BB-norm+ner@ldeleger:BB-norm+ner-23855904 / 160-837
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bionlp-ost-19-BB-norm-ner-train
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue | NCBI_Taxonomy | OntoBiotope |
|---|---|---|---|---|---|---|
| T2 | 0-677 | Paragraph | denotes | Antimicrobial resistance is increasing among clinical Campylobacter cases and is common among isolates from other sources, specifically retail poultry - a major source of human infection. In this study the antimicrobial susceptibility of isolates from a UK-wide survey of Campylobacter in retail poultry in 2001 and 2004-5 was investigated. The occurrence of phenotypes resistant to tetracycline, quinolones (ciprofloxacin and naladixic acid), erythromycin, chloramphenicol and aminoglycosides was quantified. This was compared with a phylogeny for these isolates based upon Multi Locus Sequence Typing (MLST) to investigate the pattern of antimicrobial resistance acquisition. | ||
| T9 | 0-24 | Phenotype | denotes | Antimicrobial resistance | OBT:002337 | |
| T10 | 45-53 | Habitat | denotes | clinical | OBT:003220 | |
| T11 | 54-67 | Microorganism | denotes | Campylobacter | 194 | |
| T12 | 136-150 | Habitat | denotes | retail poultry | OBT:002199 | |
| T13 | 171-176 | Habitat | denotes | human | OBT:002488 | |
| T14 | 206-234 | Phenotype | denotes | antimicrobial susceptibility | OBT:002338 | |
| T15 | 272-285 | Microorganism | denotes | Campylobacter | 194 | |
| T16 | 289-303 | Habitat | denotes | retail poultry | OBT:002199 | |
| T23 | 370-395 | Phenotype | denotes | resistant to tetracycline | OBT:002869 | |
| T19-0 | 370-382 | _FRAGMENT | denotes | resistant to | OBT:002840 | |
| T19-1 | 397-407 | Phenotype | denotes | quinolones | ||
| T22-0 | 370-382 | _FRAGMENT | denotes | resistant to | OBT:002773 | |
| T22-1 | 409-422 | Phenotype | denotes | ciprofloxacin | ||
| T20-0 | 370-382 | _FRAGMENT | denotes | resistant to | OBT:002823 | |
| T20-1 | 427-441 | Phenotype | denotes | naladixic acid | ||
| T17-0 | 370-382 | _FRAGMENT | denotes | resistant to | OBT:002790 | |
| T17-1 | 444-456 | Phenotype | denotes | erythromycin | ||
| T18-0 | 370-382 | _FRAGMENT | denotes | resistant to | OBT:002772 | |
| T18-1 | 458-473 | Phenotype | denotes | chloramphenicol | ||
| T21-0 | 370-382 | _FRAGMENT | denotes | resistant to | OBT:002760 | |
| T21-1 | 478-493 | Phenotype | denotes | aminoglycosides | ||
| T24 | 640-664 | Phenotype | denotes | antimicrobial resistance | OBT:002337 | |
| C-T19-0 | T19-1 | T19-0 | _lexicallyChainedTo | quinolones,resistant to | ||
| C-T22-0 | T22-1 | T22-0 | _lexicallyChainedTo | ciprofloxacin,resistant to | ||
| C-T20-0 | T20-1 | T20-0 | _lexicallyChainedTo | naladixic acid,resistant to | ||
| C-T17-0 | T17-1 | T17-0 | _lexicallyChainedTo | erythromycin,resistant to | ||
| C-T18-0 | T18-1 | T18-0 | _lexicallyChainedTo | chloramphenicol,resistant to | ||
| C-T21-0 | T21-1 | T21-0 | _lexicallyChainedTo | aminoglycosides,resistant to |