CORD-19:05fc8f48129cdd80e0edf6734229c17f53a03076
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/CORD-19/sourceid/05fc8f48129cdd80e0edf6734229c17f53a03076","sourcedb":"CORD-19","sourceid":"05fc8f48129cdd80e0edf6734229c17f53a03076","text":"Supplemental material, tables S1 and S2a-c Adaptive evolution of virus-sensing toll-like receptor 8 in bats\n\n. Investigated bat species, sample accession numbers due to the IZW biobank and geographic origin. 1 872 R1c revers TGGAGGGAAGTGCTRGAGAGGTTG 1 1110 F3 forward TTGCAYTTAARRGGTTATGTGTTCCAG 3 1110 F3Rhi forward TTGCACTTAGAAGGTTATGTGTTCCAG 3 1110 F3Vesp forward TTGCATTTAAGAGGTTATGTGTTCCAG 3 1076 F3Vamp forward CCAAAACTTCTCTAATCTTACATCTC 3 1187 R2Rhi revers AAGTTAACACCCAAGTTGATAGTC 2 1187 R2Nyc revers AATAAAGTTAACGCCCAAGTTGATAGT 2 1187 R2Car revers AATGAAGTTCACGCCCAAGTCGATAGT 2 1192 R2 revers AATAAARTTAAYVCCCAAGTTGA 2 1196 R2Noc revers TTTGCTTAATGAAGTTCACGCCCAAG 2 1551 F4Rhi forward CAAGCATTAAATGGAACTGAATTTTCAG 4 1662 F4Noc forward TTTGCTTAATGAAGTTCACGCCCAAG 4 1692 F4 forward CACTATTTCMRAATMGCAGGGGT 4 1818 R3 revers CCACTRAAAACTAATTSTTYCAGGGA 3 1838 R3Rhi revers AATTGATCAAGGCAGTTGCCACT 3 2307 F5 forward AACCCYTTWGAMTGYACCTGTGAC 5 2307 F5Rhi forward AACCCTTTTGACTGTACTTGTGAC 5 2426 R4 revers AGCTCYAGAGTCAYAATRCTCTTC 4 2448 R4aRhi R5short revers CRTCAGTTAGTATTGCTTAATG 5 a nucleotide position according to the nucleotide sequence of Eidolon helvum, starting point is the 3' end of forward primers and the 5'end of revers primers b forward and revers primers were used in different combinations, overspanning different fragmentlengths in different bat species c according to sequencing analyses Table S3a . Nucleotide/amino acid sequence percent identities of the whole TLR8 sequences between investigated bat taxa § and between the equine and human orthologous. ","tracks":[{"project":"CORD-19_Custom_license_subset","denotations":[{"id":"T1","span":{"begin":0,"end":107},"obj":"Sentence"},{"id":"T2","span":{"begin":109,"end":110},"obj":"Sentence"},{"id":"T3","span":{"begin":111,"end":207},"obj":"Sentence"},{"id":"T4","span":{"begin":208,"end":1509},"obj":"Sentence"},{"id":"T5","span":{"begin":1510,"end":1665},"obj":"Sentence"}],"attributes":[{"subj":"T1","pred":"source","obj":"CORD-19_Custom_license_subset"},{"subj":"T2","pred":"source","obj":"CORD-19_Custom_license_subset"},{"subj":"T3","pred":"source","obj":"CORD-19_Custom_license_subset"},{"subj":"T4","pred":"source","obj":"CORD-19_Custom_license_subset"},{"subj":"T5","pred":"source","obj":"CORD-19_Custom_license_subset"}]},{"project":"CORD-19-Sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":107},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":109,"end":110},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":111,"end":207},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":208,"end":1509},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":1510,"end":1665},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"CORD-19-Sentences"},{"subj":"TextSentencer_T2","pred":"source","obj":"CORD-19-Sentences"},{"subj":"TextSentencer_T3","pred":"source","obj":"CORD-19-Sentences"},{"subj":"TextSentencer_T4","pred":"source","obj":"CORD-19-Sentences"},{"subj":"TextSentencer_T5","pred":"source","obj":"CORD-19-Sentences"}]},{"project":"CORD-19-PD-MONDO","denotations":[{"id":"T1","span":{"begin":632,"end":634},"obj":"Disease"},{"id":"T2","span":{"begin":885,"end":887},"obj":"Disease"},{"id":"T3","span":{"begin":1082,"end":1084},"obj":"Disease"},{"id":"T89313","span":{"begin":632,"end":634},"obj":"Disease"},{"id":"T914","span":{"begin":885,"end":887},"obj":"Disease"},{"id":"T46061","span":{"begin":1082,"end":1084},"obj":"Disease"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MONDO_0019903"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/MONDO_0019904"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/MONDO_0015439"},{"id":"A6887","pred":"mondo_id","subj":"T89313","obj":"http://purl.obolibrary.org/obo/MONDO_0019903"},{"id":"A86424","pred":"mondo_id","subj":"T914","obj":"http://purl.obolibrary.org/obo/MONDO_0019904"},{"id":"A78638","pred":"mondo_id","subj":"T46061","obj":"http://purl.obolibrary.org/obo/MONDO_0015439"},{"subj":"T1","pred":"source","obj":"CORD-19-PD-MONDO"},{"subj":"T2","pred":"source","obj":"CORD-19-PD-MONDO"},{"subj":"T3","pred":"source","obj":"CORD-19-PD-MONDO"},{"subj":"T89313","pred":"source","obj":"CORD-19-PD-MONDO"},{"subj":"T914","pred":"source","obj":"CORD-19-PD-MONDO"},{"subj":"T46061","pred":"source","obj":"CORD-19-PD-MONDO"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"CORD-19_Custom_license_subset","color":"#93ec9b","default":true},{"id":"CORD-19-Sentences","color":"#ec93a4"},{"id":"CORD-19-PD-MONDO","color":"#93beec"}]}]}}