| PA-LLM | | 🖐️ LLMs for biomedical text summarisation | 0 | | Nico Colic | 2024-01-19 | Developing | |
| PA-LLM-test | | | 0 | | Nico Colic | 2024-01-19 | Testing | |
| Parkinson | | | 54 | | Jin-Dong Kim | 2023-11-28 | Testing | |
| performance-test | | a project for performance test | 480 K | | Jin-Dong Kim | 2023-11-27 | Testing | |
| pmc-enju-pas | | Predicate-argument structure annotation produced by Enju.
This data set is initially produced as a supporting resource for BioNLP-ST 2016 GE task.
As so, it currently includes the 34 full paper articles that are in the benchmark data sets of GE 2016 task, reference data set (bionlp-st-ge-2016-reference) and test data set (bionlp-st-ge-2016-test), but will be extended to include more papers from the PubMed Central Open Access subset (PMCOA).
| 205 K | DBCLS | Jin-Dong Kim | 2023-11-28 | Developing | |
| PMID_GLOBAL | | Global sentencer tagging of public PMID abstracts.
Open and publicly available to the global community. | 2.24 M | | alo33 | 2023-11-24 | Developing | |
| Preeclampsia | | A collection of titles and abstracts of "Preeclampsia"-related papers. They were extracted from PubMed using the MeSH term "Preeclampsia" and specifying the language to be "English, on 11th September, 2017.
The texts were then annotated by PubDictionaries using the dictionary "Preeclampsia". | 58.7 K | | callahan_tiff | 2023-11-29 | Developing | |
| Preeclampsia-compare | | | 67.2 K | | Jin-Dong Kim | 2023-11-29 | Testing | |
| preeclampsia_genes | | | 17.8 K | | Jin-Dong Kim | 2023-11-29 | Developing | |
| PT_NER_NEL | | Annotations in Portuguese COVID-19 related abstracts from MeSH terminology | 245 | LASIGE-DeST | pruas_18 | 2023-11-29 | Developing | |
| PubCasesCollection | | abstracts in PubCases | 0 | | Jin-Dong Kim | 2023-11-29 | | |
| PubCasesHPO | | HPO annotation in PubCases | 3.18 M | | Toyofumi Fujiwara | 2023-11-24 | Beta | |
| PubCasesORDO | | ORDO annotation in PubCases | 865 K | | Toyofumi Fujiwara | 2023-11-24 | Beta | |
| PubMed-2000 | | abstracts published in 2000. | 0 | | Jin-Dong Kim | 2023-11-29 | Developing | |
| pubmed-2016 | | abstracts published in 2016 | 0 | | Jin-Dong Kim | 2023-11-28 | | |
| PubMed-2017 | | abstracts published in 2017. | 0 | | Jin-Dong Kim | 2023-11-24 | Developing | |
| PubMed_ArguminSci | | Predictions for PubMed automatically extracted with the ArguminSci tool (https://github.com/anlausch/ArguminSci). | 777 K | | zebet | 2023-11-24 | Released | |
| pubmed-enju-pas | | Annotating PubMed abstracts for predicate-argument structure (PAS). Enju 2.4.2 is used to automatically compute PAS. | 19.1 M | Enju | Jin-Dong Kim | 2023-11-24 | Developing | |
| PubMed-French-test | | A collection of PubMed abstract written in French | 0 | | Jin-Dong Kim | 2023-11-29 | Developing | |
| PubMed-German-test | | A collection of PubMed abstracts which are written in German | 0 | | Jin-Dong Kim | 2023-11-24 | Developing | |
