BB-norm@ldeleger:BB-norm-25204345
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bionlp-ost-19-BB-norm-dev
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| Id | Subject | Object | Predicate | Lexical cue | NCBI_Taxonomy | OntoBiotope |
|---|---|---|---|---|---|---|
| T1 | 0-113 | Title | denotes | Association of mutation patterns in GyrA and ParC genes with quinolone resistance levels in lactic acid bacteria. | ||
| T3 | 61-81 | Phenotype | denotes | quinolone resistance | OBT:002840 | |
| T4 | 92-112 | Phenotype | denotes | lactic acid bacteria | OBT:000019 | |
| T2 | 114-1553 | Paragraph | denotes | The quinolone resistance of 19 lactic acid bacterial strains belonging to the genera Enterococcus and Lactobacillus isolated from the natural fermented koumiss and yoghurt were investigated. The objective of this study was to determine the quinolone resistance levels and to explore the association of the resistance with the mutation patterns in gyrA and parC genes, as is currently recommended by the Food and Agriculture Organization/World Health Organization Joint Expert Committee in Guidelines for Evaluation of Probiotics in Food for probiotic lactic acid bacteria drug resistance in 2001. The Oxford Cup method and double-tube dilution method were used to determine the quinolone resistance levels of the isolated strains. Generally, all of the 19 strains showed resistance towards norfloxacin and ciprofloxacin when the Oxford cup method was used, whereas the incidence was lower (to norfloxacin 89.5% and to ciprofloxacin 68.4%) when minimum inhibitory concentration breakpoints (CLSI M100-S23) were tested. Furthermore, gene sequencing was conducted on gyrA and parC of topoisomerase II of these isolated strains. The genetic basis for quinolone resistance may be closely related to mutations in gyrA genes as there were 10 mutation sites in amino-acid sequences encoded by gyrA genes in 10 quinolone resistance strains and 14 mutation sites in Enterococcus durans HZ28, whereas no typical mutations were detected in parC genes. | ||
| T5 | 118-138 | Phenotype | denotes | quinolone resistance | OBT:002840 | |
| T6 | 145-166 | Phenotype | denotes | lactic acid bacterial | OBT:000019 | |
| T7 | 199-211 | Microorganism | denotes | Enterococcus | 1350 | |
| T8 | 216-229 | Microorganism | denotes | Lactobacillus | 1578 | |
| T9 | 248-273 | Habitat | denotes | natural fermented koumiss | OBT:003210 | |
| T10 | 278-285 | Habitat | denotes | yoghurt | OBT:003241 | |
| T11 | 354-374 | Phenotype | denotes | quinolone resistance | OBT:002840 | |
| T12 | 420-430 | Phenotype | denotes | resistance | OBT:002840 | |
| T13 | 655-664 | Phenotype | denotes | probiotic | OBT:000827 | |
| T14 | 665-685 | Phenotype | denotes | lactic acid bacteria | OBT:000019 | |
| T15 | 686-701 | Phenotype | denotes | drug resistance | OBT:000598 | |
| T16 | 792-812 | Phenotype | denotes | quinolone resistance | OBT:002840 | |
| T18 | 885-915 | Phenotype | denotes | resistance towards norfloxacin | OBT:002824 | |
| T17-0 | 885-903 | _FRAGMENT | denotes | resistance towards | OBT:002773 | |
| T17-1 | 920-933 | Phenotype | denotes | ciprofloxacin | ||
| T19 | 1261-1281 | Phenotype | denotes | quinolone resistance | OBT:002840 | |
| T20 | 1416-1436 | Phenotype | denotes | quinolone resistance | OBT:002840 | |
| T21 | 1470-1494 | Microorganism | denotes | Enterococcus durans HZ28 | 53345 | |
| C-T17-0 | T17-1 | T17-0 | _lexicallyChainedTo | ciprofloxacin,resistance towards |