Biotea | | NCBO annotation on full text for PMC articles. Currently including only a small set of 2811 articles corresponding to those supporting curated diesease-protein annotation from UniProt and with machine-processable full text. | 894 K | L. Garcia | | 2023-11-24 | Developing | |
bionlp-st-ge-2016-reference-eval | | | 426 | | Jin-Dong Kim | 2023-11-29 | Testing | |
LitCovid-PD-GlycoEpitope | | | 999 | | Jin-Dong Kim | 2023-11-29 | Developing | |
biosemtest | | test submitting Peregrine annotations | 35.6 K | Mark Thompson | markthompson | 2023-11-29 | Testing | |
KYMEKA20240117Test | | This is a project to express the linking of terms and ontologies (DOID, FMA, Radlex) used in the dataset 'Annotationdata_type-2' used in BLAH8_Radiological Causal Annotation. | 0 | Kyung-Min Chae | Kyung-Min Chae | 2024-01-17 | Testing | |
bionlp-st-ge-2016-spacy-parsed | | Dependency parses produced by spaCy parser, and part-of-speech tags produced by Stanford tagger (with the wsj-0-18-left3words-nodistsim model). The exact procedure is described here. Data set contains the 34 full paper articles used in the BioNLP 2016 GE task.
| 225 K | Nico Colic | Nico Colic | 2023-11-29 | Released | |
ICD10 | | Annotation for disease names as defined in ICD10 | 1.6 K | DBCLS | Jin-Dong Kim | 2023-11-29 | Developing | |
bionlp-st-ge-2016-test-tees | | NER and event extraction produced by TEES (with the default GE11 model) for the 14 full papers used in the BioNLP 2016 GE task test corpus. | 9.17 K | Nico Colic | Nico Colic | 2023-11-29 | Released | |
bionlp-st-ge-2016-reference-tees | | NER and event extraction produced by TEES (with the default GE11 model) for the 20 full papers used in the BioNLP 2016 GE task reference corpus. | 14.6 K | Nico Colic | Nico Colic | 2023-11-29 | Released | |
BioNLP16_DUT | | | 6.5 K | | Messiy | 2023-11-29 | Testing | |
BioNLP16_Messiy | | | 6.5 K | | Messiy | 2023-11-29 | Testing | |
Glycosmos6-MAT | | Automatic annotation by PD-MAT. | 263 K | | Jin-Dong Kim | 2023-11-29 | Developing | |
bionlp-st-ge-2016-test-ihmc | | | 14.4 K | Lucian Galescu | | 2023-11-29 | Testing | |
GlycosmosP-GlycoEpitope | | | 24 | | Jin-Dong Kim | 2023-11-29 | Testing | |
sentences | | Sentence segmentation annotation.
Automatic annotation by TextSentencer. | 6.96 M | DBCLS | Jin-Dong Kim | 2023-11-24 | Developing | |
Test-Documents | | | 1 | | Jin-Dong Kim | 2023-11-24 | | |
GlyCosmosP-Glycan-Motif | | | 8 | | Jin-Dong Kim | 2023-11-24 | Developing | |
tees-test | | Random PMC document used for testing during the development of a RESTful TEES parsing web service. | 3.39 K | Nico Colic | Nico Colic | 2023-11-24 | Developing | |
Kymeka_cho_test | | | 583 | | davidecho | 2024-01-18 | | |
MENA-example2 | | | 3 | | Jin-Dong Kim | 2023-11-24 | Testing | |