BB-norm@ldeleger:BB-norm-15358511 JSONTXT

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bionlp-ost-19-BB-norm-train

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue NCBI_Taxonomy OntoBiotope
T1 0-189 Title denotes Attachment of Escherichia coli O157:H7 grown in tryptic soy broth and nutrient broth to apple and lettuce surfaces as related to cell hydrophobicity, surface charge, and capsule production.
T3 0-10 Phenotype denotes Attachment OBT:000029
T4 14-38 Microorganism denotes Escherichia coli O157:H7 83334
T5 48-65 Habitat denotes tryptic soy broth OBT:000360
T6 56-59 Habitat denotes soy OBT:003304
T7 70-84 Habitat denotes nutrient broth OBT:000360
T9 88-93 Habitat denotes apple OBT:002341
T8-0 88-93 _FRAGMENT denotes apple OBT:000902
T8-1 106-114 Habitat denotes surfaces
T10 98-114 Habitat denotes lettuce surfaces OBT:000902
T11 98-105 Habitat denotes lettuce OBT:002506
T12 129-133 Habitat denotes cell OBT:000061
T13 170-188 Phenotype denotes capsule production OBT:000614
T2 190-1044 Paragraph denotes This study investigated the effect of growth in tryptic soy broth (TSB) and nutrient broth (NB) on the ability Escherichia coli O157:H7 to attach to lettuce and apple surfaces. In addition, cell surface hydrophobicity, charge and capsule production were determined on cells grown in these media. Cells grown in NB attached less to lettuce and apple surfaces than did those grown in TSB. TSB, but not NB, supported capsule production by E. coli O157:H7. Cells grown in TSB were more hydrophilic than those grown in NB. No difference was found in the electrokinetic properties of cells grown in these media. Electrostatic and hydrophobic interactions and surface proteins did not appear to play an important role in the attachment of E. coli O157:H7 to these surfaces. Of the factors studied, only capsule production was associated with attachment ability.
T14 238-255 Habitat denotes tryptic soy broth OBT:000360
T15 246-249 Habitat denotes soy OBT:003304
T16 257-260 Habitat denotes TSB OBT:000360
T17 266-280 Habitat denotes nutrient broth OBT:000360
T18 282-284 Habitat denotes NB OBT:000360
T19-0 293-300 _FRAGMENT denotes ability OBT:000029
T19-1 326-335 Phenotype denotes to attach
T20 301-325 Microorganism denotes Escherichia coli O157:H7 83334
T21 339-346 Habitat denotes lettuce OBT:002506
T22-0 339-346 _FRAGMENT denotes lettuce OBT:000902
T22-1 357-365 Habitat denotes surfaces
T24 351-365 Habitat denotes apple surfaces OBT:000902
T23 351-356 Habitat denotes apple OBT:002341
T25 380-384 Habitat denotes cell OBT:000061
T26 420-438 Phenotype denotes capsule production OBT:000614
T27 501-503 Habitat denotes NB OBT:000360
T28 521-528 Habitat denotes lettuce OBT:002506
T29-0 521-528 _FRAGMENT denotes lettuce OBT:000902
T29-1 539-547 Habitat denotes surfaces
T31 533-547 Habitat denotes apple surfaces OBT:000902
T30 533-538 Habitat denotes apple OBT:002341
T32 572-575 Habitat denotes TSB OBT:000360
T33 577-580 Habitat denotes TSB OBT:000360
T34 590-592 Habitat denotes NB OBT:000360
T35 604-622 Phenotype denotes capsule production OBT:000614
T36 626-641 Microorganism denotes E. coli O157:H7 83334
T37 658-661 Habitat denotes TSB OBT:000360
T38 704-706 Habitat denotes NB OBT:000360
T39 908-918 Phenotype denotes attachment OBT:000029
T40 922-937 Microorganism denotes E. coli O157:H7 83334
T41 986-1004 Phenotype denotes capsule production OBT:000614
T42 1025-1043 Phenotype denotes attachment ability OBT:000029
C-T8-0 T8-1 T8-0 _lexicallyChainedTo surfaces,apple
C-T19-0 T19-1 T19-0 _lexicallyChainedTo to attach,ability
C-T22-0 T22-1 T22-0 _lexicallyChainedTo surfaces,lettuce
C-T29-0 T29-1 T29-0 _lexicallyChainedTo surfaces,lettuce