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NameTDescription# Ann.AuthorMaintainerUpdated_atStatus

181-200 / 255 show all
GlycoBiology-NCBITAXONNCBITAXON-based annotation to GlycoBiology abstracts32.7 Kshuo502016-05-10Testing
GO-MFAnnotation for molecular functions as defined in the "Molecular Function" subtree of Gene Ontology19.7 KDBCLSJin-Dong Kim2016-05-03Testing
uniprot-humanUniprot proteins for human21.9 KJin-Dong KimJin-Dong Kim2016-04-25Testing
Test_PubTator62Chih-Hsuan Wei2016-04-20Testing
Glycobiology-GlycanName946Toshihide Shikanaishikanai2016-04-06Testing
Staphylococcus7.46 Kharuoharuo2016-04-06Testing
GlycoBiology-cGGDBcGGDB-based annotation to GlycoBiology abstracts36Toshihide Shikanaishikanai2016-02-01Testing
GlycoBiology-GDGDBGDGDB-based annotation to GlycoBiology abstracts 2.46 KToshihide Shikanaishikanai2016-02-01Testing
GlycoBiology-PACDBcGGDB-based annotation to GlycoBiology abstracts3.03 KToshihide Shikanaishikanai2016-02-01Testing
GlycoBiology-FMAFMA ontology-based annotation to GlycoBiology abstracts96.3 KJin-Dong Kim2016-01-31Testing
EVEXDB11.2 MEVEXDBsmp2016-01-28Testing
pubtator-sampleSample annotation of PubTator produced by Zhiyong Lu et al.28Zhiyong LuJin-Dong Kim2016-01-19Testing
bionlp-st-gro-2013-developmentThe development data set of the BioNLP-ST 2013 GRO task, including 50 MEDLINE abstracts that are annotated with concepts and relations of the Gene Regulation Ontology (GRO; http://www.ebi.ac.uk/Rebholz-srv/GRO/GRO.html)2.66 KJung-jae KimJung-jae Kim2016-01-08Testing
bionlp-st-gro-2013-trainingThe training data set of the BioNLP-ST 2013 GRO task, including 150 MEDLINE abstracts that are annotated with concepts and relations of the Gene Regulation Ontology (GRO; http://www.ebi.ac.uk/Rebholz-srv/GRO/GRO.html)8.02 KJung-jae KimJung-jae Kim2016-01-08Testing
biosemtesttest submitting Peregrine annotations35.6 KMark Thompsonmarkthompson2015-12-17Testing
prefixtesttest of prefix functionality2Samposmp2015-11-25Testing
SPECIES800_autotaggedThis project comprises the SPECIES800 corpus documents automatically annotated by the Jensenlab tagger. Annotated entity types are: Genes/proteins from the mentioned organisms (and any human ones) PubChem Compound identifiers NCBI Taxonomy entries Gene Ontology cellular component terms BRENDA Tissue Ontology terms Disease Ontology terms Environment Ontology terms The SPECIES 800 (S800) comprises 800 PubMed abstracts. In its original form species mentions were manually identified and mapped to the corresponding NCBI Taxonomy identifiers. Described in: The SPECIES and ORGANISMS Resources for Fast and Accurate Identification of Taxonomic Names in Text. Pafilis E, Frankild SP, Fanini L, Faulwetter S, Pavloudi C, et al. (2013). PLoS ONE, 2013, 8(6): e65390. doi:10.1371/journal.pone.0065390. The manually annotated corpus is also available as a PubAnnotation project (see here). 0Evangelos Pafilis, Sampo Pyysalo, Lars Juhl Jensenevangelos2015-11-20Testing
tf-test0Takatomo Fujisawa2015-11-20Testing
Frame annotation ver10Younggyun Hahmkaist_nlp2015-11-10Testing
BioASQ-samplecollection of PubMed articles which appear in the BioASQ sample data set.0BioASQJin-Dong Kim2015-10-13Testing
NameT# Ann.AuthorMaintainerUpdated_atStatus

181-200 / 255 show all
GlycoBiology-NCBITAXON32.7 Kshuo502016-05-10Testing
GO-MF19.7 KDBCLSJin-Dong Kim2016-05-03Testing
uniprot-human21.9 KJin-Dong KimJin-Dong Kim2016-04-25Testing
Test_PubTator62Chih-Hsuan Wei2016-04-20Testing
Glycobiology-GlycanName946Toshihide Shikanaishikanai2016-04-06Testing
Staphylococcus7.46 Kharuoharuo2016-04-06Testing
GlycoBiology-cGGDB36Toshihide Shikanaishikanai2016-02-01Testing
GlycoBiology-GDGDB2.46 KToshihide Shikanaishikanai2016-02-01Testing
GlycoBiology-PACDB3.03 KToshihide Shikanaishikanai2016-02-01Testing
GlycoBiology-FMA96.3 KJin-Dong Kim2016-01-31Testing
EVEXDB11.2 MEVEXDBsmp2016-01-28Testing
pubtator-sample28Zhiyong LuJin-Dong Kim2016-01-19Testing
bionlp-st-gro-2013-development2.66 KJung-jae KimJung-jae Kim2016-01-08Testing
bionlp-st-gro-2013-training8.02 KJung-jae KimJung-jae Kim2016-01-08Testing
biosemtest35.6 KMark Thompsonmarkthompson2015-12-17Testing
prefixtest2Samposmp2015-11-25Testing
SPECIES800_autotagged0Evangelos Pafilis, Sampo Pyysalo, Lars Juhl Jensenevangelos2015-11-20Testing
tf-test0Takatomo Fujisawa2015-11-20Testing
Frame annotation ver10Younggyun Hahmkaist_nlp2015-11-10Testing
BioASQ-sample0BioASQJin-Dong Kim2015-10-13Testing