BB-norm+ner@ldeleger:BB-norm+ner-12781527 JSONTXT

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bionlp-ost-19-BB-norm-ner-train

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue NCBI_Taxonomy OntoBiotope
T1 0-59 Title denotes Campylobacter--a tale of two protein glycosylation systems.
T2 60-926 Paragraph denotes Post-translational glycosylation is a universal modification of proteins in eukarya, archaea and bacteria. Two recent publications describe the first confirmed report of a bacterial N-linked glycosylation pathway in the human gastrointestinal pathogen Campylobacter jejuni. In addition, an O-linked glycosylation pathway has been identified and characterized in C. jejuni and the related species Campylobacter coli. Both pathways have similarity to the respective N- and O-linked glycosylation processes in eukaryotes. In bacteria, homologues of the genes in both pathways are found in other organisms, the complex glycans linked to the glycoproteins share common biosynthetic precursors and these modifications could play similar biological roles. Thus, Campylobacter provides a unique model system for the elucidation and exploitation of glycoprotein biosynthesis.
T3 0-13 Microorganism denotes Campylobacter 194
T4 280-311 Phenotype denotes human gastrointestinal pathogen OBT:002806
T6 280-302 Habitat denotes human gastrointestinal OBT:000641
T5 280-285 Habitat denotes human OBT:002488
T7 312-332 Microorganism denotes Campylobacter jejuni 197
T8 422-431 Microorganism denotes C. jejuni 197
T9 456-474 Microorganism denotes Campylobacter coli 195
T10 815-828 Microorganism denotes Campylobacter 194