BB-norm+ner@ldeleger:BB-norm+ner-F-23224222-000 JSONTXT

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bionlp-ost-19-BB-norm-ner-train

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue NCBI_Taxonomy OntoBiotope
T1 18-67 Habitat denotes microbiota of four Danish surface-ripened cheeses OBT:000113
T2 37-67 Habitat denotes Danish surface-ripened cheeses OBT:003428
T3 87-97 Habitat denotes farmhouses OBT:000583
T4 106-122 Habitat denotes industrial dairy OBT:001988
T7 454-501 Habitat denotes cheese core microbiota of the farmhouse cheeses OBT:000113
T6 454-465 Habitat denotes cheese core OBT:000373
T5 454-460 Habitat denotes cheese OBT:003428
T9 484-501 Habitat denotes farmhouse cheeses OBT:003428
T8 484-493 Habitat denotes farmhouse OBT:000583
T10 520-530 Phenotype denotes mesophilic OBT:000343
T11 531-551 Phenotype denotes lactic acid bacteria OBT:000019
T12 553-556 Phenotype denotes LAB OBT:000019
T13 558-574 Habitat denotes starter cultures OBT:001030
T14 575-607 Microorganism denotes Lactococcus lactis subsp. lactis 1360
T15 612-637 Microorganism denotes Leuconostoc mesenteorides 1245
T16 653-660 Habitat denotes starter OBT:001030
T17 661-664 Phenotype denotes LAB OBT:000019
T18 685-703 Microorganism denotes Lactobacillus spp. 1578
T19 708-740 Habitat denotes cheese from the industrial dairy OBT:003428
T20 724-740 Habitat denotes industrial dairy OBT:001988
T21 777-790 Microorganism denotes Lb. paracasei 1597
T22 796-844 Habitat denotes surface bacterial microbiota of all four cheeses OBT:000113
T23 837-844 Habitat denotes cheeses OBT:003428
T24 863-883 Microorganism denotes Corynebacterium spp. 1716
T25 891-911 Microorganism denotes Brachybacterium spp. 43668
T26 912-931 Microorganism denotes Brevibacterium spp. 1696
T28 994-1011 Habitat denotes farmhouse cheeses OBT:003428
T27 994-1003 Habitat denotes farmhouse OBT:000583
T29 1020-1039 Microorganism denotes Brevibacterium spp. 1696
T30 1057-1089 Habitat denotes cheese from the industrial dairy OBT:003428
T31 1073-1089 Habitat denotes industrial dairy OBT:001988
T32 1103-1112 Microorganism denotes B. linens 1703
T33 1125-1149 Habitat denotes surface-ripening culture OBT:001030
T34 1161-1174 Phenotype denotes Gram-negative OBT:000648
T35 1198-1217 Microorganism denotes Alcalignes faecalis 511
T36 1222-1238 Microorganism denotes Proteus vulgaris 585
T38 1265-1282 Habitat denotes farmhouse cheeses OBT:003428
T37 1265-1274 Habitat denotes farmhouse OBT:000583
T39 1288-1313 Habitat denotes surface yeast microbiota OBT:000113
T40 1370-1376 Habitat denotes cheese OBT:003428
T41 1386-1403 Habitat denotes farmhouse cheeses OBT:003428
T42 1386-1395 Habitat denotes farmhouse OBT:000583
T43 1437-1456 Microorganism denotes Yarrowia lipolytica 4952
T44 1458-1473 Microorganism denotes Geotrichum spp. 43987
T45 1478-1499 Microorganism denotes Debaryomyces hansenii 4959
T46 1527-1559 Habitat denotes cheese from the industrial dairy OBT:003428
T47 1543-1559 Habitat denotes industrial dairy OBT:001988
T48 1561-1572 Microorganism denotes D. hansenii 4959
T49 1689-1715 Microorganism denotes Streptococcus thermophilus 1308
T51 1735-1760 Habitat denotes farmhouse raw milk cheese OBT:003428
T50 1735-1744 Habitat denotes farmhouse OBT:000583
T52 1745-1753 Habitat denotes raw milk OBT:001276
T53 1826-1848 Microorganism denotes Vagococcus carniphilus 218144
T54 1850-1868 Microorganism denotes Psychrobacter spp. 497
T55 1873-1885 Microorganism denotes Lb. curvatus 28038
T56 1893-1908 Habitat denotes cheese surfaces OBT:001341
T57 1893-1899 Habitat denotes cheese OBT:003428
T58 1967-1973 Habitat denotes cheese OBT:001480