BB-norm+ner@ldeleger:BB-norm+ner-F-23224222-004 JSONTXT

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bionlp-ost-19-BB-norm-ner-train

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue NCBI_Taxonomy OntoBiotope
T1 18-31 Phenotype denotes Gram-positive OBT:000649
T2 32-46 Microorganism denotes Actinobacteria 1760
T3 52-73 Microorganism denotes Corynebacterium casei 160386
T4 81-93 Microorganism denotes C. variabile 1727
T5 142-161 Habitat denotes cheese from dairy A OBT:001480
T6 154-159 Habitat denotes dairy OBT:001988
T7 198-225 Microorganism denotes Brachybacterium alimentarum 47845
T8 235-249 Microorganism denotes Brevibacterium 1696
T9 276-303 Habitat denotes cheeses from the farmhouses OBT:001480
T10 293-303 Habitat denotes farmhouses OBT:000583
T11 305-312 Habitat denotes dairies OBT:001988
T12 326-337 Microorganism denotes B. permense 234834
T13 355-374 Habitat denotes cheese from dairy A OBT:001480
T14 367-372 Habitat denotes dairy OBT:001988
T15 376-385 Microorganism denotes B. linens 1703
T16 403-422 Habitat denotes cheese from dairy B OBT:001480
T17 415-420 Habitat denotes dairy OBT:001988
T18 427-441 Microorganism denotes B. aurantiacum 273384
T19 459-478 Habitat denotes cheese from dairy C OBT:001480
T20 471-476 Habitat denotes dairy OBT:001988
T21 480-500 Microorganism denotes Brevibacterium spp. 1696
T22 530-549 Habitat denotes cheese from dairy D OBT:001480
T23 542-547 Habitat denotes dairy OBT:001988
T24 577-595 Phenotype denotes coagulase negative OBT:000235
T25 596-609 Microorganism denotes staphylococci 1279
T26 628-656 Microorganism denotes Staphylococcus saprophyticus 29385
T28 664-686 Habitat denotes cheeses from dairies B OBT:001480
T27-0 664-684 _FRAGMENT denotes cheeses from dairies OBT:001480
T27-1 691-692 Habitat denotes D
T29 677-684 Habitat denotes dairies OBT:001988
T30 698-712 Microorganism denotes Staph. equorum 246432
T31 720-742 Habitat denotes cheeses from dairies C OBT:001480
T32-0 720-740 _FRAGMENT denotes cheeses from dairies OBT:001480
T32-1 747-748 Habitat denotes D
T33 733-740 Habitat denotes dairies OBT:001988
T34 771-784 Phenotype denotes Gram-negative OBT:000648
T35 812-828 Microorganism denotes Proteus vulgaris 585
T36 833-853 Microorganism denotes Alcaligenes faecalis 511
T37 871-890 Habitat denotes cheese from dairy C OBT:001480
T38 883-888 Habitat denotes dairy OBT:001988
T39 927-951 Habitat denotes surface yeast microbiota OBT:000113
T40 957-982 Habitat denotes yeast surface microbiota OBT:000113
T42 996-1013 Habitat denotes farmhouse cheeses OBT:001480
T41 996-1005 Habitat denotes farmhouse OBT:000583
T43 1060-1066 Habitat denotes cheese OBT:001480
T44 1083-1099 Habitat denotes industrial dairy OBT:001988
T45 1101-1106 Habitat denotes dairy OBT:001988
T46 1151-1170 Habitat denotes cheese from dairy A OBT:001480
T47 1163-1168 Habitat denotes dairy OBT:001988
T48 1197-1216 Microorganism denotes Yarrowia lipolytica 4952
T49 1221-1247 Microorganism denotes Scopulariopsis brevicaulis 561152
T50 1253-1269 Habitat denotes yeast microbiota OBT:000113
T51 1273-1292 Habitat denotes cheese from dairy B OBT:001480
T52 1285-1290 Habitat denotes dairy OBT:001988
T53 1320-1335 Microorganism denotes Geotrichum spp. 43987
T54 1346-1369 Microorganism denotes Kluyveromyces marxianus 4911
T55 1374-1395 Microorganism denotes Debaryomyces hansenii 4959
T56 1442-1461 Habitat denotes cheese from dairy C OBT:001480
T57 1454-1459 Habitat denotes dairy OBT:001988
T58 1479-1490 Microorganism denotes D. hansenii 4959
T59 1520-1536 Microorganism denotes Geothrichum spp. 43987
T60 1550-1569 Habitat denotes cheese from dairy D OBT:001480
T61 1562-1567 Habitat denotes dairy OBT:001988
T62 1596-1607 Microorganism denotes D. hansenii 4959
C-T27-0 T27-1 T27-0 _lexicallyChainedTo D,cheeses from dairies
C-T32-0 T32-1 T32-0 _lexicallyChainedTo D,cheeses from dairies