| Id |
Subject |
Object |
Predicate |
Lexical cue |
tao:has_database_id |
tao:has_standard_notation |
| T1 |
42-52 |
Species |
denotes |
SARS-Cov-2 |
Tax:2697049 |
|
| T73 |
53-66 |
Gene |
denotes |
spike protein |
Gene:43740568 |
|
| T2 |
142-152 |
Species |
denotes |
SARS-CoV-2 |
Tax:2697049 |
|
| T74 |
188-198 |
Area |
denotes |
world-wide |
|
|
| T75 |
199-207 |
Pandemic |
denotes |
pandemic |
MESH:D058873 |
|
| T76 |
208-216 |
Disease |
denotes |
COVID-19 |
MESH:C000657245 |
|
| T14 |
238-251 |
Gene |
denotes |
Spike protein |
Gene:43740568 |
|
| T24 |
253-254 |
Gene |
denotes |
S |
Gene:43740568 |
|
| T13 |
343-356 |
Gene |
denotes |
Spike protein |
Gene:43740568 |
|
| T17 |
358-359 |
Gene |
denotes |
S |
Gene:43740568 |
|
| T77 |
493-516 |
Biological |
denotes |
receptor binding domain |
|
|
| T6 |
518-521 |
Biological |
denotes |
RBD |
|
|
| T44 |
552-561 |
Biological |
denotes |
S1 domain |
|
|
| T66 |
622-627 |
Gene |
denotes |
ACE-2 |
Gene:59272 |
|
| T68 |
641-646 |
Species |
denotes |
human |
Tax:9606 |
|
| T67 |
647-663 |
Biological |
denotes |
epithelial cells |
|
|
| T3 |
914-924 |
Species |
denotes |
SARS-CoV-2 |
Tax:2697049 |
|
| T15 |
925-938 |
Gene |
denotes |
Spike protein |
Gene:43740568 |
|
| T47 |
1275-1277 |
Biological |
denotes |
S2 |
|
|
| T49 |
1295-1301 |
Biological |
denotes |
domain |
|
|
| T50 |
1443-1445 |
Biological |
denotes |
S1 |
|
|
| T48 |
1446-1448 |
Biological |
denotes |
S2 |
|
|
| T45 |
1476-1485 |
Biological |
denotes |
S1 domain |
|
|
| T7 |
1547-1550 |
Biological |
denotes |
RBD |
|
|
| T51 |
1551-1554 |
Biological |
denotes |
NTD |
|
|
| T8 |
1709-1712 |
Biological |
denotes |
RBD |
|
|
| T55 |
1721-1727 |
Position |
denotes |
ARG357 |
|
p.R357 |
| T78 |
1735-1742 |
PositiveRegulation |
denotes |
Up-Down |
|
|
| T80 |
1743-1754 |
Bind |
denotes |
interaction |
|
|
| T56 |
1784-1790 |
Position |
denotes |
ALA520 |
|
p.A520 |
| T58 |
1791-1797 |
Position |
denotes |
PRO521 |
|
p.P521 |
| T60 |
1798-1804 |
Position |
denotes |
ALA522 |
|
p.A522 |
| T9 |
1846-1849 |
Biological |
denotes |
RBD |
|
|
| T82 |
1888-1899 |
PositiveRegulation |
denotes |
stabilizing |
|
|
| T81 |
1900-1911 |
Bind |
denotes |
interaction |
|
|
| T52 |
1921-1924 |
Biological |
denotes |
NTD |
|
|
| T62 |
2126-2138 |
Biological |
denotes |
S1 subdomain |
|
|
| T63 |
2140-2143 |
Biological |
denotes |
SD1 |
|
|
| T10 |
2153-2156 |
Biological |
denotes |
RBD |
|
|
| T85 |
2303-2313 |
NegativeRegulation |
denotes |
Down state |
|
|
| T57 |
2386-2392 |
Position |
denotes |
ALA520 |
|
p.A520 |
| T59 |
2393-2399 |
Position |
denotes |
PRO521 |
|
p.P521 |
| T61 |
2400-2406 |
Position |
denotes |
ALA522 |
|
p.A522 |
| T5 |
2414-2417 |
Biological |
denotes |
RBD |
|
|
| T69 |
2449-2455 |
Position |
denotes |
GLN564 |
|
p.Q564 |
| T64 |
2463-2473 |
Biological |
denotes |
SD1 domain |
|
|
| T88 |
2486-2504 |
Position |
denotes |
same three residue |
|
|
| T86 |
2524-2534 |
PositiveRegulation |
denotes |
stabilizer |
|
|
| T11 |
2542-2545 |
Biological |
denotes |
RBD |
|
|
| T90 |
2581-2593 |
Bind |
denotes |
interactions |
|
|
| T53 |
2615-2618 |
Biological |
denotes |
NTD |
|
|
| T87 |
2639-2644 |
NegativeRegulation |
denotes |
latch |
|
|
| T89 |
2688-2700 |
Bind |
denotes |
interactions |
|
|
| T65 |
2714-2724 |
Biological |
denotes |
SD1 domain |
|
|
| T4 |
2832-2842 |
Species |
denotes |
SARS-CoV-2 |
Tax:2697049 |
|
| T70 |
2883-2891 |
Species |
denotes |
SARS-Cov |
Tax:694009 |
|
| T71 |
2900-2923 |
Species |
denotes |
bat corona virus RatG13 |
Tax:2709072 |
|
| T72 |
3077-3106 |
Mutation |
denotes |
single point mutation (Q564G) |
|
p.Q564G |
| T91 |
3123-3128 |
NegativeRegulation |
denotes |
latch |
|
|
| T92 |
3129-3138 |
Interrupt |
denotes |
releasing |
|
|
| T16 |
3223-3236 |
Gene |
denotes |
Spike protein |
Gene:43740568 |
|
| T46 |
3403-3412 |
Biological |
denotes |
S1 domain |
|
|
| T12 |
3424-3427 |
Biological |
denotes |
RBD |
|
|
| T54 |
3428-3431 |
Biological |
denotes |
NTD |
|
|
| R1 |
T47 |
T49 |
- |
S2,domain |
| R10 |
T82 |
T81 |
is_a |
stabilizing,interaction |
| R11 |
T58 |
T82 |
is_a |
PRO521,stabilizing |
| R12 |
T82 |
T81 |
is_a |
stabilizing,interaction |
| R13 |
T60 |
T82 |
is_a |
ALA522,stabilizing |
| R14 |
T82 |
T81 |
is_a |
stabilizing,interaction |
| R15 |
T52 |
T81 |
to |
NTD,interaction |
| R16 |
T8 |
T55 |
of_a |
RBD,ARG357 |
| R17 |
T8 |
T56 |
of_a |
RBD,ALA520 |
| R18 |
T8 |
T58 |
of_a |
RBD,PRO521 |
| R19 |
T8 |
T60 |
of_a |
RBD,ALA522 |
| R2 |
T62 |
T63 |
abbreviation |
S1 subdomain,SD1 |
| R20 |
T5 |
T57 |
of_a |
RBD,ALA520 |
| R21 |
T5 |
T59 |
of_a |
RBD,PRO521 |
| R22 |
T5 |
T61 |
of_a |
RBD,ALA522 |
| R23 |
T64 |
T69 |
of_a |
SD1 domain,GLN564 |
| R24 |
T57 |
T85 |
is_a |
ALA520,Down state |
| R25 |
T59 |
T85 |
is_a |
PRO521,Down state |
| R26 |
T61 |
T85 |
is_a |
ALA522,Down state |
| R27 |
T69 |
T85 |
is_a |
GLN564,Down state |
| R28 |
T88 |
T86 |
is_a |
same three residue,stabilizer |
| R29 |
T86 |
T90 |
is_a |
stabilizer,interactions |
| R3 |
T6 |
T77 |
abbreviation |
RBD,receptor binding domain |
| R30 |
T88 |
T87 |
is_a |
same three residue,latch |
| R31 |
T87 |
T89 |
is_a |
latch,interactions |
| R32 |
T65 |
T89 |
to |
SD1 domain,interactions |
| R33 |
T53 |
T90 |
to |
NTD,interactions |
| R34 |
T88 |
T57 |
coreference |
same three residue,ALA520 |
| R35 |
T88 |
T59 |
coreference |
same three residue,PRO521 |
| R36 |
T88 |
T61 |
coreference |
same three residue,ALA522 |
| R37 |
T72 |
T92 |
is_a |
single point mutation (Q564G),releasing |
| R38 |
T92 |
T91 |
is_a |
releasing,latch |
| R4 |
T17 |
T13 |
abbreviation |
S,Spike protein |
| R5 |
T24 |
T14 |
abbreviation |
S,Spike protein |
| R6 |
T3 |
T15 |
of_a |
SARS-CoV-2,Spike protein |
| R7 |
T55 |
T78 |
is_a |
ARG357,Up-Down |
| R8 |
T78 |
T80 |
is_a |
Up-Down,interaction |
| R9 |
T56 |
T82 |
is_a |
ALA520,stabilizing |
