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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 238-244 Body_part denotes retina http://purl.org/sig/ont/fma/fma58301
T2 1008-1012 Body_part denotes sole http://purl.org/sig/ont/fma/fma25000
T3 1675-1679 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T4 1683-1687 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T5 1938-1944 Body_part denotes retina http://purl.org/sig/ont/fma/fma58301
T6 4686-4690 Body_part denotes face http://purl.org/sig/ont/fma/fma24728
T7 4755-4760 Body_part denotes cheek http://purl.org/sig/ont/fma/fma46476
T8 4790-4795 Body_part denotes cheek http://purl.org/sig/ont/fma/fma46476
T9 4872-4883 Body_part denotes conjunctiva http://purl.org/sig/ont/fma/fma59011
T10 4995-4999 Body_part denotes body http://purl.org/sig/ont/fma/fma256135
T11 5168-5172 Body_part denotes sole http://purl.org/sig/ont/fma/fma25000
T12 5581-5583 Body_part denotes AG http://purl.org/sig/ont/fma/fma61898
T13 6484-6490 Body_part denotes retina http://purl.org/sig/ont/fma/fma58301
T14 6495-6502 Body_part denotes choroid http://purl.org/sig/ont/fma/fma58298
T15 7511-7515 Body_part denotes back http://purl.org/sig/ont/fma/fma25056
T16 7523-7526 Body_part denotes eye http://purl.org/sig/ont/fma/fma54448

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 238-244 Body_part denotes retina http://purl.obolibrary.org/obo/UBERON_0000966
T2 1675-1679 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T3 1683-1687 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T4 1938-1944 Body_part denotes retina http://purl.obolibrary.org/obo/UBERON_0000966
T5 2329-2342 Body_part denotes Ocular fundus http://purl.obolibrary.org/obo/UBERON_0003951
T6 4686-4690 Body_part denotes face http://purl.obolibrary.org/obo/UBERON_0001456
T7 4755-4760 Body_part denotes cheek http://purl.obolibrary.org/obo/UBERON_0001567
T8 4790-4795 Body_part denotes cheek http://purl.obolibrary.org/obo/UBERON_0001567
T9 4872-4883 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811
T10 6484-6490 Body_part denotes retina http://purl.obolibrary.org/obo/UBERON_0000966
T11 6806-6819 Body_part denotes ocular fundus http://purl.obolibrary.org/obo/UBERON_0003951
T12 7523-7526 Body_part denotes eye http://purl.obolibrary.org/obo/UBERON_0000970

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T1 9-17 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T2 362-386 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T3 388-396 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T4 615-624 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T5 974-982 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 1233-1241 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 1740-1749 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T8 1903-1919 Disease denotes systemic disease http://purl.obolibrary.org/obo/MONDO_0015938
T9 2917-2937 Disease denotes diabetic retinopathy http://purl.obolibrary.org/obo/MONDO_0005266
T10 2926-2937 Disease denotes retinopathy http://purl.obolibrary.org/obo/MONDO_0005283
T11 3953-3977 Disease denotes coronavirus disease 2019 http://purl.obolibrary.org/obo/MONDO_0100096
T12 3979-3987 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T13 4921-4968 Disease denotes severe acute respiratory syndrome coronavirus-2 http://purl.obolibrary.org/obo/MONDO_0100096
T14 4921-4954 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T15 4970-4978 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T16 5027-5036 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T17 5951-5967 Disease denotes systemic disease http://purl.obolibrary.org/obo/MONDO_0015938
T18 6791-6802 Disease denotes papilledema http://purl.obolibrary.org/obo/MONDO_0002003
T19 6846-6854 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T1 160-161 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T2 238-244 http://purl.obolibrary.org/obo/UBERON_0000966 denotes retina
T3 407-410 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T4 418-419 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T5 793-794 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T6 805-810 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T7 1264-1265 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T8 1363-1364 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 1466-1467 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 1543-1546 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T11 1675-1679 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T12 1683-1687 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T13 1834-1835 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 1938-1944 http://purl.obolibrary.org/obo/UBERON_0000966 denotes retina
T15 1961-1972 http://purl.obolibrary.org/obo/BFO_0000030 denotes objectively
T16 2051-2058 http://www.ebi.ac.uk/efo/EFO_0000881 denotes Digital
T17 2099-2106 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T18 2179-2186 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T19 2247-2254 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T20 2295-2297 http://purl.obolibrary.org/obo/CLO_0007490 denotes m9
T21 2360-2361 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T22 2384-2387 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T23 2991-2998 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T24 3069-3071 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T25 3073-3078 http://purl.obolibrary.org/obo/UBERON_0007688 denotes field
T26 3088-3091 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T27 3390-3391 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T28 3689-3690 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T29 3886-3891 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T30 3908-3915 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals
T31 3998-4001 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T32 4204-4213 http://www.ebi.ac.uk/efo/EFO_0000876 denotes extremely
T33 4317-4318 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 4442-4443 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T35 4475-4476 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T36 4686-4690 http://purl.obolibrary.org/obo/UBERON_0001456 denotes face
T37 4807-4810 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T38 4866-4871 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T39 4872-4883 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T40 4872-4883 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T41 4887-4888 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T42 5013-5014 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T43 5069-5070 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T44 5535-5536 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T45 5607-5610 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T46 5620-5621 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T47 5673-5680 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T48 5714-5719 http://purl.obolibrary.org/obo/UBERON_0007688 denotes field
T49 6152-6153 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T50 6248-6255 http://purl.obolibrary.org/obo/OBI_0000968 denotes devices
T51 6326-6327 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T52 6338-6343 http://purl.obolibrary.org/obo/UBERON_0007688 denotes field
T53 6484-6490 http://purl.obolibrary.org/obo/UBERON_0000966 denotes retina
T54 7125-7126 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T55 7136-7141 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T56 7371-7372 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T57 7523-7526 http://www.ebi.ac.uk/efo/EFO_0000827 denotes eye
T58 7529-7536 http://www.ebi.ac.uk/efo/EFO_0000881 denotes Digital
T59 7554-7561 http://www.ebi.ac.uk/efo/EFO_0000881 denotes digital
T60 7602-7604 http://purl.obolibrary.org/obo/CLO_0007490 denotes m9
T61 7979-7980 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T62 8578-8583 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T63 8600-8607 http://purl.obolibrary.org/obo/NCBITaxon_33208 denotes animals

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T1 102-112 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T2 267-277 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T3 818-828 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T4 1161-1171 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T5 1186-1196 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T6 1281-1291 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T7 1433-1443 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T8 1886-1893 Chemical denotes retinal http://purl.obolibrary.org/obo/CHEBI_15035
T9 2663-2673 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T10 2747-2757 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T11 2781-2791 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T12 3757-3767 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T13 4801-4806 Chemical denotes group http://purl.obolibrary.org/obo/CHEBI_24433
T14 5376-5386 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T15 5581-5583 Chemical denotes AG http://purl.obolibrary.org/obo/CHEBI_27569|http://purl.obolibrary.org/obo/CHEBI_40618|http://purl.obolibrary.org/obo/CHEBI_73757
T18 5931-5941 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T19 6154-6160 Chemical denotes formal http://purl.obolibrary.org/obo/CHEBI_48341
T20 6906-6916 Chemical denotes ophthalmic http://purl.obolibrary.org/obo/CHEBI_66981
T21 7225-7233 Chemical denotes medicine http://purl.obolibrary.org/obo/CHEBI_23888
T22 8087-8089 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638
T23 8324-8326 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 946-954 http://purl.obolibrary.org/obo/GO_0007612 denotes learning
T2 2032-2040 http://purl.obolibrary.org/obo/GO_0007612 denotes learning
T3 3268-3276 http://purl.obolibrary.org/obo/GO_0007612 denotes learning
T4 4426-4434 http://purl.obolibrary.org/obo/GO_0007612 denotes learning
T5 6546-6554 http://purl.obolibrary.org/obo/GO_0007612 denotes learning

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T1 0-71 Sentence denotes Does the COVID-19 Pandemic Spell the End for the Direct Ophthalmoscope?
T2 73-81 Sentence denotes Abstract
T3 82-357 Sentence denotes Despite advances in ophthalmic diagnostics, the direct ophthalmoscope remains a key clinical skill taught to medical students and is the tool of choice for retina examination among non-ophthalmic physicians. However, in recent years viable alternatives have become available.
T4 358-469 Sentence denotes The coronavirus disease 2019 (COVID-19) pandemic has forced a major re-thinking in medical education worldwide.
T5 470-633 Sentence denotes In this commentary, we examined the current merits and limitations of the direct ophthalmoscope in both the clinical sense and in the context of infection control.
T6 634-838 Sentence denotes Furthermore, we compared the direct ophthalmoscope with alternatives, including commercially available portable non-mydriatic fundus cameras, that would allow a change in focus during ophthalmic teaching.
T7 839-1208 Sentence denotes We concluded that the latter will better prepare our medical students for the age of telemedicine and deep-learning systems. While the COVID-19 pandemic will not be the sole reason for the ‘death’ of the direct ophthalmoscope, the global situation will inevitably serve to expedite long overdue changes in our teaching of ophthalmic skills to non-ophthalmic physicians.
T8 1210-1228 Sentence denotes Key Summary Points
T9 1229-1332 Sentence denotes The COVID-19 pandemic necessitates a re-thinking of ophthalmic teaching for medical students worldwide.
T10 1333-1520 Sentence denotes Direct ophthalmoscopy remains a key clinical skill taught in medical schools worldwide, but for non-ophthalmic physicians it remains a difficult skill to acquire and confidently maintain.
T11 1521-1626 Sentence denotes Direct ophthalmoscopy has become even more difficult to teach online in the setting of social distancing.
T12 1627-1750 Sentence denotes In addition, the skillset itself requires close face-to-face contact with patients, placing examiners at risk of infection.
T13 1751-1920 Sentence denotes The availability of non-mydriatic portable fundus cameras allows medical educators a greater emphasis on the interpretation of salient retinal signs of systemic disease.
T14 1921-2049 Sentence denotes Furthermore, the retina findings can be objectively documented and used in both telemedicine settings and deep-learning systems.
T15 2051-2067 Sentence denotes Digital Features
T16 2068-2159 Sentence denotes This article is published with digital features to facilitate understanding of the article.
T17 2160-2238 Sentence denotes You can access the digital features on the article’s associated Figshare page.
T18 2239-2316 Sentence denotes To view digital features for this article go to 10.6084/m9.figshare.12816434.
T19 2318-2328 Sentence denotes Commentary
T20 2329-2469 Sentence denotes Ocular fundus examination with a direct ophthalmoscope has long been regarded as an essential clinical skill in medical education worldwide.
T21 2470-2577 Sentence denotes The advantages are its relatively low cost, ease of portability and large 15× magnified view of the fundus.
T22 2578-2912 Sentence denotes However, with the widespread use of binocular indirect ophthalmoscopes in specialist ophthalmic practices, the use of the direct ophthalmoscope is mostly limited to non-ophthalmic physicians to identify ophthalmic manifestations of vascular or neurological emergencies in emergency rooms, intensive care units and medical clinics [1].
T23 2913-3147 Sentence denotes For diabetic retinopathy screening in community general practices, the use of digital fundus photography since the 1990s, with its much more practical wide 45° field of view, has mostly supplanted examination by direct ophthalmoscope.
T24 3148-3307 Sentence denotes Despite direct ophthalmoscopy still being taught in medical schools around the world, it is important to note the steep learning curve associated with its use.
T25 3308-3544 Sentence denotes Often, when using the direct ophthalmoscope, medical students struggle to achieve a reasonable view of the fundus and thus are much less competent on picking up and interpreting salient signs of neurological or vascular emergencies [2].
T26 3545-3793 Sentence denotes Even with the introduction of new educational tools in the last decade, including simulators (Eyesi; VRmagic, Mannheim, Germany), there remains a general lack of confidence in direct ophthalmoscope use among non-ophthalmic physicians worldwide [3].
T27 3794-3948 Sentence denotes This article is based on previously conducted studies and does not contain any studies with human participants or animals performed by any of the authors.
T28 3949-4074 Sentence denotes The coronavirus disease 2019 (COVID-19) pandemic has posed significant challenges to medical education and clinical care [4].
T29 4075-4162 Sentence denotes During this panademic period, we identified two main issues with direct ophthalmoscopy.
T30 4163-4410 Sentence denotes First, as medical educators, we found it extremely challenging to teach direct ophthalmoscopy to medical students through videoconferencing platforms for a number of reasons, all of which we have outlined the reasons in an earlier publication [5].
T31 4411-4597 Sentence denotes In particular, learning to use a direct ophthalmoscope requires a substitute patient to practice on; when mandatory social distancing measures are in place, this is difficult to achieve.
T32 4598-4796 Sentence denotes Furthermore, and more importantly, the examination is performed with the examiner’s own face in close proximity to the patient, requiring the examiner’s own cheek to be touching the patient’s cheek.
T33 4797-5004 Sentence denotes Our group has recently reported, using ex vivo experiments, that the human conjunctiva is a potential major gateway for the severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) to enter the body [6].
T34 5005-5113 Sentence denotes This is a significant infection control issue in the context of a highly virulent and transmissible disease.
T35 5114-5398 Sentence denotes While we do not believe that the pandemic will be the sole reason for the obsolescence of the direct ophthalmoscope, it presents medical educators and clinicians worldwide with the opportunity to identify better long-term solutions for fundus examination by non-ophthalmic physicians.
T36 5399-5667 Sentence denotes The recent introduction of affordable cameras for non-mydriatic fundus photography, both portable and fixed, such as the Visuscout 100, a mobile fundus camera produced by Carl Zeiss AG (Oberkochen, Germany), has provided a unique alternative in this panademic climate.
T37 5668-5774 Sentence denotes Such devices allow for accurate, instant wide-field fundus image acquisition by the bedside or in clinics.
T38 5775-5968 Sentence denotes Rather than spend most of the time and effort on actually finding the fundus, the examiner can be properly trained in fundus photo interpretation of common ophthalmic signs of systemic disease.
T39 5969-6013 Sentence denotes There are further advantages to this method.
T40 6014-6108 Sentence denotes Firstly, proper documentation and transfer of fundus findings can be made with the images [7].
T41 6109-6226 Sentence denotes Alternatively, the images can be saved for a formal remote evaluation by an ophthalmologist for medico-legal reasons.
T42 6227-6503 Sentence denotes Newer fundus imaging devices (for example, the Optos Silverstone [Optos, Dunfermline, UK]) produce a wide 200° field of view and come with integrated swept-source optical coherence tomography, thus allowing for state-of-the-art multimodality imaging of the retina and choroid.
T43 6504-6692 Sentence denotes Furthermore, with the development of deep-learning systems for fundus pattern recognition, the images can be screened by artificial intelligence programs with high accuracy and efficiency.
T44 6693-6836 Sentence denotes An example of this is the recent validation of an artificial intelligence system in screening for papilledema in ocular fundus photographs [8].
T45 6837-7081 Sentence denotes With the COVID-19 pandemic forcing us to re-examine the way we teach ophthalmic skills to medical students, we believe this is one major area that should undergo some long overdue changes that can provide long-lasting benefits to clinical care.
T46 7082-7314 Sentence denotes In the long run, the pandemic may expedite a shift in focus that will better prepare our medical students to work in an environment where tele-medicine and artificial intelligence become increasingly important aspects of healthcare.
T47 7315-7439 Sentence denotes Despite these changes, it is important to remember that a systematic approach to patient examination will never be obsolete.
T48 7440-7527 Sentence denotes At all times we need to consider the whole patient when evaluating the back of the eye.
T49 7529-7545 Sentence denotes Digital Features
T50 7546-7623 Sentence denotes To view digital features for this article go to 10.6084/m9.figshare.12816434.
T51 7625-7641 Sentence denotes Acknowledgements
T52 7643-7650 Sentence denotes Funding
T53 7651-7736 Sentence denotes No funding or sponsorship was received for this study or publication of this article.
T54 7737-7785 Sentence denotes The Rapid Service Fee was funded by the authors.
T55 7787-7797 Sentence denotes Authorship
T56 7798-8051 Sentence denotes All named authors meet the International Committee of Medical Journal Editors (ICMJE) criteria for authorship for this article, take responsibility for the integrity of the work as a whole, and have given their approval for this version to be published.
T57 8053-8077 Sentence denotes Authorship Contributions
T58 8078-8219 Sentence denotes Kendrick Co Shih, Charlene Yat-Che Chau, Jonathan Cheuk-Hung Chan and Jasper Ka-Wai Wong were involved in writing and editing the manuscript.
T59 8220-8301 Sentence denotes Jimmy Shiu-Ming Lai was involved in editing the manuscript and in final approval.
T60 8303-8314 Sentence denotes Disclosures
T61 8315-8450 Sentence denotes Kendrick Co Shih, Jonathan Cheuk-Hung Chan, Jasper Ka-Wai Wong, Charlene Yat-Che Chau and Jimmy Shiu-Ming Lai have nothing to disclose.
T62 8452-8485 Sentence denotes Compliance with Ethics Guidelines
T63 8486-8640 Sentence denotes This article is based on previously conducted studies and does not contain any studies with human participants or animals performed by any of the authors.

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 2926-2937 Phenotype denotes retinopathy http://purl.obolibrary.org/obo/HP_0000488
T2 6791-6802 Phenotype denotes papilledema http://purl.obolibrary.org/obo/HP_0001085

2_test

Id Subject Object Predicate Lexical cue
32860621-22040169-81538554 2909-2910 22040169 denotes 1
32860621-19576494-81538555 3541-3542 19576494 denotes 2
32860621-24041982-81538556 3790-3791 24041982 denotes 3
32860621-32317790-81538557 4071-4072 32317790 denotes 4
32860621-32324929-81538558 4407-4408 32324929 denotes 5
32860621-32386571-81538559 5001-5002 32386571 denotes 6
32860621-24353924-81538560 6105-6106 24353924 denotes 7
32860621-32286748-81538561 6833-6834 32286748 denotes 8

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T1 9-17 SP_7 denotes COVID-19
T2 102-112 UBERON:0000970 denotes ophthalmic
T3 238-244 UBERON:0000966 denotes retina
T4 362-373 NCBITaxon:11118 denotes coronavirus
T5 388-396 SP_7 denotes COVID-19
T6 625-632 GO:0065007 denotes control
T7 760-766 UBERON:0003951 denotes fundus
T8 818-828 UBERON:0000970 denotes ophthalmic
T9 946-954 GO:0007612 denotes learning
T10 974-982 SP_7 denotes COVID-19
T11 1029-1034 GO:0016265 denotes death
T12 1161-1171 UBERON:0000970 denotes ophthalmic
T13 1233-1241 SP_7 denotes COVID-19
T14 1794-1800 UBERON:0003951 denotes fundus
T15 1886-1893 UBERON:0000966 denotes retinal
T16 1938-1944 UBERON:0000966 denotes retina
T17 2032-2040 GO:0007612 denotes learning
T18 2329-2342 UBERON:0003951 denotes Ocular fundus
T19 2570-2576 UBERON:0003951 denotes fundus
T20 2614-2623 UBERON:0000970 denotes binocular
T21 2663-2673 UBERON:0000970 denotes ophthalmic
T22 2747-2757 UBERON:0000970 denotes ophthalmic
T23 2781-2791 UBERON:0000970 denotes ophthalmic
T24 2822-2834 UBERON:0001016 denotes neurological
T25 2999-3005 UBERON:0003951 denotes fundus
T26 3268-3276 GO:0007612 denotes learning
T27 3415-3421 UBERON:0003951 denotes fundus
T28 3503-3515 UBERON:0001016 denotes neurological
T29 3886-3891 SP_6;NCBITaxon:9606 denotes human
T30 3908-3915 NCBITaxon:33208 denotes animals
T31 3953-3964 NCBITaxon:11118 denotes coronavirus
T32 3979-3987 SP_7 denotes COVID-19
T33 4426-4434 GO:0007612 denotes learning
T34 4686-4690 UBERON:0001456 denotes face
T35 4755-4760 UBERON:0001567 denotes cheek
T36 4790-4795 UBERON:0001567 denotes cheek
T37 4866-4871 SP_6;NCBITaxon:9606 denotes human
T38 4872-4883 UBERON:0001811 denotes conjunctiva
T39 4921-4933 SP_7 denotes severe acute
T40 4934-4945 SP_7;UBERON:0001004 denotes respiratory
T41 4946-4968 SP_7 denotes syndrome coronavirus-2
T42 4970-4980 SP_7 denotes SARS-CoV-2
T43 5037-5044 GO:0065007 denotes control
T44 5336-5345 CHEBI:75958;CHEBI:75958 denotes solutions
T45 5350-5356 UBERON:0003951 denotes fundus
T46 5463-5469 UBERON:0003951 denotes fundus
T47 5544-5550 UBERON:0003951 denotes fundus
T48 5720-5726 UBERON:0003951 denotes fundus
T49 5845-5851 UBERON:0003951 denotes fundus
T50 5931-5941 UBERON:0000970 denotes ophthalmic
T51 6060-6066 UBERON:0003951 denotes fundus
T52 6233-6239 UBERON:0003951 denotes fundus
T53 6484-6490 UBERON:0000966 denotes retina
T54 6495-6502 UBERON:0001776 denotes choroid
T55 6546-6554 GO:0007612 denotes learning
T56 6567-6573 UBERON:0003951 denotes fundus
T57 6806-6819 UBERON:0003951 denotes ocular fundus
T58 6846-6854 SP_7 denotes COVID-19
T59 7511-7515 UBERON:0001137 denotes back
T60 7523-7526 UBERON:0000970 denotes eye
T38964 9-17 SP_7 denotes COVID-19
T56140 102-112 UBERON:0000970 denotes ophthalmic
T44326 238-244 UBERON:0000966 denotes retina
T7355 362-373 NCBITaxon:11118 denotes coronavirus
T7414 388-396 SP_7 denotes COVID-19
T18472 625-632 GO:0065007 denotes control
T50021 760-766 UBERON:0003951 denotes fundus
T3214 818-828 UBERON:0000970 denotes ophthalmic
T4067 946-954 GO:0007612 denotes learning
T51707 974-982 SP_7 denotes COVID-19
T24917 1029-1034 GO:0016265 denotes death
T44329 1161-1171 UBERON:0000970 denotes ophthalmic
T12452 1233-1241 SP_7 denotes COVID-19
T64236 1794-1800 UBERON:0003951 denotes fundus
T29185 1886-1893 UBERON:0000966 denotes retinal
T26361 1938-1944 UBERON:0000966 denotes retina
T17524 2032-2040 GO:0007612 denotes learning
T90193 2329-2342 UBERON:0003951 denotes Ocular fundus
T86729 2570-2576 UBERON:0003951 denotes fundus
T83999 2614-2623 UBERON:0000970 denotes binocular
T48546 2663-2673 UBERON:0000970 denotes ophthalmic
T58633 2747-2757 UBERON:0000970 denotes ophthalmic
T47559 2781-2791 UBERON:0000970 denotes ophthalmic
T72140 2822-2834 UBERON:0001016 denotes neurological
T9014 2999-3005 UBERON:0003951 denotes fundus
T41407 3268-3276 GO:0007612 denotes learning
T74464 3415-3421 UBERON:0003951 denotes fundus
T36633 3503-3515 UBERON:0001016 denotes neurological
T34736 3886-3891 SP_6;NCBITaxon:9606 denotes human
T2485 3908-3915 NCBITaxon:33208 denotes animals
T29489 3953-3964 NCBITaxon:11118 denotes coronavirus
T90637 3979-3987 SP_7 denotes COVID-19
T82521 4426-4434 GO:0007612 denotes learning
T19264 4686-4690 UBERON:0001456 denotes face
T17168 4755-4760 UBERON:0001567 denotes cheek
T53215 4790-4795 UBERON:0001567 denotes cheek
T28740 4866-4871 SP_6;NCBITaxon:9606 denotes human
T40142 4872-4883 UBERON:0001811 denotes conjunctiva
T87622 4921-4933 SP_7 denotes severe acute
T2977 4934-4945 SP_7;UBERON:0001004 denotes respiratory
T70495 4946-4968 SP_7 denotes syndrome coronavirus-2
T56976 4970-4980 SP_7 denotes SARS-CoV-2
T76638 5037-5044 GO:0065007 denotes control
T34456 5336-5345 CHEBI:75958;CHEBI:75958 denotes solutions
T15944 5350-5356 UBERON:0003951 denotes fundus
T9380 5463-5469 UBERON:0003951 denotes fundus
T82720 5544-5550 UBERON:0003951 denotes fundus
T38955 5720-5726 UBERON:0003951 denotes fundus
T3999 5845-5851 UBERON:0003951 denotes fundus
T75652 5931-5941 UBERON:0000970 denotes ophthalmic
T69516 6060-6066 UBERON:0003951 denotes fundus
T20781 6233-6239 UBERON:0003951 denotes fundus
T62080 6484-6490 UBERON:0000966 denotes retina
T42436 6495-6502 UBERON:0001776 denotes choroid
T90141 6546-6554 GO:0007612 denotes learning
T5835 6567-6573 UBERON:0003951 denotes fundus
T28788 6806-6819 UBERON:0003951 denotes ocular fundus
T39052 6846-6854 SP_7 denotes COVID-19
T63896 7511-7515 UBERON:0001137 denotes back
T32825 7523-7526 UBERON:0000970 denotes eye

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
1 9-17 Disease denotes COVID-19 MESH:C000657245
7 362-386 Disease denotes coronavirus disease 2019 MESH:C000657245
8 388-396 Disease denotes COVID-19 MESH:C000657245
9 615-624 Disease denotes infection MESH:D007239
10 974-982 Disease denotes COVID-19 MESH:C000657245
11 1029-1034 Disease denotes death MESH:D003643
16 1701-1709 Species denotes patients Tax:9606
17 1233-1241 Disease denotes COVID-19 MESH:C000657245
18 1740-1749 Disease denotes infection MESH:D007239
19 1903-1919 Disease denotes systemic disease MESH:D034721
21 2917-2937 Disease denotes diabetic retinopathy MESH:D003920
35 4488-4495 Species denotes patient Tax:9606
36 4717-4724 Species denotes patient Tax:9606
37 4780-4787 Species denotes patient Tax:9606
38 4866-4871 Species denotes human Tax:9606
39 4921-4968 Species denotes severe acute respiratory syndrome coronavirus-2 Tax:2697049
40 4970-4980 Species denotes SARS-CoV-2 Tax:2697049
41 3953-3977 Disease denotes coronavirus disease 2019 MESH:C000657245
42 3979-3987 Disease denotes COVID-19 MESH:C000657245
43 5027-5036 Disease denotes infection MESH:D007239
49 7396-7403 Species denotes patient Tax:9606
50 7483-7490 Species denotes patient Tax:9606
51 5951-5967 Disease denotes systemic disease MESH:D034721
52 6791-6802 Disease denotes papilledema MESH:D010211
53 6846-6854 Disease denotes COVID-19 MESH:C000657245