Id |
Subject |
Object |
Predicate |
Lexical cue |
T4605 |
0-2 |
TO |
denotes |
To |
T4606 |
3-14 |
VB |
denotes |
investigate |
T4608 |
15-18 |
DT |
denotes |
the |
T4609 |
19-23 |
NN |
denotes |
role |
T4610 |
24-26 |
IN |
denotes |
of |
T4611 |
27-30 |
NN |
denotes |
Apc |
T4612 |
31-33 |
IN |
denotes |
in |
T4613 |
34-45 |
NN |
denotes |
development |
T4614 |
46-48 |
IN |
denotes |
of |
T4615 |
49-53 |
NN |
denotes |
skin |
T4616 |
54-57 |
CC |
denotes |
and |
T4617 |
58-61 |
PRP$ |
denotes |
its |
T4618 |
62-72 |
NNS |
denotes |
appendages |
T4619 |
72-74 |
, |
denotes |
, |
T4620 |
74-76 |
PRP |
denotes |
we |
T4607 |
77-81 |
VBD |
denotes |
used |
T4621 |
82-85 |
DT |
denotes |
the |
T4623 |
86-89 |
NN |
denotes |
Cre |
T4625 |
89-90 |
HYPH |
denotes |
/ |
T4624 |
90-94 |
NN |
denotes |
loxP |
T4622 |
95-105 |
NN |
denotes |
technology |
T4626 |
106-108 |
TO |
denotes |
to |
T4627 |
109-118 |
VB |
denotes |
introduce |
T4628 |
119-120 |
DT |
denotes |
a |
T4630 |
121-132 |
JJ |
denotes |
conditional |
T4629 |
133-141 |
NN |
denotes |
mutation |
T4631 |
142-144 |
IN |
denotes |
of |
T4632 |
145-148 |
DT |
denotes |
the |
T4634 |
149-152 |
NN |
denotes |
Apc |
T4633 |
153-157 |
NN |
denotes |
gene |
T4635 |
158-160 |
IN |
denotes |
in |
T4636 |
161-165 |
NNS |
denotes |
mice |
T4637 |
165-166 |
. |
denotes |
. |
T4638 |
166-466 |
sentence |
denotes |
We constructed embryonic stem (ES) cells and mice carrying an Apc allele harboring both a pair of loxP sites flanking Apc exon 14 and a pair of FLP recognition target (FRT) sites flanking PGK-neomycin selection cassette by recombineering [12,13] (Figure 1A, ApcCKON allele, N for neomycin cassette). |
T4639 |
167-169 |
PRP |
denotes |
We |
T4640 |
170-181 |
VBD |
denotes |
constructed |
T4641 |
182-191 |
JJ |
denotes |
embryonic |
T4642 |
192-196 |
NN |
denotes |
stem |
T4644 |
197-198 |
-LRB- |
denotes |
( |
T4645 |
198-200 |
NN |
denotes |
ES |
T4646 |
200-201 |
-RRB- |
denotes |
) |
T4643 |
202-207 |
NNS |
denotes |
cells |
T4647 |
208-211 |
CC |
denotes |
and |
T4648 |
212-216 |
NNS |
denotes |
mice |
T4649 |
217-225 |
VBG |
denotes |
carrying |
T4650 |
226-228 |
DT |
denotes |
an |
T4652 |
229-232 |
NN |
denotes |
Apc |
T4651 |
233-239 |
NN |
denotes |
allele |
T4653 |
240-249 |
VBG |
denotes |
harboring |
T4654 |
250-254 |
CC |
denotes |
both |
T4656 |
255-256 |
DT |
denotes |
a |
T4655 |
257-261 |
NN |
denotes |
pair |
T4657 |
262-264 |
IN |
denotes |
of |
T4658 |
265-269 |
NN |
denotes |
loxP |
T4659 |
270-275 |
NNS |
denotes |
sites |
T4660 |
276-284 |
VBG |
denotes |
flanking |
T4661 |
285-288 |
NN |
denotes |
Apc |
T4662 |
289-293 |
NN |
denotes |
exon |
T4663 |
294-296 |
CD |
denotes |
14 |
T4664 |
297-300 |
CC |
denotes |
and |
T4665 |
301-302 |
DT |
denotes |
a |
T4666 |
303-307 |
NN |
denotes |
pair |
T4667 |
308-310 |
IN |
denotes |
of |
T4668 |
311-314 |
NN |
denotes |
FLP |
T4670 |
315-326 |
NN |
denotes |
recognition |
T4669 |
327-333 |
NN |
denotes |
target |
T4672 |
334-335 |
-LRB- |
denotes |
( |
T4673 |
335-338 |
NN |
denotes |
FRT |
T4674 |
338-339 |
-RRB- |
denotes |
) |
T4671 |
340-345 |
NNS |
denotes |
sites |
T4675 |
346-354 |
VBG |
denotes |
flanking |
T4676 |
355-358 |
NN |
denotes |
PGK |
T4678 |
358-359 |
HYPH |
denotes |
- |
T4677 |
359-367 |
NN |
denotes |
neomycin |
T4680 |
368-377 |
NN |
denotes |
selection |
T4679 |
378-386 |
NN |
denotes |
cassette |
T4681 |
387-389 |
IN |
denotes |
by |
T4682 |
390-404 |
VBG |
denotes |
recombineering |
T4683 |
405-406 |
-LRB- |
denotes |
[ |
T4685 |
406-408 |
CD |
denotes |
12 |
T4686 |
408-409 |
, |
denotes |
, |
T4684 |
409-411 |
CD |
denotes |
13 |
T4687 |
411-412 |
-RRB- |
denotes |
] |
T4688 |
413-414 |
-LRB- |
denotes |
( |
T4690 |
414-420 |
NN |
denotes |
Figure |
T4691 |
421-423 |
NN |
denotes |
1A |
T4692 |
423-425 |
, |
denotes |
, |
T4693 |
425-432 |
NN |
denotes |
ApcCKON |
T4694 |
433-439 |
NN |
denotes |
allele |
T4695 |
439-441 |
, |
denotes |
, |
T4689 |
441-442 |
NN |
denotes |
N |
T4696 |
443-446 |
IN |
denotes |
for |
T4697 |
447-455 |
NN |
denotes |
neomycin |
T4698 |
456-464 |
NN |
denotes |
cassette |
T4699 |
464-465 |
-RRB- |
denotes |
) |
T4700 |
465-466 |
. |
denotes |
. |
T4701 |
466-587 |
sentence |
denotes |
A PGK-neomycin cassette was inserted in the same transcriptional orientation as Apc in intron 14 of the endogenous gene. |
T4702 |
467-468 |
DT |
denotes |
A |
T4704 |
469-472 |
NN |
denotes |
PGK |
T4706 |
472-473 |
HYPH |
denotes |
- |
T4705 |
473-481 |
NN |
denotes |
neomycin |
T4703 |
482-490 |
NN |
denotes |
cassette |
T4708 |
491-494 |
VBD |
denotes |
was |
T4707 |
495-503 |
VBN |
denotes |
inserted |
T4709 |
504-506 |
IN |
denotes |
in |
T4710 |
507-510 |
DT |
denotes |
the |
T4712 |
511-515 |
JJ |
denotes |
same |
T4713 |
516-531 |
JJ |
denotes |
transcriptional |
T4711 |
532-543 |
NN |
denotes |
orientation |
T4714 |
544-546 |
IN |
denotes |
as |
T4715 |
547-550 |
NN |
denotes |
Apc |
T4716 |
551-553 |
IN |
denotes |
in |
T4717 |
554-560 |
NN |
denotes |
intron |
T4718 |
561-563 |
CD |
denotes |
14 |
T4719 |
564-566 |
IN |
denotes |
of |
T4720 |
567-570 |
DT |
denotes |
the |
T4722 |
571-581 |
JJ |
denotes |
endogenous |
T4721 |
582-586 |
NN |
denotes |
gene |
T4723 |
586-587 |
. |
denotes |
. |
T4724 |
587-665 |
sentence |
denotes |
The loxP and FRT sites were used to aid unidirectional recombination [12,13]. |
T4725 |
588-591 |
DT |
denotes |
The |
T4727 |
592-596 |
NN |
denotes |
loxP |
T4728 |
597-600 |
CC |
denotes |
and |
T4729 |
601-604 |
NN |
denotes |
FRT |
T4726 |
605-610 |
NNS |
denotes |
sites |
T4731 |
611-615 |
VBD |
denotes |
were |
T4730 |
616-620 |
VBN |
denotes |
used |
T4732 |
621-623 |
TO |
denotes |
to |
T4733 |
624-627 |
VB |
denotes |
aid |
T4734 |
628-642 |
JJ |
denotes |
unidirectional |
T4735 |
643-656 |
NN |
denotes |
recombination |
T4736 |
657-658 |
-LRB- |
denotes |
[ |
T4738 |
658-660 |
CD |
denotes |
12 |
T4739 |
660-661 |
, |
denotes |
, |
T4737 |
661-663 |
CD |
denotes |
13 |
T4740 |
663-664 |
-RRB- |
denotes |
] |
T4741 |
664-665 |
. |
denotes |
. |
T4742 |
665-815 |
sentence |
denotes |
Two mouse lines containing the same modification were generated from two independent ES clones to ensure that these two lines behave in the same way. |
T4743 |
666-669 |
CD |
denotes |
Two |
T4745 |
670-675 |
NN |
denotes |
mouse |
T4744 |
676-681 |
NNS |
denotes |
lines |
T4747 |
682-692 |
VBG |
denotes |
containing |
T4748 |
693-696 |
DT |
denotes |
the |
T4750 |
697-701 |
JJ |
denotes |
same |
T4749 |
702-714 |
NN |
denotes |
modification |
T4751 |
715-719 |
VBD |
denotes |
were |
T4746 |
720-729 |
VBN |
denotes |
generated |
T4752 |
730-734 |
IN |
denotes |
from |
T4753 |
735-738 |
CD |
denotes |
two |
T4755 |
739-750 |
JJ |
denotes |
independent |
T4756 |
751-753 |
NN |
denotes |
ES |
T4754 |
754-760 |
NNS |
denotes |
clones |
T4757 |
761-763 |
TO |
denotes |
to |
T4758 |
764-770 |
VB |
denotes |
ensure |
T4759 |
771-775 |
IN |
denotes |
that |
T4761 |
776-781 |
DT |
denotes |
these |
T4763 |
782-785 |
CD |
denotes |
two |
T4762 |
786-791 |
NNS |
denotes |
lines |
T4760 |
792-798 |
VBP |
denotes |
behave |
T4764 |
799-801 |
IN |
denotes |
in |
T4765 |
802-805 |
DT |
denotes |
the |
T4767 |
806-810 |
JJ |
denotes |
same |
T4766 |
811-814 |
NN |
denotes |
way |
T4768 |
814-815 |
. |
denotes |
. |
T4769 |
815-1067 |
sentence |
denotes |
These ApcCKON/+ mice were crossed with FLPe-deleter to generate ApcCKO/+ mice that were heterozygous for the final Apc conditional (ApcCKO) allele that removed the PGK-neomycin cassette and contains only the loxP sites in the introns flanking exon 14. |
T4770 |
816-821 |
DT |
denotes |
These |
T4772 |
822-829 |
NN |
denotes |
ApcCKON |
T4773 |
829-830 |
HYPH |
denotes |
/ |
T4774 |
830-831 |
SYM |
denotes |
+ |
T4771 |
832-836 |
NNS |
denotes |
mice |
T4776 |
837-841 |
VBD |
denotes |
were |
T4775 |
842-849 |
VBN |
denotes |
crossed |
T4777 |
850-854 |
IN |
denotes |
with |
T4778 |
855-859 |
NN |
denotes |
FLPe |
T4780 |
859-860 |
HYPH |
denotes |
- |
T4779 |
860-867 |
NN |
denotes |
deleter |
T4781 |
868-870 |
TO |
denotes |
to |
T4782 |
871-879 |
VB |
denotes |
generate |
T4783 |
880-886 |
NN |
denotes |
ApcCKO |
T4785 |
886-887 |
HYPH |
denotes |
/ |
T4786 |
887-888 |
SYM |
denotes |
+ |
T4784 |
889-893 |
NNS |
denotes |
mice |
T4787 |
894-898 |
WDT |
denotes |
that |
T4788 |
899-903 |
VBD |
denotes |
were |
T4789 |
904-916 |
JJ |
denotes |
heterozygous |
T4790 |
917-920 |
IN |
denotes |
for |
T4791 |
921-924 |
DT |
denotes |
the |
T4793 |
925-930 |
JJ |
denotes |
final |
T4794 |
931-934 |
NN |
denotes |
Apc |
T4795 |
935-946 |
JJ |
denotes |
conditional |
T4796 |
947-948 |
-LRB- |
denotes |
( |
T4797 |
948-954 |
NN |
denotes |
ApcCKO |
T4798 |
954-955 |
-RRB- |
denotes |
) |
T4792 |
956-962 |
NN |
denotes |
allele |
T4799 |
963-967 |
WDT |
denotes |
that |
T4800 |
968-975 |
VBD |
denotes |
removed |
T4801 |
976-979 |
DT |
denotes |
the |
T4803 |
980-983 |
NN |
denotes |
PGK |
T4805 |
983-984 |
HYPH |
denotes |
- |
T4804 |
984-992 |
NN |
denotes |
neomycin |
T4802 |
993-1001 |
NN |
denotes |
cassette |
T4806 |
1002-1005 |
CC |
denotes |
and |
T4807 |
1006-1014 |
VBZ |
denotes |
contains |
T4808 |
1015-1019 |
RB |
denotes |
only |
T4810 |
1020-1023 |
DT |
denotes |
the |
T4811 |
1024-1028 |
NN |
denotes |
loxP |
T4809 |
1029-1034 |
NNS |
denotes |
sites |
T4812 |
1035-1037 |
IN |
denotes |
in |
T4813 |
1038-1041 |
DT |
denotes |
the |
T4814 |
1042-1049 |
NNS |
denotes |
introns |
T4815 |
1050-1058 |
VBG |
denotes |
flanking |
T4816 |
1059-1063 |
NN |
denotes |
exon |
T4817 |
1064-1066 |
CD |
denotes |
14 |
T4818 |
1066-1067 |
. |
denotes |
. |
T4819 |
1067-1248 |
sentence |
denotes |
To assess the effect of deleting exon 14 in mice, both lines of ApcCKO/+ mice were crossed with the Cre-deleter to generate the germline knockout line of Apc, designated ApcΔ580/+. |
T4820 |
1068-1070 |
TO |
denotes |
To |
T4821 |
1071-1077 |
VB |
denotes |
assess |
T4823 |
1078-1081 |
DT |
denotes |
the |
T4824 |
1082-1088 |
NN |
denotes |
effect |
T4825 |
1089-1091 |
IN |
denotes |
of |
T4826 |
1092-1100 |
VBG |
denotes |
deleting |
T4827 |
1101-1105 |
NN |
denotes |
exon |
T4828 |
1106-1108 |
CD |
denotes |
14 |
T4829 |
1109-1111 |
IN |
denotes |
in |
T4830 |
1112-1116 |
NNS |
denotes |
mice |
T4831 |
1116-1118 |
, |
denotes |
, |
T4832 |
1118-1122 |
DT |
denotes |
both |
T4833 |
1123-1128 |
NNS |
denotes |
lines |
T4834 |
1129-1131 |
IN |
denotes |
of |
T4835 |
1132-1138 |
NN |
denotes |
ApcCKO |
T4837 |
1138-1139 |
HYPH |
denotes |
/ |
T4838 |
1139-1140 |
SYM |
denotes |
+ |
T4836 |
1141-1145 |
NNS |
denotes |
mice |
T4839 |
1146-1150 |
VBD |
denotes |
were |
T4822 |
1151-1158 |
VBN |
denotes |
crossed |
T4840 |
1159-1163 |
IN |
denotes |
with |
T4841 |
1164-1167 |
DT |
denotes |
the |
T4843 |
1168-1171 |
NN |
denotes |
Cre |
T4844 |
1171-1172 |
HYPH |
denotes |
- |
T4842 |
1172-1179 |
NN |
denotes |
deleter |
T4845 |
1180-1182 |
TO |
denotes |
to |
T4846 |
1183-1191 |
VB |
denotes |
generate |
T4847 |
1192-1195 |
DT |
denotes |
the |
T4849 |
1196-1204 |
NN |
denotes |
germline |
T4850 |
1205-1213 |
NN |
denotes |
knockout |
T4848 |
1214-1218 |
NN |
denotes |
line |
T4851 |
1219-1221 |
IN |
denotes |
of |
T4852 |
1222-1225 |
NNP |
denotes |
Apc |
T4853 |
1225-1227 |
, |
denotes |
, |
T4854 |
1227-1237 |
VBN |
denotes |
designated |
T4855 |
1238-1245 |
NN |
denotes |
ApcΔ580 |
T4856 |
1245-1246 |
HYPH |
denotes |
/ |
T4857 |
1246-1247 |
SYM |
denotes |
+ |
T4858 |
1247-1248 |
. |
denotes |
. |
T4859 |
1248-1303 |
sentence |
denotes |
The mutant allele (ApcΔ580) lacks exon 14 (Figure 1A). |
T4860 |
1249-1252 |
DT |
denotes |
The |
T4862 |
1253-1259 |
JJ |
denotes |
mutant |
T4861 |
1260-1266 |
NN |
denotes |
allele |
T4864 |
1267-1268 |
-LRB- |
denotes |
( |
T4865 |
1268-1275 |
NN |
denotes |
ApcΔ580 |
T4866 |
1275-1276 |
-RRB- |
denotes |
) |
T4863 |
1277-1282 |
VBZ |
denotes |
lacks |
T4867 |
1283-1287 |
NN |
denotes |
exon |
T4868 |
1288-1290 |
CD |
denotes |
14 |
T4869 |
1291-1292 |
-LRB- |
denotes |
( |
T4871 |
1292-1298 |
NN |
denotes |
Figure |
T4870 |
1299-1301 |
NN |
denotes |
1A |
T4872 |
1301-1302 |
-RRB- |
denotes |
) |
T4873 |
1302-1303 |
. |
denotes |
. |
T4874 |
1303-1586 |
sentence |
denotes |
The transcript from loss of exon 14 results in a shift in the normal reading frame, resulting in a premature chain termination codon which, if utilized, would result in a truncated polypeptide that is 605 aa in length, of which the first 580 aa correspond to the normal Apc protein. |
T4875 |
1304-1307 |
DT |
denotes |
The |
T4876 |
1308-1318 |
NN |
denotes |
transcript |
T4878 |
1319-1323 |
IN |
denotes |
from |
T4879 |
1324-1328 |
NN |
denotes |
loss |
T4880 |
1329-1331 |
IN |
denotes |
of |
T4881 |
1332-1336 |
NN |
denotes |
exon |
T4882 |
1337-1339 |
CD |
denotes |
14 |
T4877 |
1340-1347 |
VBZ |
denotes |
results |
T4883 |
1348-1350 |
IN |
denotes |
in |
T4884 |
1351-1352 |
DT |
denotes |
a |
T4885 |
1353-1358 |
NN |
denotes |
shift |
T4886 |
1359-1361 |
IN |
denotes |
in |
T4887 |
1362-1365 |
DT |
denotes |
the |
T4889 |
1366-1372 |
JJ |
denotes |
normal |
T4890 |
1373-1380 |
NN |
denotes |
reading |
T4888 |
1381-1386 |
NN |
denotes |
frame |
T4891 |
1386-1388 |
, |
denotes |
, |
T4892 |
1388-1397 |
VBG |
denotes |
resulting |
T4893 |
1398-1400 |
IN |
denotes |
in |
T4894 |
1401-1402 |
DT |
denotes |
a |
T4896 |
1403-1412 |
JJ |
denotes |
premature |
T4897 |
1413-1418 |
NN |
denotes |
chain |
T4898 |
1419-1430 |
NN |
denotes |
termination |
T4895 |
1431-1436 |
NN |
denotes |
codon |
T4899 |
1437-1442 |
WDT |
denotes |
which |
T4901 |
1442-1444 |
, |
denotes |
, |
T4902 |
1444-1446 |
IN |
denotes |
if |
T4903 |
1447-1455 |
VBN |
denotes |
utilized |
T4904 |
1455-1457 |
, |
denotes |
, |
T4905 |
1457-1462 |
MD |
denotes |
would |
T4900 |
1463-1469 |
VB |
denotes |
result |
T4906 |
1470-1472 |
IN |
denotes |
in |
T4907 |
1473-1474 |
DT |
denotes |
a |
T4909 |
1475-1484 |
VBN |
denotes |
truncated |
T4908 |
1485-1496 |
NN |
denotes |
polypeptide |
T4910 |
1497-1501 |
WDT |
denotes |
that |
T4911 |
1502-1504 |
VBZ |
denotes |
is |
T4912 |
1505-1508 |
CD |
denotes |
605 |
T4913 |
1509-1511 |
NNS |
denotes |
aa |
T4914 |
1512-1514 |
IN |
denotes |
in |
T4915 |
1515-1521 |
NN |
denotes |
length |
T4916 |
1521-1523 |
, |
denotes |
, |
T4917 |
1523-1525 |
IN |
denotes |
of |
T4919 |
1526-1531 |
WDT |
denotes |
which |
T4920 |
1532-1535 |
DT |
denotes |
the |
T4922 |
1536-1541 |
JJ |
denotes |
first |
T4923 |
1542-1545 |
CD |
denotes |
580 |
T4921 |
1546-1548 |
NNS |
denotes |
aa |
T4918 |
1549-1559 |
VBP |
denotes |
correspond |
T4924 |
1560-1562 |
IN |
denotes |
to |
T4925 |
1563-1566 |
DT |
denotes |
the |
T4927 |
1567-1573 |
JJ |
denotes |
normal |
T4928 |
1574-1577 |
NN |
denotes |
Apc |
T4926 |
1578-1585 |
NN |
denotes |
protein |
T4929 |
1585-1586 |
. |
denotes |
. |
R1000 |
T4684 |
T4640 |
parataxis |
13,constructed |
R1001 |
T4685 |
T4684 |
nummod |
12,13 |
R1002 |
T4686 |
T4684 |
punct |
",",13 |
R1003 |
T4687 |
T4684 |
punct |
],13 |
R1004 |
T4688 |
T4689 |
punct |
(,N |
R1005 |
T4689 |
T4640 |
parataxis |
N,constructed |
R1006 |
T4690 |
T4691 |
compound |
Figure,1A |
R1007 |
T4691 |
T4689 |
dep |
1A,N |
R1008 |
T4692 |
T4689 |
punct |
", ",N |
R1009 |
T4693 |
T4694 |
compound |
ApcCKON,allele |
R1010 |
T4694 |
T4689 |
dep |
allele,N |
R1011 |
T4695 |
T4689 |
punct |
", ",N |
R1012 |
T4696 |
T4689 |
prep |
for,N |
R1013 |
T4697 |
T4698 |
compound |
neomycin,cassette |
R1014 |
T4698 |
T4696 |
pobj |
cassette,for |
R1015 |
T4699 |
T4689 |
punct |
),N |
R1016 |
T4700 |
T4640 |
punct |
.,constructed |
R1017 |
T4702 |
T4703 |
det |
A,cassette |
R1018 |
T4703 |
T4707 |
nsubjpass |
cassette,inserted |
R1019 |
T4704 |
T4705 |
compound |
PGK,neomycin |
R1020 |
T4705 |
T4703 |
compound |
neomycin,cassette |
R1021 |
T4706 |
T4705 |
punct |
-,neomycin |
R1022 |
T4708 |
T4707 |
auxpass |
was,inserted |
R1023 |
T4709 |
T4707 |
prep |
in,inserted |
R1024 |
T4710 |
T4711 |
det |
the,orientation |
R1025 |
T4711 |
T4709 |
pobj |
orientation,in |
R1026 |
T4712 |
T4711 |
amod |
same,orientation |
R1027 |
T4713 |
T4711 |
amod |
transcriptional,orientation |
R1028 |
T4714 |
T4711 |
prep |
as,orientation |
R1029 |
T4715 |
T4714 |
pobj |
Apc,as |
R1030 |
T4716 |
T4707 |
prep |
in,inserted |
R1031 |
T4717 |
T4716 |
pobj |
intron,in |
R1032 |
T4718 |
T4717 |
nummod |
14,intron |
R1033 |
T4719 |
T4717 |
prep |
of,intron |
R1034 |
T4720 |
T4721 |
det |
the,gene |
R1035 |
T4721 |
T4719 |
pobj |
gene,of |
R1036 |
T4722 |
T4721 |
amod |
endogenous,gene |
R1037 |
T4723 |
T4707 |
punct |
.,inserted |
R1038 |
T4725 |
T4726 |
det |
The,sites |
R1039 |
T4726 |
T4730 |
nsubjpass |
sites,used |
R1040 |
T4727 |
T4726 |
nmod |
loxP,sites |
R1041 |
T4728 |
T4727 |
cc |
and,loxP |
R1042 |
T4729 |
T4727 |
conj |
FRT,loxP |
R1043 |
T4731 |
T4730 |
auxpass |
were,used |
R1044 |
T4732 |
T4733 |
aux |
to,aid |
R1045 |
T4733 |
T4730 |
advcl |
aid,used |
R1046 |
T4734 |
T4735 |
amod |
unidirectional,recombination |
R1047 |
T4735 |
T4733 |
dobj |
recombination,aid |
R1048 |
T4736 |
T4737 |
punct |
[,13 |
R1049 |
T4737 |
T4730 |
parataxis |
13,used |
R1050 |
T4738 |
T4737 |
nummod |
12,13 |
R1051 |
T4739 |
T4737 |
punct |
",",13 |
R1052 |
T4740 |
T4737 |
punct |
],13 |
R1053 |
T4741 |
T4730 |
punct |
.,used |
R1054 |
T4743 |
T4744 |
nummod |
Two,lines |
R1055 |
T4744 |
T4746 |
nsubjpass |
lines,generated |
R1056 |
T4745 |
T4744 |
compound |
mouse,lines |
R1057 |
T4747 |
T4744 |
acl |
containing,lines |
R1058 |
T4748 |
T4749 |
det |
the,modification |
R1059 |
T4749 |
T4747 |
dobj |
modification,containing |
R1060 |
T4750 |
T4749 |
amod |
same,modification |
R1061 |
T4751 |
T4746 |
auxpass |
were,generated |
R1062 |
T4752 |
T4746 |
prep |
from,generated |
R1063 |
T4753 |
T4754 |
nummod |
two,clones |
R1064 |
T4754 |
T4752 |
pobj |
clones,from |
R1065 |
T4755 |
T4754 |
amod |
independent,clones |
R1066 |
T4756 |
T4754 |
compound |
ES,clones |
R1067 |
T4757 |
T4758 |
aux |
to,ensure |
R1068 |
T4758 |
T4746 |
advcl |
ensure,generated |
R1069 |
T4759 |
T4760 |
mark |
that,behave |
R1070 |
T4760 |
T4758 |
ccomp |
behave,ensure |
R1071 |
T4761 |
T4762 |
det |
these,lines |
R1072 |
T4762 |
T4760 |
nsubj |
lines,behave |
R1073 |
T4763 |
T4762 |
nummod |
two,lines |
R1074 |
T4764 |
T4760 |
prep |
in,behave |
R1075 |
T4765 |
T4766 |
det |
the,way |
R1076 |
T4766 |
T4764 |
pobj |
way,in |
R1077 |
T4767 |
T4766 |
amod |
same,way |
R1078 |
T4768 |
T4746 |
punct |
.,generated |
R1079 |
T4770 |
T4771 |
det |
These,mice |
R1080 |
T4771 |
T4775 |
nsubjpass |
mice,crossed |
R1081 |
T4772 |
T4771 |
nmod |
ApcCKON,mice |
R1082 |
T4773 |
T4772 |
punct |
/,ApcCKON |
R1083 |
T4774 |
T4772 |
punct |
+,ApcCKON |
R1084 |
T4776 |
T4775 |
auxpass |
were,crossed |
R1085 |
T4777 |
T4775 |
prep |
with,crossed |
R1086 |
T4778 |
T4779 |
compound |
FLPe,deleter |
R1087 |
T4779 |
T4777 |
pobj |
deleter,with |
R1088 |
T4780 |
T4779 |
punct |
-,deleter |
R1089 |
T4781 |
T4782 |
aux |
to,generate |
R1090 |
T4782 |
T4775 |
advcl |
generate,crossed |
R1091 |
T4783 |
T4784 |
nmod |
ApcCKO,mice |
R1092 |
T4784 |
T4782 |
dobj |
mice,generate |
R1093 |
T4785 |
T4783 |
punct |
/,ApcCKO |
R1094 |
T4786 |
T4783 |
punct |
+,ApcCKO |
R1095 |
T4787 |
T4788 |
dep |
that,were |
R1096 |
T4788 |
T4784 |
relcl |
were,mice |
R1097 |
T4789 |
T4788 |
acomp |
heterozygous,were |
R1098 |
T4790 |
T4789 |
prep |
for,heterozygous |
R1099 |
T4791 |
T4792 |
det |
the,allele |
R1100 |
T4792 |
T4790 |
pobj |
allele,for |
R1101 |
T4793 |
T4792 |
amod |
final,allele |
R1102 |
T4794 |
T4795 |
npadvmod |
Apc,conditional |
R1103 |
T4795 |
T4792 |
amod |
conditional,allele |
R1104 |
T4796 |
T4797 |
punct |
(,ApcCKO |
R1105 |
T4797 |
T4795 |
parataxis |
ApcCKO,conditional |
R1106 |
T4798 |
T4797 |
punct |
),ApcCKO |
R1107 |
T4799 |
T4800 |
dep |
that,removed |
R1108 |
T4800 |
T4792 |
relcl |
removed,allele |
R1109 |
T4801 |
T4802 |
det |
the,cassette |
R1110 |
T4802 |
T4800 |
dobj |
cassette,removed |
R1111 |
T4803 |
T4804 |
compound |
PGK,neomycin |
R1112 |
T4804 |
T4802 |
compound |
neomycin,cassette |
R1113 |
T4805 |
T4804 |
punct |
-,neomycin |
R1114 |
T4806 |
T4800 |
cc |
and,removed |
R1115 |
T4807 |
T4800 |
conj |
contains,removed |
R1116 |
T4808 |
T4809 |
advmod |
only,sites |
R1117 |
T4809 |
T4807 |
dobj |
sites,contains |
R1118 |
T4810 |
T4809 |
det |
the,sites |
R1119 |
T4811 |
T4809 |
compound |
loxP,sites |
R1120 |
T4812 |
T4807 |
prep |
in,contains |
R1121 |
T4813 |
T4814 |
det |
the,introns |
R1122 |
T4814 |
T4812 |
pobj |
introns,in |
R1123 |
T4815 |
T4814 |
acl |
flanking,introns |
R1124 |
T4816 |
T4815 |
dobj |
exon,flanking |
R1125 |
T4817 |
T4816 |
nummod |
14,exon |
R1126 |
T4818 |
T4775 |
punct |
.,crossed |
R1127 |
T4820 |
T4821 |
aux |
To,assess |
R1128 |
T4821 |
T4822 |
advcl |
assess,crossed |
R1129 |
T4823 |
T4824 |
det |
the,effect |
R1130 |
T4824 |
T4821 |
dobj |
effect,assess |
R1131 |
T4825 |
T4824 |
prep |
of,effect |
R1132 |
T4826 |
T4825 |
pcomp |
deleting,of |
R1133 |
T4827 |
T4826 |
dobj |
exon,deleting |
R1134 |
T4828 |
T4827 |
nummod |
14,exon |
R1135 |
T4829 |
T4821 |
prep |
in,assess |
R1136 |
T4830 |
T4829 |
pobj |
mice,in |
R1137 |
T4831 |
T4822 |
punct |
", ",crossed |
R1138 |
T4832 |
T4833 |
det |
both,lines |
R1139 |
T4833 |
T4822 |
nsubjpass |
lines,crossed |
R1140 |
T4834 |
T4833 |
prep |
of,lines |
R1141 |
T4835 |
T4836 |
nmod |
ApcCKO,mice |
R1142 |
T4836 |
T4834 |
pobj |
mice,of |
R1143 |
T4837 |
T4835 |
punct |
/,ApcCKO |
R1144 |
T4838 |
T4835 |
punct |
+,ApcCKO |
R1145 |
T4839 |
T4822 |
auxpass |
were,crossed |
R1146 |
T4840 |
T4822 |
prep |
with,crossed |
R1147 |
T4841 |
T4842 |
det |
the,deleter |
R1148 |
T4842 |
T4840 |
pobj |
deleter,with |
R1149 |
T4843 |
T4842 |
compound |
Cre,deleter |
R1150 |
T4844 |
T4842 |
punct |
-,deleter |
R1151 |
T4845 |
T4846 |
aux |
to,generate |
R1152 |
T4846 |
T4822 |
advcl |
generate,crossed |
R1153 |
T4847 |
T4848 |
det |
the,line |
R1154 |
T4848 |
T4846 |
dobj |
line,generate |
R1155 |
T4849 |
T4850 |
compound |
germline,knockout |
R1156 |
T4850 |
T4848 |
compound |
knockout,line |
R1157 |
T4851 |
T4848 |
prep |
of,line |
R1158 |
T4852 |
T4851 |
pobj |
Apc,of |
R1159 |
T4853 |
T4848 |
punct |
", ",line |
R1160 |
T4854 |
T4848 |
acl |
designated,line |
R1161 |
T4855 |
T4854 |
oprd |
ApcΔ580,designated |
R1162 |
T4856 |
T4855 |
punct |
/,ApcΔ580 |
R1163 |
T4857 |
T4855 |
punct |
+,ApcΔ580 |
R1164 |
T4858 |
T4822 |
punct |
.,crossed |
R1165 |
T4860 |
T4861 |
det |
The,allele |
R1166 |
T4861 |
T4863 |
nsubj |
allele,lacks |
R1167 |
T4862 |
T4861 |
amod |
mutant,allele |
R1168 |
T4864 |
T4861 |
punct |
(,allele |
R1169 |
T4865 |
T4861 |
appos |
ApcΔ580,allele |
R1170 |
T4866 |
T4863 |
punct |
),lacks |
R1171 |
T4867 |
T4863 |
dobj |
exon,lacks |
R1172 |
T4868 |
T4867 |
nummod |
14,exon |
R1173 |
T4869 |
T4870 |
punct |
(,1A |
R1174 |
T4870 |
T4863 |
parataxis |
1A,lacks |
R1175 |
T4871 |
T4870 |
compound |
Figure,1A |
R1176 |
T4872 |
T4870 |
punct |
),1A |
R1177 |
T4873 |
T4863 |
punct |
.,lacks |
R1178 |
T4875 |
T4876 |
det |
The,transcript |
R1179 |
T4876 |
T4877 |
nsubj |
transcript,results |
R1180 |
T4878 |
T4876 |
prep |
from,transcript |
R1181 |
T4879 |
T4878 |
pobj |
loss,from |
R1182 |
T4880 |
T4879 |
prep |
of,loss |
R1183 |
T4881 |
T4880 |
pobj |
exon,of |
R1184 |
T4882 |
T4881 |
nummod |
14,exon |
R1185 |
T4883 |
T4877 |
prep |
in,results |
R1186 |
T4884 |
T4885 |
det |
a,shift |
R1187 |
T4885 |
T4883 |
pobj |
shift,in |
R1188 |
T4886 |
T4885 |
prep |
in,shift |
R1189 |
T4887 |
T4888 |
det |
the,frame |
R1190 |
T4888 |
T4886 |
pobj |
frame,in |
R1191 |
T4889 |
T4888 |
amod |
normal,frame |
R1192 |
T4890 |
T4888 |
compound |
reading,frame |
R1193 |
T4891 |
T4877 |
punct |
", ",results |
R1194 |
T4892 |
T4877 |
advcl |
resulting,results |
R1195 |
T4893 |
T4892 |
prep |
in,resulting |
R1196 |
T4894 |
T4895 |
det |
a,codon |
R1197 |
T4895 |
T4893 |
pobj |
codon,in |
R1198 |
T4896 |
T4895 |
amod |
premature,codon |
R1199 |
T4897 |
T4898 |
compound |
chain,termination |
R1200 |
T4898 |
T4895 |
compound |
termination,codon |
R1201 |
T4899 |
T4900 |
dep |
which,result |
R1202 |
T4900 |
T4895 |
relcl |
result,codon |
R1203 |
T4901 |
T4900 |
punct |
", ",result |
R1204 |
T4902 |
T4903 |
mark |
if,utilized |
R1205 |
T4903 |
T4900 |
advcl |
utilized,result |
R1206 |
T4904 |
T4900 |
punct |
", ",result |
R1207 |
T4905 |
T4900 |
aux |
would,result |
R1208 |
T4906 |
T4900 |
prep |
in,result |
R1209 |
T4907 |
T4908 |
det |
a,polypeptide |
R1210 |
T4908 |
T4906 |
pobj |
polypeptide,in |
R1211 |
T4909 |
T4908 |
amod |
truncated,polypeptide |
R1212 |
T4910 |
T4911 |
dep |
that,is |
R1213 |
T4911 |
T4908 |
relcl |
is,polypeptide |
R1214 |
T4912 |
T4913 |
nummod |
605,aa |
R1215 |
T4913 |
T4911 |
attr |
aa,is |
R1216 |
T4914 |
T4913 |
prep |
in,aa |
R1217 |
T4915 |
T4914 |
pobj |
length,in |
R1218 |
T4916 |
T4913 |
punct |
", ",aa |
R1219 |
T4917 |
T4918 |
prep |
of,correspond |
R1220 |
T4918 |
T4913 |
relcl |
correspond,aa |
R1221 |
T4919 |
T4917 |
pobj |
which,of |
R1222 |
T4920 |
T4921 |
det |
the,aa |
R1223 |
T4921 |
T4918 |
nsubj |
aa,correspond |
R1224 |
T4922 |
T4921 |
amod |
first,aa |
R1225 |
T4923 |
T4921 |
nummod |
580,aa |
R1226 |
T4924 |
T4918 |
prep |
to,correspond |
R1227 |
T4925 |
T4926 |
det |
the,protein |
R1228 |
T4926 |
T4924 |
pobj |
protein,to |
R1229 |
T4927 |
T4926 |
amod |
normal,protein |
R1230 |
T4928 |
T4926 |
compound |
Apc,protein |
R1231 |
T4929 |
T4877 |
punct |
.,results |
R924 |
T4605 |
T4606 |
aux |
To,investigate |
R925 |
T4606 |
T4607 |
advcl |
investigate,used |
R926 |
T4608 |
T4609 |
det |
the,role |
R927 |
T4609 |
T4606 |
dobj |
role,investigate |
R928 |
T4610 |
T4609 |
prep |
of,role |
R929 |
T4611 |
T4610 |
pobj |
Apc,of |
R930 |
T4612 |
T4609 |
prep |
in,role |
R931 |
T4613 |
T4612 |
pobj |
development,in |
R932 |
T4614 |
T4613 |
prep |
of,development |
R933 |
T4615 |
T4614 |
pobj |
skin,of |
R934 |
T4616 |
T4615 |
cc |
and,skin |
R935 |
T4617 |
T4618 |
poss |
its,appendages |
R936 |
T4618 |
T4615 |
conj |
appendages,skin |
R937 |
T4619 |
T4607 |
punct |
", ",used |
R938 |
T4620 |
T4607 |
nsubj |
we,used |
R939 |
T4621 |
T4622 |
det |
the,technology |
R940 |
T4622 |
T4607 |
dobj |
technology,used |
R941 |
T4623 |
T4624 |
compound |
Cre,loxP |
R942 |
T4624 |
T4622 |
compound |
loxP,technology |
R943 |
T4625 |
T4624 |
punct |
/,loxP |
R944 |
T4626 |
T4627 |
aux |
to,introduce |
R945 |
T4627 |
T4607 |
advcl |
introduce,used |
R946 |
T4628 |
T4629 |
det |
a,mutation |
R947 |
T4629 |
T4627 |
dobj |
mutation,introduce |
R948 |
T4630 |
T4629 |
amod |
conditional,mutation |
R949 |
T4631 |
T4629 |
prep |
of,mutation |
R950 |
T4632 |
T4633 |
det |
the,gene |
R951 |
T4633 |
T4631 |
pobj |
gene,of |
R952 |
T4634 |
T4633 |
compound |
Apc,gene |
R953 |
T4635 |
T4627 |
prep |
in,introduce |
R954 |
T4636 |
T4635 |
pobj |
mice,in |
R955 |
T4637 |
T4607 |
punct |
.,used |
R956 |
T4639 |
T4640 |
nsubj |
We,constructed |
R957 |
T4641 |
T4642 |
amod |
embryonic,stem |
R958 |
T4642 |
T4643 |
nmod |
stem,cells |
R959 |
T4643 |
T4640 |
dobj |
cells,constructed |
R960 |
T4644 |
T4642 |
punct |
(,stem |
R961 |
T4645 |
T4642 |
appos |
ES,stem |
R962 |
T4646 |
T4643 |
punct |
),cells |
R963 |
T4647 |
T4643 |
cc |
and,cells |
R964 |
T4648 |
T4643 |
conj |
mice,cells |
R965 |
T4649 |
T4648 |
acl |
carrying,mice |
R966 |
T4650 |
T4651 |
det |
an,allele |
R967 |
T4651 |
T4649 |
dobj |
allele,carrying |
R968 |
T4652 |
T4651 |
compound |
Apc,allele |
R969 |
T4653 |
T4651 |
acl |
harboring,allele |
R970 |
T4654 |
T4655 |
preconj |
both,pair |
R971 |
T4655 |
T4653 |
dobj |
pair,harboring |
R972 |
T4656 |
T4655 |
det |
a,pair |
R973 |
T4657 |
T4655 |
prep |
of,pair |
R974 |
T4658 |
T4659 |
compound |
loxP,sites |
R975 |
T4659 |
T4657 |
pobj |
sites,of |
R976 |
T4660 |
T4655 |
acl |
flanking,pair |
R977 |
T4661 |
T4662 |
compound |
Apc,exon |
R978 |
T4662 |
T4660 |
dobj |
exon,flanking |
R979 |
T4663 |
T4662 |
nummod |
14,exon |
R980 |
T4664 |
T4655 |
cc |
and,pair |
R981 |
T4665 |
T4666 |
det |
a,pair |
R982 |
T4666 |
T4655 |
conj |
pair,pair |
R983 |
T4667 |
T4666 |
prep |
of,pair |
R984 |
T4668 |
T4669 |
nmod |
FLP,target |
R985 |
T4669 |
T4671 |
nmod |
target,sites |
R986 |
T4670 |
T4669 |
nmod |
recognition,target |
R987 |
T4671 |
T4667 |
pobj |
sites,of |
R988 |
T4672 |
T4669 |
punct |
(,target |
R989 |
T4673 |
T4669 |
appos |
FRT,target |
R990 |
T4674 |
T4671 |
punct |
),sites |
R991 |
T4675 |
T4666 |
acl |
flanking,pair |
R992 |
T4676 |
T4677 |
compound |
PGK,neomycin |
R993 |
T4677 |
T4679 |
compound |
neomycin,cassette |
R994 |
T4678 |
T4677 |
punct |
-,neomycin |
R995 |
T4679 |
T4675 |
dobj |
cassette,flanking |
R996 |
T4680 |
T4679 |
compound |
selection,cassette |
R997 |
T4681 |
T4640 |
prep |
by,constructed |
R998 |
T4682 |
T4681 |
pobj |
recombineering,by |
R999 |
T4683 |
T4684 |
punct |
[,13 |