 denotes CD4
T1046 122-125 http://www.uniprot.org/uniprot/P01730 denotes CD4

GO-BP

Id Subject Object Predicate Lexical cue
T897 87-114 http://purl.obolibrary.org/obo/GO_0032689 denotes interferon gamma production
T895 87-114 http://purl.obolibrary.org/obo/GO_0032649 denotes interferon gamma production
T893 87-114 http://purl.obolibrary.org/obo/GO_0032609 denotes interferon gamma production
T891 87-114 http://purl.obolibrary.org/obo/GO_0032729 denotes interferon gamma production

GO-CC

Id Subject Object Predicate Lexical cue
T1020 129-134 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T1019 34-39 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T1012 45-49 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T1008 87-103 http://purl.obolibrary.org/obo/GO_0005133 denotes interferon gamma
T1003 58-63 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10

sentences

Id Subject Object Predicate Lexical cue
T887 3-115 Sentence denotes Preincubation of normal CD4+ T cells with IL-6 reduced IL-10-mediated inhibition of interferon gamma production.
T7 3-115 Sentence denotes Preincubation of normal CD4+ T cells with IL-6 reduced IL-10-mediated inhibition of interferon gamma production.

simple1

Id Subject Object Predicate Lexical cue
T1140 27-30 Protein denotes CD4
T1141 45-49 Protein denotes IL-6
T1142 58-63 Protein denotes IL-10
T1143 87-103 Protein denotes interferon gamma
T1144 122-125 Protein denotes CD4

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T1938 45-49 Protein denotes IL-6
T1937 27-30 Protein denotes CD4
T1962 73-83 Negative_regulation denotes inhibition
T1961 104-114 Gene_expression denotes production
T1941 122-125 Protein denotes CD4
T1940 87-103 Protein denotes interferon gamma
T1939 58-63 Protein denotes IL-10
R636 T1940 T1961 themeOf interferon gamma,production
R643 T1961 T1962 themeOf production,inhibition

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1458 104-114 Gene_expression denotes production
T1457 73-83 Negative_regulation denotes inhibition
T1456 50-57 Negative_regulation denotes reduced
T1437 122-125 Protein denotes CD4
T1436 87-103 Protein denotes interferon gamma
T1435 58-63 Protein denotes IL-10
T1434 45-49 Protein denotes IL-6
T1433 27-30 Protein denotes CD4
R325 T1436 T1458 themeOf interferon gamma,production
R330 T1457 T1456 themeOf inhibition,reduced
R331 T1458 T1457 themeOf production,inhibition

DLUT931

Id Subject Object Predicate Lexical cue
T1505 64-72 Positive_regulation denotes mediated
T1504 50-57 Negative_regulation denotes reduced
T1503 73-83 Negative_regulation denotes inhibition
T1502 104-114 Gene_expression denotes production
T1482 122-125 Protein denotes CD4
T1481 87-103 Protein denotes interferon gamma
T1480 58-63 Protein denotes IL-10
T1479 45-49 Protein denotes IL-6
T1478 27-30 Protein denotes CD4
R339 T1479 T1504 causeOf IL-6,reduced
R340 T1480 T1505 causeOf IL-10,mediated
R341 T1481 T1502 themeOf interferon gamma,production
R350 T1502 T1503 themeOf production,inhibition
R351 T1503 T1504 themeOf inhibition,reduced
R352 T1503 T1505 themeOf inhibition,mediated
R353 T1505 T1503 themeOf mediated,inhibition

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T1911 58-114 Regulation denotes IL-10-mediated inhibition of interferon gamma production
T1901 17-30 Protein denotes of normal CD4
T1898 122-134 Entity denotes CD4+ T cells
T1874 45-49 Protein denotes IL-6
T1873 58-72 Protein denotes IL-10-mediated
T1872 32-49 Entity denotes T cells with IL-6
T1869 140-142 Protein denotes RA
T1918 32-114 Negative_regulation denotes T cells with IL-6 reduced IL-10-mediated inhibition of interferon gamma production
R613 T1872 T1918 causeOf T cells with IL-6,T cells with IL-6 reduced IL-10-mediated inhibition of interferon gamma production
R614 T1873 T1911 causeOf IL-10-mediated,IL-10-mediated inhibition of interferon gamma production

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1749 190-192 IN denotes of
T1748 179-189 NN denotes suppressor
T1747 176-178 IN denotes of
T1746 169-175 NNS denotes levels
T1745 162-168 JJR denotes higher
T1744 152-161 VBD denotes contained
T1743 143-151 NNS denotes patients
T1742 140-142 NNP denotes RA
T1741 135-139 IN denotes from
T1740 129-134 NNS denotes cells
T1739 127-128 NNP denotes T
T1738 125-126 VBD denotes +
T1737 122-125 NNP denotes CD4
T1736 116-121 NNP denotes Blood
T1735 114-115 . denotes .
T1734 104-114 NN denotes production
T1733 98-103 NN denotes gamma
T1732 87-97 NN denotes interferon
T1731 84-86 IN denotes of
T1730 73-83 NN denotes inhibition
T1729 58-72 JJ denotes IL-10-mediated
T1728 50-57 VBD denotes reduced
T1727 45-49 NNP denotes IL-6
T1726 40-44 IN denotes with
T1725 34-39 NNS denotes cells
T1724 32-33 NNP denotes T
T1723 30-31 CD denotes +
T1722 27-30 NNP denotes CD4
T1721 20-26 JJ denotes normal
T1720 17-19 IN denotes of
T1719 3-16 NN denotes Preincubation
T1718 1-2 . denotes .
R492 T1719 T1728 nsubj Preincubation,reduced
R493 T1720 T1719 prep of,Preincubation
R494 T1721 T1725 amod normal,cells
R495 T1722 T1725 compound CD4,cells
R496 T1723 T1725 nummod +,cells
R497 T1724 T1725 compound T,cells
R498 T1725 T1720 pobj cells,of
R499 T1726 T1719 prep with,Preincubation
R500 T1727 T1726 pobj IL-6,with
R501 T1728 T1728 ROOT reduced,reduced
R502 T1729 T1730 amod IL-10-mediated,inhibition
R503 T1730 T1728 dobj inhibition,reduced
R504 T1731 T1730 prep of,inhibition
R505 T1732 T1734 compound interferon,production
R506 T1733 T1734 compound gamma,production
R507 T1734 T1731 pobj production,of
R508 T1735 T1728 punct .,reduced
R509 T1736 T1737 compound Blood,CD4
R510 T1737 T1738 nsubj CD4,+
R511 T1738 T1738 ROOT +,+
R512 T1739 T1740 compound T,cells
R513 T1740 T1738 dobj cells,+
R514 T1741 T1738 prep from,+
R515 T1742 T1743 compound RA,patients
R516 T1743 T1741 pobj patients,from
R517 T1744 T1738 conj contained,+
R518 T1745 T1746 amod higher,levels
R519 T1746 T1744 dobj levels,contained
R520 T1747 T1746 prep of,levels
R521 T1748 T1747 pobj suppressor,of
R522 T1749 T1748 prep of,suppressor

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1110 27-31 Protein denotes CD4+
T1111 45-49 Protein denotes IL-6
T1112 58-63 Protein denotes IL-10
T1113 87-103 Protein denotes interferon gamma
T1114 104-114 Gene_expression denotes production
T1115 73-83 Negative_regulation denotes inhibition
T1116 50-57 Negative_regulation denotes reduced
T1117 122-126 Protein denotes CD4+
R660 T1112 T1115 causeOf IL-10,inhibition
R661 T1113 T1114 themeOf interferon gamma,production
R662 T1114 T1115 themeOf production,inhibition
R663 T1115 T1116 themeOf inhibition,reduced

testone

Id Subject Object Predicate Lexical cue
T74 104-114 Gene_expression denotes production
T73 73-83 Negative_regulation denotes inhibition
T72 64-72 Positive_regulation denotes mediated
T71 50-57 Negative_regulation denotes reduced
T54 122-125 Protein denotes CD4
T53 87-103 Protein denotes interferon gamma
T52 58-63 Protein denotes IL-10
T51 45-49 Protein denotes IL-6
T50 27-30 Protein denotes CD4
R9 T51 T71 causeOf IL-6,reduced
R10 T52 T72 causeOf IL-10,mediated
R11 T53 T74 themeOf interferon gamma,production
R14 T72 T71 themeOf mediated,reduced
R15 T73 T71 themeOf inhibition,reduced
R16 T74 T73 themeOf production,inhibition