BB-kb+ner@ldeleger:BB-kb+ner-F-23224222-002 JSONTXT

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bionlp-ost-19-BB-kb-ner-train

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue NCBI_Taxonomy OntoBiotope
T1 54-75 Microorganism denotes Debaryomyces hansenii 4959
T2 80-97 Habitat denotes semi-soft cheeses OBT:003458
T3 115-134 Microorganism denotes Geotrichum candidum 1173061
T4 139-151 Habitat denotes soft cheeses OBT:003459
T5 157-175 Phenotype denotes coagulase-negative OBT:000235
T6 176-189 Microorganism denotes staphylococci 1279
T7 191-213 Microorganism denotes Staphylococcus equorum 246432
T8 251-262 Microorganism denotes D. hansenii 4959
T9 268-281 Microorganism denotes staphylococci 1279
T11 285-299 Habitat denotes cheese surface OBT:001341
T10 285-291 Habitat denotes cheese OBT:001480
T12 335-347 Habitat denotes cheese brine OBT:001944
T13 335-341 Habitat denotes cheese OBT:001480
T14 445-456 Microorganism denotes D. hansenii 4959
T15 506-517 Microorganism denotes D. hansenii 4959
T16 529-561 Habitat denotes cheeses of the Danish Danbo type OBT:003458
T17 596-612 Habitat denotes ripening culture OBT:001030
T18 627-648 Habitat denotes dairy housemicrobiota OBT:000113
T19 665-678 Habitat denotes ripening room OBT:003301
T20 680-691 Microorganism denotes D. hansenii 4959
T21 713-719 Habitat denotes cheese OBT:001480
T22 835-849 Habitat denotes cheese surface OBT:001341
T23 835-841 Habitat denotes cheese OBT:001480
T24 897-931 Habitat denotes acid tolerant bacterial microbiota OBT:000113
T25 897-910 Phenotype denotes acid tolerant OBT:002883
T26 943-956 Phenotype denotes Gram-positive OBT:000649
T27 957-968 Microorganism denotes coryneforms 1653
T28 970-989 Microorganism denotes Brevibacterium spp. 1696
T29 991-1011 Microorganism denotes Corynebacterium spp. 1716
T30 1016-1035 Microorganism denotes Microbacterium spp. 33882
T31 1090-1103 Phenotype denotes Gram-positive OBT:000649
T32 1104-1128 Microorganism denotes Marinilactibacillus spp. 191769
T33 1133-1146 Phenotype denotes Gram-negative OBT:000648
T34 1147-1161 Microorganism denotes Halomonas spp. 2745
T35 1163-1174 Microorganism denotes Vibrio spp. 662
T36 1179-1191 Microorganism denotes Proteus spp. 583
T37 1213-1231 Microorganism denotes Enterobacteriaceae 543
T39 1270-1285 Habitat denotes cheese surfaces OBT:001341
T38 1270-1276 Habitat denotes cheese OBT:001480
T40 1333-1346 Phenotype denotes Gram-negative OBT:000648
T41 1488-1494 Habitat denotes cheese OBT:001480
T42 1558-1564 Habitat denotes cheese OBT:001480
E1 54-75 Lives_In denotes Debaryomyces hansenii
E2 54-75 Lives_In denotes Debaryomyces hansenii
E3 115-134 Lives_In denotes Geotrichum candidum
E4 176-189 Lives_In denotes staphylococci
E5 176-189 Lives_In denotes staphylococci
E6 176-189 Exhibits denotes staphylococci
E7 251-262 Lives_In denotes D. hansenii
E8 251-262 Lives_In denotes D. hansenii
E9 268-281 Lives_In denotes staphylococci
E10 268-281 Lives_In denotes staphylococci
E11 506-517 Lives_In denotes D. hansenii
E12 506-517 Lives_In denotes D. hansenii
E13 506-517 Lives_In denotes D. hansenii
E14 680-691 Lives_In denotes D. hansenii
E15 680-691 Lives_In denotes D. hansenii
E16 957-968 Lives_In denotes coryneforms
E17 957-968 Exhibits denotes coryneforms
E18 970-989 Lives_In denotes Brevibacterium spp.
E19 970-989 Lives_In denotes Brevibacterium spp.
E20 970-989 Exhibits denotes Brevibacterium spp.
E21 970-989 Exhibits denotes Brevibacterium spp.
E22 991-1011 Lives_In denotes Corynebacterium spp.
E23 991-1011 Lives_In denotes Corynebacterium spp.
E24 991-1011 Exhibits denotes Corynebacterium spp.
E25 991-1011 Exhibits denotes Corynebacterium spp.
E26 1016-1035 Lives_In denotes Microbacterium spp.
E27 1016-1035 Lives_In denotes Microbacterium spp.
E28 1016-1035 Exhibits denotes Microbacterium spp.
E29 1016-1035 Exhibits denotes Microbacterium spp.
E30 1104-1128 Lives_In denotes Marinilactibacillus spp.
E31 1104-1128 Exhibits denotes Marinilactibacillus spp.
E32 1147-1161 Lives_In denotes Halomonas spp.
E33 1147-1161 Lives_In denotes Halomonas spp.
E34 1147-1161 Lives_In denotes Halomonas spp.
E35 1147-1161 Exhibits denotes Halomonas spp.
E36 1163-1174 Lives_In denotes Vibrio spp.
E37 1163-1174 Lives_In denotes Vibrio spp.
E38 1163-1174 Lives_In denotes Vibrio spp.
E39 1163-1174 Exhibits denotes Vibrio spp.
E40 1179-1191 Lives_In denotes Proteus spp.
E41 1179-1191 Lives_In denotes Proteus spp.
E42 1179-1191 Lives_In denotes Proteus spp.
E43 1179-1191 Exhibits denotes Proteus spp.
E44 1213-1231 Lives_In denotes Enterobacteriaceae
E45 1213-1231 Lives_In denotes Enterobacteriaceae
E46 1213-1231 Lives_In denotes Enterobacteriaceae
R1 E1 T1 Microorganism Debaryomyces hansenii,Debaryomyces hansenii
R2 E1 T2 Location Debaryomyces hansenii,semi-soft cheeses
R3 E2 T1 Microorganism Debaryomyces hansenii,Debaryomyces hansenii
R4 E2 T4 Location Debaryomyces hansenii,soft cheeses
R5 E3 T3 Microorganism Geotrichum candidum,Geotrichum candidum
R6 E3 T4 Location Geotrichum candidum,soft cheeses
R7 E4 T6 Microorganism staphylococci,staphylococci
R8 E4 T2 Location staphylococci,semi-soft cheeses
R9 E5 T6 Microorganism staphylococci,staphylococci
R10 E5 T4 Location staphylococci,soft cheeses
R11 E6 T6 Microorganism staphylococci,staphylococci
R12 E6 T5 Property staphylococci,coagulase-negative
R13 E7 T8 Microorganism D. hansenii,D. hansenii
R14 E7 T12 Location D. hansenii,cheese brine
R15 E8 T8 Microorganism D. hansenii,D. hansenii
R16 E8 T11 Location D. hansenii,cheese surface
R17 E9 T9 Microorganism staphylococci,staphylococci
R18 E9 T12 Location staphylococci,cheese brine
R19 E10 T9 Microorganism staphylococci,staphylococci
R20 E10 T11 Location staphylococci,cheese surface
R21 E11 T15 Microorganism D. hansenii,D. hansenii
R22 E11 T18 Location D. hansenii,dairy housemicrobiota
R23 E12 T15 Microorganism D. hansenii,D. hansenii
R24 E12 T16 Location D. hansenii,cheeses of the Danish Danbo type
R25 E13 T15 Microorganism D. hansenii,D. hansenii
R26 E13 T19 Location D. hansenii,ripening room
R27 E14 T20 Microorganism D. hansenii,D. hansenii
R28 E14 T21 Location D. hansenii,cheese
R29 E15 T20 Microorganism D. hansenii,D. hansenii
R30 E15 T22 Location D. hansenii,cheese surface
R31 E16 T27 Microorganism coryneforms,coryneforms
R32 E16 T22 Location coryneforms,cheese surface
R33 E17 T27 Microorganism coryneforms,coryneforms
R34 E17 T26 Property coryneforms,Gram-positive
R35 E18 T28 Microorganism Brevibacterium spp.,Brevibacterium spp.
R36 E18 T22 Location Brevibacterium spp.,cheese surface
R37 E19 T28 Microorganism Brevibacterium spp.,Brevibacterium spp.
R38 E19 T24 Location Brevibacterium spp.,acid tolerant bacterial microbiota
R39 E20 T28 Microorganism Brevibacterium spp.,Brevibacterium spp.
R40 E20 T25 Property Brevibacterium spp.,acid tolerant
R41 E21 T28 Microorganism Brevibacterium spp.,Brevibacterium spp.
R42 E21 T26 Property Brevibacterium spp.,Gram-positive
R43 E22 T29 Microorganism Corynebacterium spp.,Corynebacterium spp.
R44 E22 T24 Location Corynebacterium spp.,acid tolerant bacterial microbiota
R45 E23 T29 Microorganism Corynebacterium spp.,Corynebacterium spp.
R46 E23 T22 Location Corynebacterium spp.,cheese surface
R47 E24 T29 Microorganism Corynebacterium spp.,Corynebacterium spp.
R48 E24 T26 Property Corynebacterium spp.,Gram-positive
R49 E25 T29 Microorganism Corynebacterium spp.,Corynebacterium spp.
R50 E25 T25 Property Corynebacterium spp.,acid tolerant
R51 E26 T30 Microorganism Microbacterium spp.,Microbacterium spp.
R52 E26 T22 Location Microbacterium spp.,cheese surface
R53 E27 T30 Microorganism Microbacterium spp.,Microbacterium spp.
R54 E27 T24 Location Microbacterium spp.,acid tolerant bacterial microbiota
R55 E28 T30 Microorganism Microbacterium spp.,Microbacterium spp.
R56 E28 T26 Property Microbacterium spp.,Gram-positive
R57 E29 T30 Microorganism Microbacterium spp.,Microbacterium spp.
R58 E29 T25 Property Microbacterium spp.,acid tolerant
R59 E30 T32 Microorganism Marinilactibacillus spp.,Marinilactibacillus spp.
R60 E30 T39 Location Marinilactibacillus spp.,cheese surfaces
R61 E31 T32 Microorganism Marinilactibacillus spp.,Marinilactibacillus spp.
R62 E31 T31 Property Marinilactibacillus spp.,Gram-positive
R63 E32 T34 Microorganism Halomonas spp.,Halomonas spp.
R64 E32 T42 Location Halomonas spp.,cheese
R65 E33 T34 Microorganism Halomonas spp.,Halomonas spp.
R66 E33 T39 Location Halomonas spp.,cheese surfaces
R67 E34 T34 Microorganism Halomonas spp.,Halomonas spp.
R68 E34 T41 Location Halomonas spp.,cheese
R69 E35 T34 Microorganism Halomonas spp.,Halomonas spp.
R70 E35 T33 Property Halomonas spp.,Gram-negative
R71 E36 T35 Microorganism Vibrio spp.,Vibrio spp.
R72 E36 T39 Location Vibrio spp.,cheese surfaces
R73 E37 T35 Microorganism Vibrio spp.,Vibrio spp.
R74 E37 T42 Location Vibrio spp.,cheese
R75 E38 T35 Microorganism Vibrio spp.,Vibrio spp.
R76 E38 T41 Location Vibrio spp.,cheese
R77 E39 T35 Microorganism Vibrio spp.,Vibrio spp.
R78 E39 T33 Property Vibrio spp.,Gram-negative
R79 E40 T36 Microorganism Proteus spp.,Proteus spp.
R80 E40 T41 Location Proteus spp.,cheese
R81 E41 T36 Microorganism Proteus spp.,Proteus spp.
R82 E41 T42 Location Proteus spp.,cheese
R83 E42 T36 Microorganism Proteus spp.,Proteus spp.
R84 E42 T39 Location Proteus spp.,cheese surfaces
R85 E43 T36 Microorganism Proteus spp.,Proteus spp.
R86 E43 T33 Property Proteus spp.,Gram-negative
R87 E44 T37 Microorganism Enterobacteriaceae,Enterobacteriaceae
R88 E44 T41 Location Enterobacteriaceae,cheese
R89 E45 T37 Microorganism Enterobacteriaceae,Enterobacteriaceae
R90 E45 T42 Location Enterobacteriaceae,cheese
R91 E46 T37 Microorganism Enterobacteriaceae,Enterobacteriaceae
R92 E46 T39 Location Enterobacteriaceae,cheese surfaces