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bionlp-ost-19-BB-kb-train

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Id Subject Object Predicate Lexical cue NCBI_Taxonomy OntoBiotope
T1 0-135 Title denotes Surveillance for upper respiratory tract disease and Mycoplasma in free-ranging gopher tortoises (Gopherus polyphemus) in Georgia, USA.
T3 17-40 Habitat denotes upper respiratory tract OBT:000936
T4 53-63 Microorganism denotes Mycoplasma 2093
T5 67-96 Habitat denotes free-ranging gopher tortoises OBT:001828
T6 98-117 Habitat denotes Gopherus polyphemus OBT:001828
T2 136-1742 Paragraph denotes Abstract Upper respiratory tract disease (URTD) in the gopher tortoise (Gopherus polyphemus) is highly contagious and has been implicated in the reduction of populations throughout the range. With the exception of a few limited studies, the prevalence of URTD in Georgia, USA tortoise populations is poorly known. We found that exposure to Mycoplasma agassizii and Mycoplasma testudineum, associated with URTD, varied geographically among 11 Georgia tortoise populations. The prevalence of antibodies to M. agassizii in individual populations was either very low (0-3%, n=7 populations) or very high (96-100%, n=4 populations), whereas there was variation in the prevalence of antibodies to M. testudineum among populations (20-61%, n=10) with only one site being negative. Five sites had tortoises with antibodies to both pathogens, and these were the only sites where we observed tortoises with clinical signs consistent with URTD. We did not find tortoises with clinical signs of URTD at sites with tortoises with antibodies only to M. testudineum, which provides evidence that this organism may be of limited pathogenicity for gopher tortoises. Collectively, these data indicate that both M. agassizii and M. testudineum are present in Georgia populations of gopher tortoises and that clinical disease is apparent in populations where both pathogens are present. Additional research is needed to better understand the role of these two pathogens, and other potential pathogens, in the overall health of tortoise populations, especially if future conservation efforts involve translocation of tortoises.
T7 145-168 Habitat denotes Upper respiratory tract OBT:000936
T8 191-206 Habitat denotes gopher tortoise OBT:001828
T9 208-227 Habitat denotes Gopherus polyphemus OBT:001828
T10 399-432 Habitat denotes Georgia, USA tortoise populations OBT:001828
T11 476-496 Microorganism denotes Mycoplasma agassizii 33922
T12 501-523 Microorganism denotes Mycoplasma testudineum 244584
T13 578-606 Habitat denotes Georgia tortoise populations OBT:001828
T14 640-652 Microorganism denotes M. agassizii 33922
T15 827-841 Microorganism denotes M. testudineum 244584
T16 925-934 Habitat denotes tortoises OBT:001828
T17 959-968 Phenotype denotes pathogens OBT:002669
T18 1018-1027 Habitat denotes tortoises OBT:001828
T19 1086-1095 Habitat denotes tortoises OBT:001828
T20 1138-1147 Habitat denotes tortoises OBT:001828
T21 1172-1186 Microorganism denotes M. testudineum 244584
T22 1249-1262 Phenotype denotes pathogenicity OBT:002669
T23 1267-1283 Habitat denotes gopher tortoises OBT:001828
T24 1329-1341 Microorganism denotes M. agassizii 33922
T25 1346-1360 Microorganism denotes M. testudineum 244584
T26 1376-1415 Habitat denotes Georgia populations of gopher tortoises OBT:001828
T27 1480-1489 Phenotype denotes pathogens OBT:002669
T28 1576-1585 Phenotype denotes pathogens OBT:002669
T29 1607-1616 Phenotype denotes pathogens OBT:002669
T30 1643-1663 Habitat denotes tortoise populations OBT:001828
T31 1732-1741 Habitat denotes tortoises OBT:001828
E1 53-63 Lives_In denotes Mycoplasma
E3 53-63 Lives_In denotes Mycoplasma
E5 476-496 Lives_In denotes Mycoplasma agassizii
E7 501-523 Lives_In denotes Mycoplasma testudineum
E9 640-652 Exhibits denotes M. agassizii
E10 827-841 Exhibits denotes M. testudineum
E11 1172-1186 Exhibits denotes M. testudineum
E14 1329-1341 Lives_In denotes M. agassizii
E12 1329-1341 Exhibits denotes M. agassizii
E13 1329-1341 Exhibits denotes M. agassizii
E19 1346-1360 Lives_In denotes M. testudineum
E16 1346-1360 Exhibits denotes M. testudineum
E17 1346-1360 Exhibits denotes M. testudineum
R1 E1 T4 Microorganism Mycoplasma,Mycoplasma
R2 E1 T6 Location Mycoplasma,Gopherus polyphemus
R3 E3 T4 Microorganism Mycoplasma,Mycoplasma
R4 E3 T5 Location Mycoplasma,free-ranging gopher tortoises
R5 E5 T11 Microorganism Mycoplasma agassizii,Mycoplasma agassizii
R6 E5 T13 Location Mycoplasma agassizii,Georgia tortoise populations
R7 E7 T12 Microorganism Mycoplasma testudineum,Mycoplasma testudineum
R8 E7 T13 Location Mycoplasma testudineum,Georgia tortoise populations
R9 E9 T14 Microorganism M. agassizii,M. agassizii
R10 E9 T17 Property M. agassizii,pathogens
R11 E10 T15 Microorganism M. testudineum,M. testudineum
R12 E10 T17 Property M. testudineum,pathogens
R13 E11 T21 Microorganism M. testudineum,M. testudineum
R14 E11 T22 Property M. testudineum,pathogenicity
R15 E14 T24 Microorganism M. agassizii,M. agassizii
R16 E14 T26 Location M. agassizii,Georgia populations of gopher tortoises
R17 E12 T24 Microorganism M. agassizii,M. agassizii
R18 E12 T28 Property M. agassizii,pathogens
R19 E13 T24 Microorganism M. agassizii,M. agassizii
R20 E13 T27 Property M. agassizii,pathogens
R21 E19 T25 Microorganism M. testudineum,M. testudineum
R22 E19 T26 Location M. testudineum,Georgia populations of gopher tortoises
R23 E16 T25 Microorganism M. testudineum,M. testudineum
R24 E16 T27 Property M. testudineum,pathogens
R25 E17 T25 Microorganism M. testudineum,M. testudineum
R26 E17 T28 Property M. testudineum,pathogens