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BB-kb@ldeleger:BB-kb-8607503 JSONTXT

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bionlp-ost-19-BB-kb-train

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue NCBI_Taxonomy OntoBiotope
T1 0-107 Title denotes Non-O1 Vibrio cholerae bacteremia in patients with cirrhosis: 5-yr experience from a single medical center.
T6 0-22 Microorganism denotes Non-O1 Vibrio cholerae 66861
T7 37-60 Habitat denotes patients with cirrhosis OBT:003269
T8 92-106 Habitat denotes medical center OBT:002518
T2 108-300 Paragraph denotes To assess the clinical features and susceptibility of cirrhotic patients to non-O1 Vibrio cholerae bacteremia and to provide our therapeutic experiences in this rare and high lethal infection.
T9 162-180 Habitat denotes cirrhotic patients OBT:003220
T10 184-206 Microorganism denotes non-O1 Vibrio cholerae 66861
T3 301-547 Paragraph denotes Twenty-eight blood culture isolates of non-O1 V. cholerae were identified by our clinical microbiology laboratory between July 1989 and June 1994. Patients with underlying cirrhosis and the aforementioned bacteremia were retrospectively reviewed.
T12 314-327 Habitat denotes blood culture OBT:000007
T11 314-319 Habitat denotes blood OBT:000521
T13 340-358 Microorganism denotes non-O1 V. cholerae 66861
T14 382-414 Habitat denotes clinical microbiology laboratory OBT:001169|OBT:000011
T15 448-516 Habitat denotes Patients with underlying cirrhosis and the aforementioned bacteremia OBT:003269
T4 548-1414 Paragraph denotes Twenty-one cirrhotic patients (16 male, five female; mean age, 50.9 yr; range 28-67 yr) were identified and classified as Child B (6 cases) and Child C (15 cases). Bacteremic episodes occurred most often from March to September. Seafood ingestion (seven cases) and seawater exposure (two cases) were risk factors, but nosocomial infections were also noted in six cases. Presenting symptoms and signs included ascites (95.2%), fever (81%), abdominal pain (52.4%), diarrhea (33.3%), and cellulitis with bullae formation (19%). Concurrent spontaneous bacterial peritonitis was determined in 10 cases, seven with positive ascites cultures. Antibiotic therapy (either cephalothin with gentamicin or ceftriaxone alone) cured most of the bacteremic episodes. The overall case-fatality rate was 23.8%, but 75% of the deaths were observed in patients with skin manifestation.
T16 559-635 Habitat denotes cirrhotic patients (16 male, five female; mean age, 50.9 yr; range 28-67 yr) OBT:003269
T17 670-677 Habitat denotes Child B OBT:003269
T18 692-699 Habitat denotes Child C OBT:003269
T19 777-784 Habitat denotes Seafood OBT:001301
T20 813-821 Habitat denotes seawater OBT:003105
T21 866-876 Habitat denotes nosocomial OBT:000011
T22 957-964 Habitat denotes ascites OBT:000799
T23 987-996 Habitat denotes abdominal OBT:000175
T24 1166-1173 Habitat denotes ascites OBT:000799
T25 1381-1413 Habitat denotes patients with skin manifestation OBT:003269
T26 1395-1399 Habitat denotes skin OBT:000875
T5 1415-1668 Paragraph denotes Patients with decompensated cirrhosis are susceptible to non-O1 V. cholerae bacteremia and should not ingest raw seafood or expose skin wounds to salt water. A high index of suspicion and early administration of antibiotics may lower the mortality rate.
T27 1415-1452 Habitat denotes Patients with decompensated cirrhosis OBT:003220
T28 1472-1490 Microorganism denotes non-O1 V. cholerae 66861
T29 1524-1535 Habitat denotes raw seafood OBT:001277
T30 1546-1557 Habitat denotes skin wounds OBT:003231
T31 1546-1550 Habitat denotes skin OBT:000875
T32 1561-1571 Habitat denotes salt water OBT:002592
E1 0-22 Lives_In denotes Non-O1 Vibrio cholerae
E2 340-358 Lives_In denotes non-O1 V. cholerae
E3 340-358 Lives_In denotes non-O1 V. cholerae
E4 340-358 Lives_In denotes non-O1 V. cholerae
E5 1472-1490 Lives_In denotes non-O1 V. cholerae
R8 E4 T15 Location non-O1 V. cholerae,Patients with underlying cirrhosis and the aforementioned bacteremia
R1 E1 T6 Microorganism Non-O1 Vibrio cholerae,Non-O1 Vibrio cholerae
R2 E1 T7 Location Non-O1 Vibrio cholerae,patients with cirrhosis
R3 E2 T13 Microorganism non-O1 V. cholerae,non-O1 V. cholerae
R4 E2 T12 Location non-O1 V. cholerae,blood culture
R5 E3 T13 Microorganism non-O1 V. cholerae,non-O1 V. cholerae
R6 E3 T11 Location non-O1 V. cholerae,blood
R7 E4 T13 Microorganism non-O1 V. cholerae,non-O1 V. cholerae
R9 E5 T28 Microorganism non-O1 V. cholerae,non-O1 V. cholerae
R10 E5 T27 Location non-O1 V. cholerae,Patients with decompensated cirrhosis