| glycogenes | | | 2.75 K | | Jin-Dong Kim | 2023-11-30 | Testing | |
| TextMining-in-bioinformatics | | TextMining in bioinformatics | 0 | | Aohnewug | 2020-04-21 | Developing | |
| LitCoin-Disease-Tuning-1 | | Annotator=PD-MeSH2022_C_F03_plus_allFN-B | 6.98 K | | yucca | 2023-11-29 | | |
| ngly1-sample1 | | | 25 | | Nuria | 2023-11-27 | | |
| SMAFIRA_Feedback_Research_Goal | | | 15 | | zebet | 2023-11-28 | Released | |
| c_corpus | | Documents included in the c_corpus: https://github.com/SMAFIRA/c_corpus/blob/master/SMAFIRAc_0.4_Annotations.csv | 107 K | | | 2023-11-29 | Released | |
| bionlp-ost-19-BB-norm-dev | | | 1.33 K | | ldeleger | 2023-11-29 | Developing | |
| bionlp-ost-19-BB-kb-test | | | 2.04 K | | ldeleger | 2023-11-29 | Developing | |
| vtt_friends_s01e04 | | | 162 | | donghwan kim | 2023-11-29 | | |
| ngly1-sample2 | | | 15 | | Nuria | 2023-11-29 | | |
| vtt_friends_s01e09 | | | 0 | | donghwan kim | 2023-11-29 | | |
| bionlp-ost-19-BB-norm-train | | | 2.45 K | | ldeleger | 2023-11-29 | Developing | |
| silkworm_test | | test project | 457 | | yaguchi | 2023-11-29 | Testing | |
| Goldhamster2_CellLineAnn | | | 618 | | zebet | 2023-11-29 | Developing | |
| LitCovid-PD-MONDO-v1 | | PubDictionaries annotation for disease terms - updated at 2020-04-20
It is based on MONDO Version 2020-04-20.
The terms in MONDO are loaded in PubDictionaries, with which the annotations in this project are produced. The parameter configuration used for this project is here.
Note that it is an automatically generated dictionary-based annotation. It will be updated periodically, as the documents are increased, and the dictionary is improved. | 13.4 K | | Jin-Dong Kim | 2023-11-29 | Released | |
| LitCoin-PubTator-for-Tuning | | A set of randomly selected PubMed articles with PubTator annotation.
The labels of PubTator annotations are converted to corresponding labels for LitCoin as follows:
'Gene' -> 'GeneOrGeneProduct',
'Disease' -> 'DiseaseOrPhenotypicFeature',
'Chemical' -> 'ChemicalEntity'
'Species' -> 'OrganismTaxon'
'Mutation' -> 'SequenceVariant'
'CellLine' -> 'CellLine' | 14.2 K | | Jin-Dong Kim | 2023-11-29 | | |
| RELISH-DB | | Abstracts contained in the data of the RELISH-DB (https://relishdb.ict.griffith.edu.au) made available for download here.
Data was downloaded from here: https://figshare.com/projects/RELISH-DB/60095
Related publication: https://academic.oup.com/database/article/doi/10.1093/database/baz085/5608006#200722023 | 0 | | | 2023-11-29 | Released | |
| bionlp-ost-19-BB-rel-test | | | 2.07 K | | ldeleger | 2023-11-29 | Developing | |
| ENG_RE_Diana | | | 213 | | dpavot | 2023-11-29 | Developing | |
| bionlp-ost-19-BB-kb-ner-dev | | | 1.9 K | | ldeleger | 2023-11-29 | Developing | |
