SeeDev-binary@ldeleger:SeeDev-binary-14701918-3
Annnotations
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 4-26 | Pathway | denotes | production of mucilage |
| E27 | 4-26 | Is_Localized_In | denotes | production of mucilage |
| T3 | 34-49 | Tissue | denotes | epidermal cells |
| T2 | 34-78 | Tissue | denotes | epidermal cells of the Arabidopsis seed coat |
| T4 | 57-68 | Genotype | denotes | Arabidopsis |
| T5 | 69-78 | Tissue | denotes | seed coat |
| T6 | 104-125 | Regulatory_Network | denotes | developmental process |
| T7 | 143-154 | Development_Phase | denotes | cell growth |
| T8-0 | 168-180 | _FRAGMENT | denotes | biosynthesis |
| T9-0 | 185-200 | _FRAGMENT | denotes | polar secretion |
| T8-1 | 221-230 | Pathway | denotes | of pectin |
| T9-1 | 221-230 | Pathway | denotes | of pectin |
| T10 | 232-265 | Regulatory_Network | denotes | formation of a cytoplasmic column |
| T11 | 274-298 | Regulatory_Network | denotes | cytoplasmic constriction |
| E15 | 274-298 | Regulates_Process | denotes | cytoplasmic constriction |
| T12 | 303-323 | Regulatory_Network | denotes | vacuolar contraction |
| E19 | 303-323 | Regulates_Process | denotes | vacuolar contraction |
| T13 | 343-377 | Regulatory_Network | denotes | synthesis of a secondary cell wall |
| T15 | 458-467 | Tissue | denotes | Seed coat |
| T14 | 458-476 | Pathway | denotes | Seed coat mucilage |
| E28 | 458-476 | Is_Localized_In | denotes | Seed coat mucilage |
| T16 | 523-534 | Genotype | denotes | Arabidopsis |
| T17 | 539-542 | Genotype | denotes | mum |
| E23 | 539-542 | Regulates_Process | denotes | mum |
| T18 | 544-561 | Genotype | denotes | mucilage-modified |
| T19 | 581-600 | Pathway | denotes | mucilage production |
| T20-0 | 672-684 | _FRAGMENT | denotes | Mutations in |
| E46-0 | 672-684 | _FRAGMENT | denotes | Mutations in |
| T20-1 | 705-709 | Genotype | denotes | MUM4 |
| T21 | 705-709 | Gene | denotes | MUM4 |
| E46-1 | 705-709 | Regulates_Process | denotes | MUM4 |
| T22-0 | 735-743 | _FRAGMENT | denotes | mucilage |
| T22-1 | 751-759 | Pathway | denotes | released |
| T23 | 765-786 | Tissue | denotes | hydrated mature seeds |
| E16 | 765-786 | Regulates_Process | denotes | hydrated mature seeds |
| T27 | 866-870 | Tissue | denotes | seed |
| T26 | 866-875 | Tissue | denotes | seed coat |
| T25 | 866-885 | Tissue | denotes | seed coat epidermal |
| T24 | 866-897 | Development_Phase | denotes | seed coat epidermal development |
| T28 | 941-946 | Tissue | denotes | seeds |
| E49 | 941-946 | Regulates_Process | denotes | seeds |
| T29 | 960-976 | Pathway | denotes | release mucilage |
| T30 | 982-991 | Environmental_Factor | denotes | hydration |
| E21 | 982-991 | Regulates_Process | denotes | hydration |
| E40 | 982-991 | Is_Linked_To | denotes | hydration |
| T31 | 993-1007 | Genotype | denotes | Mutants in AP2 |
| E20 | 993-1007 | Regulates_Process | denotes | Mutants in AP2 |
| E26 | 993-1007 | Regulates_Process | denotes | Mutants in AP2 |
| T32 | 1004-1007 | Gene | denotes | AP2 |
| T33 | 1009-1017 | Gene | denotes | APETALA2 |
| E32 | 1009-1017 | Is_Functionally_Equivalent_To | denotes | APETALA2 |
| T34 | 1041-1072 | Regulatory_Network | denotes | defects in floral morphogenesis |
| T35 | 1052-1072 | Development_Phase | denotes | floral morphogenesis |
| T36 | 1074-1144 | Regulatory_Network | denotes | lack differentiation past the growth phase of mucilage secretory cells |
| T37 | 1104-1116 | Development_Phase | denotes | growth phase |
| T39 | 1120-1128 | Pathway | denotes | mucilage |
| T38 | 1120-1144 | Tissue | denotes | mucilage secretory cells |
| T40 | 1190-1194 | Gene | denotes | TTG1 |
| E10 | 1190-1194 | Regulates_Process | denotes | TTG1 |
| E12 | 1190-1194 | Regulates_Process | denotes | TTG1 |
| E13 | 1190-1194 | Regulates_Process | denotes | TTG1 |
| T41 | 1196-1221 | Gene | denotes | TRANSPARENT TESTA GLABRA1 |
| E31 | 1196-1221 | Is_Functionally_Equivalent_To | denotes | TRANSPARENT TESTA GLABRA1 |
| T42 | 1224-1228 | Gene | denotes | TTG2 |
| E11 | 1224-1228 | Regulates_Process | denotes | TTG2 |
| E18 | 1224-1228 | Regulates_Process | denotes | TTG2 |
| E25 | 1224-1228 | Regulates_Process | denotes | TTG2 |
| T43 | 1234-1237 | Gene | denotes | GL2 |
| E9 | 1234-1237 | Regulates_Process | denotes | GL2 |
| E17 | 1234-1237 | Regulates_Process | denotes | GL2 |
| E22 | 1234-1237 | Regulates_Process | denotes | GL2 |
| T44 | 1239-1246 | Gene | denotes | GLABRA2 |
| E30 | 1239-1246 | Is_Functionally_Equivalent_To | denotes | GLABRA2 |
| T46 | 1304-1312 | Tissue | denotes | trichome |
| T45 | 1304-1326 | Regulatory_Network | denotes | trichome specification |
| T47-0 | 1333-1343 | _FRAGMENT | denotes | defects in |
| T48-0 | 1333-1343 | _FRAGMENT | denotes | defects in |
| T47-1 | 1349-1357 | _FRAGMENT | denotes | mucilage |
| T49-0 | 1349-1357 | _FRAGMENT | denotes | mucilage |
| T48-1 | 1362-1382 | Regulatory_Network | denotes | columella production |
| T50 | 1362-1382 | Pathway | denotes | columella production |
| T47-2 | 1372-1382 | Regulatory_Network | denotes | production |
| T49-1 | 1372-1382 | Pathway | denotes | production |
| T51 | 1390-1399 | Tissue | denotes | seed coat |
| E35 | 1390-1399 | Regulates_Expression | denotes | seed coat |
| E36 | 1390-1399 | Regulates_Expression | denotes | seed coat |
| E37 | 1390-1399 | Regulates_Expression | denotes | seed coat |
| E47 | 1390-1399 | Regulates_Process | denotes | seed coat |
| E48 | 1390-1399 | Regulates_Process | denotes | seed coat |
| T52 | 1543-1552 | Tissue | denotes | trichomes |
| E41 | 1543-1552 | Regulates_Expression | denotes | trichomes |
| E42 | 1543-1552 | Regulates_Expression | denotes | trichomes |
| T53 | 1557-1567 | Tissue | denotes | root hairs |
| E43 | 1557-1567 | Regulates_Expression | denotes | root hairs |
| E44 | 1557-1567 | Regulates_Expression | denotes | root hairs |
| T54 | 1573-1577 | Protein | denotes | TTG1 |
| E5 | 1573-1577 | Regulates_Expression | denotes | TTG1 |
| E6 | 1573-1577 | Regulates_Expression | denotes | TTG1 |
| E7 | 1573-1577 | Interacts_With | denotes | TTG1 |
| E8 | 1573-1577 | Interacts_With | denotes | TTG1 |
| E38 | 1573-1577 | Is_Localized_In | denotes | TTG1 |
| E39 | 1573-1577 | Is_Localized_In | denotes | TTG1 |
| E53 | 1573-1577 | Is_Linked_To | denotes | TTG1 |
| E56 | 1573-1577 | Is_Linked_To | denotes | TTG1 |
| E57 | 1573-1577 | Is_Linked_To | denotes | TTG1 |
| T56 | 1595-1617 | Protein_Domain | denotes | basic helix-loop-helix |
| T55-0 | 1595-1617 | _FRAGMENT | denotes | basic helix-loop-helix |
| E29 | 1595-1617 | Is_Functionally_Equivalent_To | denotes | basic helix-loop-helix |
| T57 | 1619-1623 | Protein_Domain | denotes | bHLH |
| E51 | 1619-1623 | Is_Linked_To | denotes | bHLH |
| E54 | 1619-1623 | Is_Linked_To | denotes | bHLH |
| E55 | 1619-1623 | Is_Linked_To | denotes | bHLH |
| T55-1 | 1625-1632 | Protein_Family | denotes | protein |
| T58 | 1655-1658 | Protein_Family | denotes | MYB |
| E52 | 1655-1658 | Is_Linked_To | denotes | MYB |
| E58 | 1655-1658 | Is_Linked_To | denotes | MYB |
| E59 | 1655-1658 | Is_Linked_To | denotes | MYB |
| T59 | 1684-1687 | Gene | denotes | GL2 |
| T60 | 1692-1696 | Gene | denotes | TTG2 |
| T61 | 1771-1789 | Genotype | denotes | mutations in MYB61 |
| E14 | 1771-1789 | Regulates_Process | denotes | mutations in MYB61 |
| E24 | 1771-1789 | Regulates_Process | denotes | mutations in MYB61 |
| T62 | 1784-1789 | Gene | denotes | MYB61 |
| T63-0 | 1834-1842 | _FRAGMENT | denotes | mucilage |
| T64 | 1847-1867 | Pathway | denotes | columella production |
| T63-1 | 1857-1867 | Pathway | denotes | production |
| T65 | 1875-1886 | Genotype | denotes | Arabidopsis |
| T66 | 1887-1896 | Tissue | denotes | seed coat |
| E45 | 1887-1896 | Regulates_Process | denotes | seed coat |
| E50 | 1887-1896 | Regulates_Process | denotes | seed coat |
| T67 | 1982-1986 | Gene | denotes | MUM4 |
| T68 | 1994-2034 | Development_Phase | denotes | development of the Arabidopsis seed coat |
| T69 | 2013-2024 | Genotype | denotes | Arabidopsis |
| T70 | 2025-2034 | Tissue | denotes | seed coat |
| T71 | 2064-2068 | Gene | denotes | MUM4 |
| T72 | 2090-2094 | Gene | denotes | MUM4 |
| E34 | 2090-2094 | Transcribes_Or_Translates_To | denotes | MUM4 |
| T73 | 2114-2132 | Protein_Family | denotes | NDP-l-Rha synthase |
| T74 | 2165-2198 | Regulatory_Network | denotes | reduced mucilage in the seed coat |
| T75 | 2189-2198 | Tissue | denotes | seed coat |
| T76 | 2206-2223 | Regulatory_Network | denotes | altered columella |
| T77 | 2254-2258 | Gene | denotes | MUM4 |
| T79 | 2254-2258 | Gene | denotes | MUM4 |
| T78-0 | 2254-2258 | _FRAGMENT | denotes | MUM4 |
| T81 | 2295-2304 | Tissue | denotes | seed coat |
| T80 | 2295-2320 | Development_Phase | denotes | seed coat differentiation |
| E4 | 2295-2320 | Regulates_Expression | denotes | seed coat differentiation |
| T78-1 | 2335-2345 | RNA | denotes | transcript |
| T82 | 2374-2401 | Development_Phase | denotes | time of mucilage production |
| E33 | 2374-2401 | Regulates_Accumulation | denotes | time of mucilage production |
| T83 | 2382-2401 | Pathway | denotes | mucilage production |
| T84 | 2416-2420 | Gene | denotes | MUM4 |
| T85 | 2507-2510 | Protein | denotes | AP2 |
| E3 | 2507-2510 | Regulates_Expression | denotes | AP2 |
| T86 | 2512-2516 | Protein | denotes | TTG1 |
| E1 | 2512-2516 | Regulates_Expression | denotes | TTG1 |
| T87 | 2522-2525 | Protein | denotes | GL2 |
| E2 | 2522-2525 | Regulates_Expression | denotes | GL2 |
| T88 | 2571-2590 | Pathway | denotes | mucilage production |
| T91 | 2613-2617 | Tissue | denotes | seed |
| T90 | 2613-2622 | Tissue | denotes | seed coat |
| T89 | 2613-2638 | Tissue | denotes | seed coat epidermal cells |
| T93 | 2693-2702 | Tissue | denotes | seed coat |
| T92 | 2693-2728 | Regulatory_Network | denotes | seed coat epidermal differentiation |
| C-E46-0 | E46-1 | E46-0 | _lexicallyChainedTo | MUM4,Mutations in |
| C-T20-0 | T20-1 | T20-0 | _lexicallyChainedTo | MUM4,Mutations in |
| C-T22-0 | T22-1 | T22-0 | _lexicallyChainedTo | released,mucilage |
| C-T47-0 | T47-1 | T47-0 | _lexicallyChainedTo | mucilage,defects in |
| C-T47-1 | T47-2 | T47-1 | _lexicallyChainedTo | production,mucilage |
| C-T48-0 | T48-1 | T48-0 | _lexicallyChainedTo | "columella production",defects in |
| C-T49-0 | T49-1 | T49-0 | _lexicallyChainedTo | production,mucilage |
| C-T55-0 | T55-1 | T55-0 | _lexicallyChainedTo | protein,basic helix-loop-helix |
| C-T63-0 | T63-1 | T63-0 | _lexicallyChainedTo | production,mucilage |
| C-T78-0 | T78-1 | T78-0 | _lexicallyChainedTo | transcript,MUM4 |
| C-T8-0 | T8-1 | T8-0 | _lexicallyChainedTo | of pectin,biosynthesis |
| C-T9-0 | T9-1 | T9-0 | _lexicallyChainedTo | of pectin,polar secretion |
| R1 | E1 | T86 | Agent | TTG1,TTG1 |
| R10 | E5 | T60 | DNA | TTG1,TTG2 |
| R100 | E50 | T63-0 | Process | seed coat,mucilage |
| R101 | E51 | T57 | Agent1 | bHLH,bHLH |
| R102 | E51 | T59 | Agent2 | bHLH,GL2 |
| R103 | E52 | T58 | Agent1 | MYB,MYB |
| R104 | E52 | T60 | Agent2 | MYB,TTG2 |
| R105 | E53 | T54 | Agent1 | TTG1,TTG1 |
| R106 | E53 | T60 | Agent2 | TTG1,TTG2 |
| R107 | E54 | T57 | Agent1 | bHLH,bHLH |
| R108 | E54 | T54 | Agent2 | bHLH,TTG1 |
| R109 | E55 | T57 | Agent1 | bHLH,bHLH |
| R11 | E6 | T54 | Agent | TTG1,TTG1 |
| R110 | E55 | T60 | Agent2 | bHLH,TTG2 |
| R111 | E56 | T54 | Agent1 | TTG1,TTG1 |
| R112 | E56 | T54 | Agent2 | TTG1,TTG1 |
| R113 | E57 | T54 | Agent1 | TTG1,TTG1 |
| R114 | E57 | T59 | Agent2 | TTG1,GL2 |
| R115 | E58 | T58 | Agent1 | MYB,MYB |
| R116 | E58 | T54 | Agent2 | MYB,TTG1 |
| R117 | E59 | T58 | Agent1 | MYB,MYB |
| R118 | E59 | T59 | Agent2 | MYB,GL2 |
| R12 | E6 | T59 | DNA | TTG1,GL2 |
| R13 | E7 | T54 | Agent | TTG1,TTG1 |
| R14 | E7 | T58 | Target | TTG1,MYB |
| R15 | E8 | T54 | Agent | TTG1,TTG1 |
| R16 | E8 | T57 | Target | TTG1,bHLH |
| R17 | E9 | T43 | Agent | GL2,GL2 |
| R18 | E9 | T48-0 | Process | GL2,defects in |
| R19 | E10 | T40 | Agent | TTG1,TTG1 |
| R2 | E1 | T84 | DNA | TTG1,MUM4 |
| R20 | E10 | T45 | Process | TTG1,trichome specification |
| R21 | E11 | T42 | Agent | TTG2,TTG2 |
| R22 | E11 | T47-0 | Process | TTG2,defects in |
| R23 | E12 | T40 | Agent | TTG1,TTG1 |
| R24 | E12 | T47-0 | Process | TTG1,defects in |
| R25 | E13 | T40 | Agent | TTG1,TTG1 |
| R26 | E13 | T48-0 | Process | TTG1,defects in |
| R27 | E14 | T61 | Agent | mutations in MYB61,mutations in MYB61 |
| R28 | E14 | T64 | Process | mutations in MYB61,columella production |
| R29 | E15 | T11 | Agent | cytoplasmic constriction,cytoplasmic constriction |
| R3 | E2 | T87 | Agent | GL2,GL2 |
| R30 | E15 | T10 | Process | cytoplasmic constriction,"formation of a cytoplasmic column" |
| R31 | E16 | T23 | Agent | hydrated mature seeds,hydrated mature seeds |
| R32 | E16 | T22-0 | Process | hydrated mature seeds,mucilage |
| R33 | E17 | T43 | Agent | GL2,GL2 |
| R34 | E17 | T47-0 | Process | GL2,defects in |
| R35 | E18 | T42 | Agent | TTG2,TTG2 |
| R36 | E18 | T48-0 | Process | TTG2,defects in |
| R37 | E19 | T12 | Agent | vacuolar contraction,vacuolar contraction |
| R38 | E19 | T10 | Process | vacuolar contraction,"formation of a cytoplasmic column" |
| R39 | E20 | T31 | Agent | Mutants in AP2,Mutants in AP2 |
| R4 | E2 | T84 | DNA | GL2,MUM4 |
| R40 | E20 | T34 | Process | Mutants in AP2,defects in floral morphogenesis |
| R41 | E21 | T30 | Agent | hydration,hydration |
| R42 | E21 | T29 | Process | hydration,release mucilage |
| R43 | E22 | T43 | Agent | GL2,GL2 |
| R44 | E22 | T45 | Process | GL2,trichome specification |
| R45 | E23 | T17 | Agent | mum,mum |
| R46 | E23 | T19 | Process | mum,mucilage production |
| R47 | E24 | T61 | Agent | mutations in MYB61,mutations in MYB61 |
| R48 | E24 | T63-0 | Process | mutations in MYB61,mucilage |
| R49 | E25 | T42 | Agent | TTG2,TTG2 |
| R5 | E3 | T85 | Agent | AP2,AP2 |
| R50 | E25 | T45 | Process | TTG2,trichome specification |
| R51 | E26 | T31 | Agent | Mutants in AP2,Mutants in AP2 |
| R52 | E26 | T36 | Process | Mutants in AP2,"lack differentiation past the growth phase of mucilage secretory cells" |
| R53 | E27 | T1 | Process | production of mucilage,production of mucilage |
| R54 | E27 | T2 | Target_Tissue | production of mucilage,epidermal cells of the Arabidopsis seed coat |
| R55 | E28 | T14 | Process | Seed coat mucilage,Seed coat mucilage |
| R56 | E28 | T15 | Target_Tissue | Seed coat mucilage,Seed coat |
| R57 | E29 | T56 | Element1 | basic helix-loop-helix,basic helix-loop-helix |
| R58 | E29 | T57 | Element2 | basic helix-loop-helix,bHLH |
| R59 | E30 | T44 | Element1 | GLABRA2,GLABRA2 |
| R6 | E3 | T84 | DNA | AP2,MUM4 |
| R60 | E30 | T43 | Element2 | GLABRA2,GL2 |
| R61 | E31 | T41 | Element1 | TRANSPARENT TESTA GLABRA1,TRANSPARENT TESTA GLABRA1 |
| R62 | E31 | T40 | Element2 | TRANSPARENT TESTA GLABRA1,TTG1 |
| R63 | E32 | T33 | Element1 | APETALA2,APETALA2 |
| R64 | E32 | T32 | Element2 | APETALA2,AP2 |
| R65 | E33 | T82 | Agent | "time of mucilage production","time of mucilage production" |
| R66 | E33 | T78-0 | Functional_Molecule | "time of mucilage production",MUM4 |
| R67 | E34 | T72 | Source | MUM4,MUM4 |
| R68 | E34 | T73 | Product | MUM4,NDP-l-Rha synthase |
| R69 | E35 | T51 | Agent | seed coat,seed coat |
| R7 | E4 | T80 | Agent | seed coat differentiation,seed coat differentiation |
| R70 | E35 | T40 | DNA | seed coat,TTG1 |
| R71 | E36 | T51 | Agent | seed coat,seed coat |
| R72 | E36 | T43 | DNA | seed coat,GL2 |
| R73 | E37 | T51 | Agent | seed coat,seed coat |
| R74 | E37 | T42 | DNA | seed coat,TTG2 |
| R75 | E38 | T54 | Functional_Molecule | TTG1,TTG1 |
| R76 | E38 | T52 | Target_Tissue | TTG1,trichomes |
| R77 | E39 | T54 | Functional_Molecule | TTG1,TTG1 |
| R78 | E39 | T53 | Target_Tissue | TTG1,root hairs |
| R79 | E40 | T30 | Agent1 | hydration,hydration |
| R8 | E4 | T77 | DNA | seed coat differentiation,MUM4 |
| R80 | E40 | T28 | Agent2 | hydration,seeds |
| R81 | E41 | T52 | Agent | trichomes,trichomes |
| R82 | E41 | T59 | DNA | trichomes,GL2 |
| R83 | E42 | T52 | Agent | trichomes,trichomes |
| R84 | E42 | T60 | DNA | trichomes,TTG2 |
| R85 | E43 | T53 | Agent | root hairs,root hairs |
| R86 | E43 | T60 | DNA | root hairs,TTG2 |
| R87 | E44 | T53 | Agent | root hairs,root hairs |
| R88 | E44 | T59 | DNA | root hairs,GL2 |
| R89 | E45 | T66 | Agent | seed coat,seed coat |
| R9 | E5 | T54 | Agent | TTG1,TTG1 |
| R90 | E45 | T64 | Process | seed coat,columella production |
| R91 | E46-0 | T20-0 | Agent | Mutations in,Mutations in |
| R92 | E46-0 | T22-0 | Process | Mutations in,mucilage |
| R93 | E47 | T51 | Agent | seed coat,seed coat |
| R94 | E47 | T47-0 | Process | seed coat,defects in |
| R95 | E48 | T51 | Agent | seed coat,seed coat |
| R96 | E48 | T48-0 | Process | seed coat,defects in |
| R97 | E49 | T28 | Agent | seeds,seeds |
| R98 | E49 | T29 | Process | seeds,release mucilage |
| R99 | E50 | T66 | Agent | seed coat,seed coat |