BB-norm@ldeleger:BB-norm-12563490 / 105-1428 JSONTXT

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bionlp-ost-19-BB-norm-test

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9 83-90 Phenotype denotes coccoid
T10 91-110 Microorganism denotes Helicobacter pylori
T11 133-144 Habitat denotes BALB/c mice
T12 161-177 Habitat denotes intragastrically
T13 188-261 Habitat denotes broth culture (10(8)organisms/ml) of a coccoid H. pylori clinical isolate
T14 227-234 Phenotype denotes coccoid
T15 235-244 Microorganism denotes H. pylori
T16 245-253 Habitat denotes clinical
T17 267-274 Habitat denotes animals
T18 411-415 Habitat denotes mice
T20 437-451 Habitat denotes Brucella broth
T19 437-445 Microorganism denotes Brucella
T21 499-512 Habitat denotes control group
T22 514-518 Habitat denotes Mice
T23 594-601 Habitat denotes stomach
T24 606-614 Habitat denotes duodenum
T25 760-775 Habitat denotes reinfected mice
T26 797-820 Habitat denotes inflammatory infiltrate
T27 828-835 Habitat denotes stomach
T28 872-887 Habitat denotes lymphomonocytic
T29 898-910 Habitat denotes plasma cells
T30 915-926 Habitat denotes eosinophils
T31 971-983 Habitat denotes eosinophilic
T32-0 1016-1030 _FRAGMENT denotes lamina propria
T32-1 1045-1062 Habitat denotes of gastric corpus
T33 1035-1062 Habitat denotes submucosa of gastric corpus
T34 1048-1062 Habitat denotes gastric corpus
T2 0-1323 Paragraph denotes An experimental murine model was used to verify the viability and pathogenicity of coccoid Helicobacter pylori. For this purpose, 27 BALB/c mice were inoculated intragastrically with 1 ml broth culture (10(8)organisms/ml) of a coccoid H. pylori clinical isolate. The animals were divided into two groups. Nine were infected on a one-time basis (GA1) and 18 were infected on two consecutive days (GA2). Other 27 mice were inoculated with Brucella broth and divided in the same way; they composed the control group. Mice were killed at 2, 3, 7, 14 and 21 days post inoculation (pi). Fragments of stomach and duodenum were collected, fixed with 12% formalin and stained by hematoxilin-eosin and Giemsa for histopathological examination. Until the 14th()day, only reinfected mice had mild-to-moderate inflammatory infiltrate in the stomach. The infiltration was predominantly lymphomonocytic, although plasma cells and eosinophils could be seen. However, at 21st day, severe eosinophilic infiltration was present in the lamina propria and submucosa of gastric corpus. In subgroup GA1, animals presented lymphomonocytic infiltration in the stomach from 14th()day pi. Our results showed that coccoid H. pylori was able to induce an acute inflammatory response in stomach of reinfected mice since the initial periods of infection.
T7 3-28 Habitat denotes experimental murine model
T8 66-79 Phenotype denotes pathogenicity
T35 1081-1088 Habitat denotes animals
T36 1099-1114 Habitat denotes lymphomonocytic
T37 1135-1142 Habitat denotes stomach
T38 1186-1193 Phenotype denotes coccoid
T39 1194-1203 Microorganism denotes H. pylori
T40 1257-1283 Habitat denotes stomach of reinfected mice
T41 1268-1283 Habitat denotes reinfected mice
C-T32-0 T32-1 T32-0 _lexicallyChainedTo of gastric corpus,lamina propria