BB-norm+ner@ldeleger:BB-norm+ner-25098305 / 136-1742 JSONTXT

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bionlp-ost-19-BB-norm-ner-train

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Id Subject Object Predicate Lexical cue NCBI_Taxonomy OntoBiotope
T2 0-1606 Paragraph denotes Abstract Upper respiratory tract disease (URTD) in the gopher tortoise (Gopherus polyphemus) is highly contagious and has been implicated in the reduction of populations throughout the range. With the exception of a few limited studies, the prevalence of URTD in Georgia, USA tortoise populations is poorly known. We found that exposure to Mycoplasma agassizii and Mycoplasma testudineum, associated with URTD, varied geographically among 11 Georgia tortoise populations. The prevalence of antibodies to M. agassizii in individual populations was either very low (0-3%, n=7 populations) or very high (96-100%, n=4 populations), whereas there was variation in the prevalence of antibodies to M. testudineum among populations (20-61%, n=10) with only one site being negative. Five sites had tortoises with antibodies to both pathogens, and these were the only sites where we observed tortoises with clinical signs consistent with URTD. We did not find tortoises with clinical signs of URTD at sites with tortoises with antibodies only to M. testudineum, which provides evidence that this organism may be of limited pathogenicity for gopher tortoises. Collectively, these data indicate that both M. agassizii and M. testudineum are present in Georgia populations of gopher tortoises and that clinical disease is apparent in populations where both pathogens are present. Additional research is needed to better understand the role of these two pathogens, and other potential pathogens, in the overall health of tortoise populations, especially if future conservation efforts involve translocation of tortoises.
T7 9-32 Habitat denotes Upper respiratory tract OBT:000936
T8 55-70 Habitat denotes gopher tortoise OBT:001828
T9 72-91 Habitat denotes Gopherus polyphemus OBT:001828
T10 263-296 Habitat denotes Georgia, USA tortoise populations OBT:001828
T11 340-360 Microorganism denotes Mycoplasma agassizii 33922
T12 365-387 Microorganism denotes Mycoplasma testudineum 244584
T13 442-470 Habitat denotes Georgia tortoise populations OBT:001828
T14 504-516 Microorganism denotes M. agassizii 33922
T15 691-705 Microorganism denotes M. testudineum 244584
T16 789-798 Habitat denotes tortoises OBT:001828
T17 823-832 Phenotype denotes pathogens OBT:002669
T18 882-891 Habitat denotes tortoises OBT:001828
T19 950-959 Habitat denotes tortoises OBT:001828
T20 1002-1011 Habitat denotes tortoises OBT:001828
T21 1036-1050 Microorganism denotes M. testudineum 244584
T22 1113-1126 Phenotype denotes pathogenicity OBT:002669
T23 1131-1147 Habitat denotes gopher tortoises OBT:001828
T24 1193-1205 Microorganism denotes M. agassizii 33922
T25 1210-1224 Microorganism denotes M. testudineum 244584
T26 1240-1279 Habitat denotes Georgia populations of gopher tortoises OBT:001828
T27 1344-1353 Phenotype denotes pathogens OBT:002669
T28 1440-1449 Phenotype denotes pathogens OBT:002669
T29 1471-1480 Phenotype denotes pathogens OBT:002669
T30 1507-1527 Habitat denotes tortoise populations OBT:001828
T31 1596-1605 Habitat denotes tortoises OBT:001828