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NameTDescription# Ann.AuthorMaintainerUpdated_at Status

401-420 / 556 show all
GlycoConjugate-collection The PubMed entries (titles and abstracts) from the journal of GlycoConjugate0Jin-Dong Kim2023-11-28Developing
Colil Colil (Comments on Literature in Literature) is a search service for citation contexts utilized in the biomedical domain. Colil searches for a cited paper in the Colil database and then returns a list of the citation contexts for it and its relevant papers based on co-citations.3.34 KDBCLSToyofumi Fujiwara2023-11-28Testing
PMC-KEGG Documents from PMC including the word KEGG, with names of software tools and databases marked. 27yucca2023-11-28Developing
PT_NER_NEL_CONSENSUS 354dpavot2023-11-27
bionlp-ost-19-BB-norm-ner-dev 1.33 Kldeleger2023-11-27Developing
LitCovid-sample-PD-MONDO 1.21 KJin-Dong Kim2023-11-27Developing
CORD-19-sample-sentences 161Jin-Dong Kim2023-11-27Developing
CORD-19-sample-HP 39Jin-Dong Kim2023-11-27Developing
CHEMDNER-training-test The training subset of the CHEMDNER corpus29.4 KMartin Krallinger et al.Jin-Dong Kim2023-11-27Testing
GlycoBiology-PACDB cGGDB-based annotation to GlycoBiology abstracts3.03 KToshihide Shikanaishikanai2023-11-27Testing
CORD-PICO Automatic annotation of the CORD-19 dataset with PICO categories. The corpus was automatically labeled with an LSTM-CRF model trained on human-annotated PubMed abstracts from https://github.com/bepnye/EBM-NLP. Currently, titles and abstracts only are annotated using Population, Intervention and Outcome labels, as well as more fine-grained labels such as Age, Drug, Mortality and others.69.6 KSimon Susterssuster2023-11-27Developing
pubtator-sample Sample annotation of PubTator produced by Zhiyong Lu et al.28Zhiyong LuJin-Dong Kim2023-11-27Testing
tagtog-demo demo documents produced by tagtog annotations262tagtog2023-11-27Developing
CellFinder CellFinder corpus4.75 KMariana Neves, Alexander Damaschun, Andreas Kurtz, Ulf LeserMariana Neves2023-11-27Released
med-device 434laurenc2023-11-27Developing
taxonomy 10rdmpage2023-11-27Testing
123123123 123123123150yaoxinzhi2023-11-27Released
performance-test a project for performance test480 KJin-Dong Kim2023-11-27Testing
disease_gene_microbe_small Small version (48 abstract that mention both Crohns and S. aureus) for development purposes Abbreviation: dgm Content: annotated abstracts on Crohn’s disease or on on Staphylococcus aureus (according to the jensenlab.org indexing resources) Entity types: (three for a start, organisms (NCBI Taxonomy taxa), disease (Disease Ontology terms), human genes (ENSEMBL proteins) Aim: Explore indirect associations of diseases to microbial species in this corpus via gene co-mentions536evangelos2023-11-27Testing
Glycobiology-GlycanName 946Toshihide Shikanaishikanai2023-11-27Testing
NameT# Ann.AuthorMaintainerUpdated_at Status

401-420 / 556 show all
GlycoConjugate-collection 0Jin-Dong Kim2023-11-28Developing
Colil 3.34 KDBCLSToyofumi Fujiwara2023-11-28Testing
PMC-KEGG 27yucca2023-11-28Developing
PT_NER_NEL_CONSENSUS 354dpavot2023-11-27
bionlp-ost-19-BB-norm-ner-dev 1.33 Kldeleger2023-11-27Developing
LitCovid-sample-PD-MONDO 1.21 KJin-Dong Kim2023-11-27Developing
CORD-19-sample-sentences 161Jin-Dong Kim2023-11-27Developing
CORD-19-sample-HP 39Jin-Dong Kim2023-11-27Developing
CHEMDNER-training-test 29.4 KMartin Krallinger et al.Jin-Dong Kim2023-11-27Testing
GlycoBiology-PACDB 3.03 KToshihide Shikanaishikanai2023-11-27Testing
CORD-PICO 69.6 KSimon Susterssuster2023-11-27Developing
pubtator-sample 28Zhiyong LuJin-Dong Kim2023-11-27Testing
tagtog-demo 262tagtog2023-11-27Developing
CellFinder 4.75 KMariana Neves, Alexander Damaschun, Andreas Kurtz, Ulf LeserMariana Neves2023-11-27Released
med-device 434laurenc2023-11-27Developing
taxonomy 10rdmpage2023-11-27Testing
123123123 150yaoxinzhi2023-11-27Released
performance-test 480 KJin-Dong Kim2023-11-27Testing
disease_gene_microbe_small 536evangelos2023-11-27Testing
Glycobiology-GlycanName 946Toshihide Shikanaishikanai2023-11-27Testing