Id |
Subject |
Object |
Predicate |
Lexical cue |
T437 |
0-9 |
VBG |
denotes |
Following |
T439 |
10-13 |
DT |
denotes |
the |
T441 |
14-22 |
NN |
denotes |
landmark |
T440 |
23-32 |
NN |
denotes |
discovery |
T442 |
33-35 |
IN |
denotes |
by |
T443 |
36-42 |
NNP |
denotes |
Scully |
T444 |
43-45 |
FW |
denotes |
et |
T445 |
46-48 |
FW |
denotes |
al |
T446 |
49-53 |
IN |
denotes |
that |
T448 |
54-57 |
DT |
denotes |
the |
T450 |
58-68 |
JJ |
denotes |
homologous |
T451 |
69-80 |
NN |
denotes |
recombinase |
T449 |
81-86 |
NN |
denotes |
RAD51 |
T447 |
87-98 |
VBZ |
denotes |
colocalizes |
T452 |
99-101 |
IN |
denotes |
at |
T453 |
102-112 |
JJ |
denotes |
subnuclear |
T454 |
113-118 |
NNS |
denotes |
sites |
T455 |
119-123 |
IN |
denotes |
with |
T456 |
124-129 |
NN |
denotes |
BRCA1 |
T457 |
130-131 |
-LRB- |
denotes |
[ |
T458 |
131-132 |
CD |
denotes |
9 |
T459 |
132-133 |
-RRB- |
denotes |
] |
T460 |
133-135 |
, |
denotes |
, |
T461 |
135-136 |
DT |
denotes |
a |
T462 |
137-143 |
NN |
denotes |
number |
T463 |
144-146 |
IN |
denotes |
of |
T464 |
147-157 |
JJ |
denotes |
additional |
T465 |
158-165 |
NNS |
denotes |
results |
T466 |
166-170 |
VBP |
denotes |
have |
T438 |
171-179 |
VBN |
denotes |
provided |
T467 |
180-188 |
NN |
denotes |
evidence |
T468 |
189-193 |
IN |
denotes |
that |
T470 |
194-198 |
CC |
denotes |
both |
T471 |
199-204 |
NN |
denotes |
BRCA1 |
T472 |
205-208 |
CC |
denotes |
and |
T473 |
209-214 |
NN |
denotes |
BRCA2 |
T474 |
215-218 |
VBP |
denotes |
are |
T469 |
219-227 |
VBN |
denotes |
involved |
T475 |
228-230 |
IN |
denotes |
in |
T476 |
231-246 |
JJ |
denotes |
recombinational |
T477 |
247-253 |
NN |
denotes |
repair |
T478 |
254-256 |
IN |
denotes |
of |
T479 |
257-260 |
NN |
denotes |
DNA |
T480 |
261-267 |
NN |
denotes |
damage |
T481 |
267-268 |
. |
denotes |
. |
T482 |
268-383 |
sentence |
denotes |
BRCA1 and BRCA2 form discrete nuclear foci during the S phase and after exposure to DNA damaging agents [9,10,11]. |
T483 |
269-274 |
NN |
denotes |
BRCA1 |
T485 |
275-278 |
CC |
denotes |
and |
T486 |
279-284 |
NN |
denotes |
BRCA2 |
T484 |
285-289 |
VBP |
denotes |
form |
T487 |
290-298 |
JJ |
denotes |
discrete |
T489 |
299-306 |
JJ |
denotes |
nuclear |
T488 |
307-311 |
NNS |
denotes |
foci |
T490 |
312-318 |
IN |
denotes |
during |
T491 |
319-322 |
DT |
denotes |
the |
T493 |
323-324 |
NN |
denotes |
S |
T492 |
325-330 |
NN |
denotes |
phase |
T494 |
331-334 |
CC |
denotes |
and |
T495 |
335-340 |
IN |
denotes |
after |
T496 |
341-349 |
NN |
denotes |
exposure |
T497 |
350-352 |
IN |
denotes |
to |
T498 |
353-356 |
NN |
denotes |
DNA |
T499 |
357-365 |
VBG |
denotes |
damaging |
T500 |
366-372 |
NNS |
denotes |
agents |
T501 |
373-374 |
-LRB- |
denotes |
[ |
T503 |
374-375 |
CD |
denotes |
9 |
T504 |
375-376 |
, |
denotes |
, |
T505 |
376-378 |
CD |
denotes |
10 |
T506 |
378-379 |
, |
denotes |
, |
T502 |
379-381 |
CD |
denotes |
11 |
T507 |
381-382 |
-RRB- |
denotes |
] |
T508 |
382-383 |
. |
denotes |
. |
T509 |
383-473 |
sentence |
denotes |
These foci are probably sites of repair of spontaneous and induced DNA damage [12,13,14]. |
T510 |
384-389 |
DT |
denotes |
These |
T511 |
390-394 |
NNS |
denotes |
foci |
T512 |
395-398 |
VBP |
denotes |
are |
T513 |
399-407 |
RB |
denotes |
probably |
T514 |
408-413 |
NNS |
denotes |
sites |
T515 |
414-416 |
IN |
denotes |
of |
T516 |
417-423 |
NN |
denotes |
repair |
T517 |
424-426 |
IN |
denotes |
of |
T518 |
427-438 |
JJ |
denotes |
spontaneous |
T520 |
439-442 |
CC |
denotes |
and |
T521 |
443-450 |
JJ |
denotes |
induced |
T522 |
451-454 |
NN |
denotes |
DNA |
T519 |
455-461 |
NN |
denotes |
damage |
T523 |
462-463 |
-LRB- |
denotes |
[ |
T525 |
463-465 |
CD |
denotes |
12 |
T526 |
465-466 |
, |
denotes |
, |
T527 |
466-468 |
CD |
denotes |
13 |
T528 |
468-469 |
, |
denotes |
, |
T524 |
469-471 |
CD |
denotes |
14 |
T529 |
471-472 |
-RRB- |
denotes |
] |
T530 |
472-473 |
. |
denotes |
. |
T531 |
473-671 |
sentence |
denotes |
Cell lines defective in either BRCA1 or BRCA2 are sensitive to damaging agents that form double-strand breaks (DSBs), as are other cell lines defective in recombinational repair (reviewed in [15]). |
T532 |
474-478 |
NN |
denotes |
Cell |
T533 |
479-484 |
NNS |
denotes |
lines |
T535 |
485-494 |
JJ |
denotes |
defective |
T536 |
495-497 |
IN |
denotes |
in |
T537 |
498-504 |
CC |
denotes |
either |
T538 |
505-510 |
NN |
denotes |
BRCA1 |
T539 |
511-513 |
CC |
denotes |
or |
T540 |
514-519 |
NN |
denotes |
BRCA2 |
T534 |
520-523 |
VBP |
denotes |
are |
T541 |
524-533 |
JJ |
denotes |
sensitive |
T542 |
534-536 |
IN |
denotes |
to |
T543 |
537-545 |
VBG |
denotes |
damaging |
T544 |
546-552 |
NNS |
denotes |
agents |
T545 |
553-557 |
WDT |
denotes |
that |
T546 |
558-562 |
VBP |
denotes |
form |
T547 |
563-569 |
JJ |
denotes |
double |
T549 |
569-570 |
HYPH |
denotes |
- |
T548 |
570-576 |
JJ |
denotes |
strand |
T550 |
577-583 |
NNS |
denotes |
breaks |
T551 |
584-585 |
-LRB- |
denotes |
( |
T552 |
585-589 |
NNS |
denotes |
DSBs |
T553 |
589-590 |
-RRB- |
denotes |
) |
T554 |
590-592 |
, |
denotes |
, |
T555 |
592-594 |
IN |
denotes |
as |
T556 |
595-598 |
VBP |
denotes |
are |
T557 |
599-604 |
JJ |
denotes |
other |
T559 |
605-609 |
NN |
denotes |
cell |
T558 |
610-615 |
NNS |
denotes |
lines |
T560 |
616-625 |
JJ |
denotes |
defective |
T561 |
626-628 |
IN |
denotes |
in |
T562 |
629-644 |
JJ |
denotes |
recombinational |
T563 |
645-651 |
NN |
denotes |
repair |
T564 |
652-653 |
-LRB- |
denotes |
( |
T565 |
653-661 |
VBN |
denotes |
reviewed |
T566 |
662-664 |
IN |
denotes |
in |
T567 |
665-666 |
-LRB- |
denotes |
[ |
T568 |
666-668 |
CD |
denotes |
15 |
T569 |
668-669 |
-RRB- |
denotes |
] |
T570 |
669-670 |
-RRB- |
denotes |
) |
T571 |
670-671 |
. |
denotes |
. |
T572 |
671-765 |
sentence |
denotes |
BRCA2 interacts with the RAD51 recombinase via direct protein-protein contacts [16,17,18,19]. |
T573 |
672-677 |
NN |
denotes |
BRCA2 |
T574 |
678-687 |
VBZ |
denotes |
interacts |
T575 |
688-692 |
IN |
denotes |
with |
T576 |
693-696 |
DT |
denotes |
the |
T578 |
697-702 |
NN |
denotes |
RAD51 |
T577 |
703-714 |
NN |
denotes |
recombinase |
T579 |
715-718 |
IN |
denotes |
via |
T580 |
719-725 |
JJ |
denotes |
direct |
T582 |
726-733 |
NN |
denotes |
protein |
T584 |
733-734 |
HYPH |
denotes |
- |
T583 |
734-741 |
NN |
denotes |
protein |
T581 |
742-750 |
NNS |
denotes |
contacts |
T585 |
751-752 |
-LRB- |
denotes |
[ |
T587 |
752-754 |
CD |
denotes |
16 |
T588 |
754-755 |
, |
denotes |
, |
T589 |
755-757 |
CD |
denotes |
17 |
T590 |
757-758 |
, |
denotes |
, |
T591 |
758-760 |
CD |
denotes |
18 |
T592 |
760-761 |
, |
denotes |
, |
T586 |
761-763 |
CD |
denotes |
19 |
T593 |
763-764 |
-RRB- |
denotes |
] |
T594 |
764-765 |
. |
denotes |
. |
T595 |
765-900 |
sentence |
denotes |
Biochemical analysis also showed interaction between BRCA1 and RAD51, although these detected interactions may have been indirect [9]. |
T596 |
766-777 |
JJ |
denotes |
Biochemical |
T597 |
778-786 |
NN |
denotes |
analysis |
T599 |
787-791 |
RB |
denotes |
also |
T598 |
792-798 |
VBD |
denotes |
showed |
T600 |
799-810 |
NN |
denotes |
interaction |
T601 |
811-818 |
IN |
denotes |
between |
T602 |
819-824 |
NN |
denotes |
BRCA1 |
T603 |
825-828 |
CC |
denotes |
and |
T604 |
829-834 |
NN |
denotes |
RAD51 |
T605 |
834-836 |
, |
denotes |
, |
T606 |
836-844 |
IN |
denotes |
although |
T608 |
845-850 |
DT |
denotes |
these |
T610 |
851-859 |
VBN |
denotes |
detected |
T609 |
860-872 |
NNS |
denotes |
interactions |
T611 |
873-876 |
MD |
denotes |
may |
T612 |
877-881 |
VB |
denotes |
have |
T607 |
882-886 |
VBN |
denotes |
been |
T613 |
887-895 |
JJ |
denotes |
indirect |
T614 |
896-897 |
-LRB- |
denotes |
[ |
T615 |
897-898 |
CD |
denotes |
9 |
T616 |
898-899 |
-RRB- |
denotes |
] |
T617 |
899-900 |
. |
denotes |
. |
T618 |
900-971 |
sentence |
denotes |
The BRC repeats of BRCA2 are responsible for direct RAD51 interaction. |
T619 |
901-904 |
DT |
denotes |
The |
T621 |
905-908 |
NN |
denotes |
BRC |
T620 |
909-916 |
NNS |
denotes |
repeats |
T623 |
917-919 |
IN |
denotes |
of |
T624 |
920-925 |
NN |
denotes |
BRCA2 |
T622 |
926-929 |
VBP |
denotes |
are |
T625 |
930-941 |
JJ |
denotes |
responsible |
T626 |
942-945 |
IN |
denotes |
for |
T627 |
946-952 |
JJ |
denotes |
direct |
T629 |
953-958 |
NN |
denotes |
RAD51 |
T628 |
959-970 |
NN |
denotes |
interaction |
T630 |
970-971 |
. |
denotes |
. |
T631 |
971-1190 |
sentence |
denotes |
Cells lacking BRCA1/2 fail to form damage-induced subnuclear RAD51 foci with normal efficiency, suggesting that these proteins are required for the formation of recombinase complexes at the sites of DNA damage [20,21]. |
T632 |
972-977 |
NNS |
denotes |
Cells |
T634 |
978-985 |
VBG |
denotes |
lacking |
T635 |
986-991 |
NN |
denotes |
BRCA1 |
T637 |
991-992 |
HYPH |
denotes |
/ |
T636 |
992-993 |
NN |
denotes |
2 |
T633 |
994-998 |
VBP |
denotes |
fail |
T638 |
999-1001 |
TO |
denotes |
to |
T639 |
1002-1006 |
VB |
denotes |
form |
T640 |
1007-1013 |
NN |
denotes |
damage |
T642 |
1013-1014 |
HYPH |
denotes |
- |
T641 |
1014-1021 |
VBN |
denotes |
induced |
T644 |
1022-1032 |
JJ |
denotes |
subnuclear |
T643 |
1033-1038 |
NN |
denotes |
RAD51 |
T645 |
1039-1043 |
NNS |
denotes |
foci |
T646 |
1044-1048 |
IN |
denotes |
with |
T647 |
1049-1055 |
JJ |
denotes |
normal |
T648 |
1056-1066 |
NN |
denotes |
efficiency |
T649 |
1066-1068 |
, |
denotes |
, |
T650 |
1068-1078 |
VBG |
denotes |
suggesting |
T651 |
1079-1083 |
IN |
denotes |
that |
T653 |
1084-1089 |
DT |
denotes |
these |
T654 |
1090-1098 |
NN |
denotes |
proteins |
T655 |
1099-1102 |
VBP |
denotes |
are |
T652 |
1103-1111 |
VBN |
denotes |
required |
T656 |
1112-1115 |
IN |
denotes |
for |
T657 |
1116-1119 |
DT |
denotes |
the |
T658 |
1120-1129 |
NN |
denotes |
formation |
T659 |
1130-1132 |
IN |
denotes |
of |
T660 |
1133-1144 |
NN |
denotes |
recombinase |
T661 |
1145-1154 |
NNS |
denotes |
complexes |
T662 |
1155-1157 |
IN |
denotes |
at |
T663 |
1158-1161 |
DT |
denotes |
the |
T664 |
1162-1167 |
NNS |
denotes |
sites |
T665 |
1168-1170 |
IN |
denotes |
of |
T666 |
1171-1174 |
NN |
denotes |
DNA |
T667 |
1175-1181 |
NN |
denotes |
damage |
T668 |
1182-1183 |
-LRB- |
denotes |
[ |
T670 |
1183-1185 |
CD |
denotes |
20 |
T671 |
1185-1186 |
, |
denotes |
, |
T669 |
1186-1188 |
CD |
denotes |
21 |
T672 |
1188-1189 |
-RRB- |
denotes |
] |
T673 |
1189-1190 |
. |
denotes |
. |
T674 |
1190-1351 |
sentence |
denotes |
Finally, genetic measurements of recombination frequency have shown that Brca1-/- embryonic stem (ES) cells are deficient in recombinational DSB repair [22,23]. |
T675 |
1191-1198 |
RB |
denotes |
Finally |
T677 |
1198-1200 |
, |
denotes |
, |
T678 |
1200-1207 |
JJ |
denotes |
genetic |
T679 |
1208-1220 |
NNS |
denotes |
measurements |
T680 |
1221-1223 |
IN |
denotes |
of |
T681 |
1224-1237 |
NN |
denotes |
recombination |
T682 |
1238-1247 |
NN |
denotes |
frequency |
T683 |
1248-1252 |
VBP |
denotes |
have |
T676 |
1253-1258 |
VBN |
denotes |
shown |
T684 |
1259-1263 |
IN |
denotes |
that |
T686 |
1264-1269 |
NN |
denotes |
Brca1 |
T688 |
1269-1270 |
SYM |
denotes |
- |
T689 |
1270-1271 |
HYPH |
denotes |
/ |
T690 |
1271-1272 |
SYM |
denotes |
- |
T691 |
1273-1282 |
JJ |
denotes |
embryonic |
T692 |
1283-1287 |
NN |
denotes |
stem |
T693 |
1288-1289 |
-LRB- |
denotes |
( |
T694 |
1289-1291 |
NN |
denotes |
ES |
T695 |
1291-1292 |
-RRB- |
denotes |
) |
T687 |
1293-1298 |
NNS |
denotes |
cells |
T685 |
1299-1302 |
VBP |
denotes |
are |
T696 |
1303-1312 |
JJ |
denotes |
deficient |
T697 |
1313-1315 |
IN |
denotes |
in |
T698 |
1316-1331 |
JJ |
denotes |
recombinational |
T700 |
1332-1335 |
NN |
denotes |
DSB |
T699 |
1336-1342 |
NN |
denotes |
repair |
T701 |
1343-1344 |
-LRB- |
denotes |
[ |
T703 |
1344-1346 |
CD |
denotes |
22 |
T704 |
1346-1347 |
, |
denotes |
, |
T702 |
1347-1349 |
CD |
denotes |
23 |
T705 |
1349-1350 |
-RRB- |
denotes |
] |
T706 |
1350-1351 |
. |
denotes |
. |
T707 |
1351-1646 |
sentence |
denotes |
The similarity between phenotypes associated with BRCA1 and BRCA2 deficiency, together with data showing a similar effect of DNA damage on distribution of BRCA1 and BRCA2 in repair-proficient cells, led to the hypothesis that BRCA2, like BRCA1, is required for efficient recombinational repair. |
T708 |
1352-1355 |
DT |
denotes |
The |
T709 |
1356-1366 |
NN |
denotes |
similarity |
T711 |
1367-1374 |
IN |
denotes |
between |
T712 |
1375-1385 |
NNS |
denotes |
phenotypes |
T713 |
1386-1396 |
VBN |
denotes |
associated |
T714 |
1397-1401 |
IN |
denotes |
with |
T715 |
1402-1407 |
NN |
denotes |
BRCA1 |
T717 |
1408-1411 |
CC |
denotes |
and |
T718 |
1412-1417 |
NN |
denotes |
BRCA2 |
T716 |
1418-1428 |
NN |
denotes |
deficiency |
T719 |
1428-1430 |
, |
denotes |
, |
T720 |
1430-1438 |
RB |
denotes |
together |
T721 |
1439-1443 |
IN |
denotes |
with |
T722 |
1444-1448 |
NNS |
denotes |
data |
T723 |
1449-1456 |
VBG |
denotes |
showing |
T724 |
1457-1458 |
DT |
denotes |
a |
T726 |
1459-1466 |
JJ |
denotes |
similar |
T725 |
1467-1473 |
NN |
denotes |
effect |
T727 |
1474-1476 |
IN |
denotes |
of |
T728 |
1477-1480 |
NN |
denotes |
DNA |
T729 |
1481-1487 |
NN |
denotes |
damage |
T730 |
1488-1490 |
IN |
denotes |
on |
T731 |
1491-1503 |
NN |
denotes |
distribution |
T732 |
1504-1506 |
IN |
denotes |
of |
T733 |
1507-1512 |
NN |
denotes |
BRCA1 |
T734 |
1513-1516 |
CC |
denotes |
and |
T735 |
1517-1522 |
NN |
denotes |
BRCA2 |
T736 |
1523-1525 |
IN |
denotes |
in |
T737 |
1526-1532 |
NN |
denotes |
repair |
T739 |
1532-1533 |
HYPH |
denotes |
- |
T738 |
1533-1543 |
JJ |
denotes |
proficient |
T740 |
1544-1549 |
NNS |
denotes |
cells |
T741 |
1549-1551 |
, |
denotes |
, |
T710 |
1551-1554 |
VBD |
denotes |
led |
T742 |
1555-1557 |
IN |
denotes |
to |
T743 |
1558-1561 |
DT |
denotes |
the |
T744 |
1562-1572 |
NN |
denotes |
hypothesis |
T745 |
1573-1577 |
IN |
denotes |
that |
T747 |
1578-1583 |
NN |
denotes |
BRCA2 |
T748 |
1583-1585 |
, |
denotes |
, |
T749 |
1585-1589 |
IN |
denotes |
like |
T750 |
1590-1595 |
NN |
denotes |
BRCA1 |
T751 |
1595-1597 |
, |
denotes |
, |
T752 |
1597-1599 |
VBZ |
denotes |
is |
T746 |
1600-1608 |
VBN |
denotes |
required |
T753 |
1609-1612 |
IN |
denotes |
for |
T754 |
1613-1622 |
JJ |
denotes |
efficient |
T756 |
1623-1638 |
JJ |
denotes |
recombinational |
T755 |
1639-1645 |
NN |
denotes |
repair |
T757 |
1645-1646 |
. |
denotes |
. |
T758 |
1646-1727 |
sentence |
denotes |
The paper by Moynahan et al [24] provides important support for this hypothesis. |
T759 |
1647-1650 |
DT |
denotes |
The |
T760 |
1651-1656 |
NN |
denotes |
paper |
T762 |
1657-1659 |
IN |
denotes |
by |
T763 |
1660-1668 |
NNP |
denotes |
Moynahan |
T764 |
1669-1671 |
FW |
denotes |
et |
T765 |
1672-1674 |
FW |
denotes |
al |
T766 |
1675-1676 |
-LRB- |
denotes |
[ |
T767 |
1676-1678 |
CD |
denotes |
24 |
T768 |
1678-1679 |
-RRB- |
denotes |
] |
T761 |
1680-1688 |
VBZ |
denotes |
provides |
T769 |
1689-1698 |
JJ |
denotes |
important |
T770 |
1699-1706 |
NN |
denotes |
support |
T771 |
1707-1710 |
IN |
denotes |
for |
T772 |
1711-1715 |
DT |
denotes |
this |
T773 |
1716-1726 |
NN |
denotes |
hypothesis |
T774 |
1726-1727 |
. |
denotes |
. |
R241 |
T437 |
T438 |
prep |
Following,provided |
R242 |
T439 |
T440 |
det |
the,discovery |
R243 |
T440 |
T437 |
pobj |
discovery,Following |
R244 |
T441 |
T440 |
compound |
landmark,discovery |
R245 |
T442 |
T440 |
prep |
by,discovery |
R246 |
T443 |
T442 |
pobj |
Scully,by |
R247 |
T444 |
T445 |
advmod |
et,al |
R248 |
T445 |
T443 |
advmod |
al,Scully |
R249 |
T446 |
T447 |
mark |
that,colocalizes |
R250 |
T447 |
T440 |
acl |
colocalizes,discovery |
R251 |
T448 |
T449 |
det |
the,RAD51 |
R252 |
T449 |
T447 |
nsubj |
RAD51,colocalizes |
R253 |
T450 |
T449 |
amod |
homologous,RAD51 |
R254 |
T451 |
T449 |
compound |
recombinase,RAD51 |
R255 |
T452 |
T447 |
prep |
at,colocalizes |
R256 |
T453 |
T454 |
amod |
subnuclear,sites |
R257 |
T454 |
T452 |
pobj |
sites,at |
R258 |
T455 |
T447 |
prep |
with,colocalizes |
R259 |
T456 |
T455 |
pobj |
BRCA1,with |
R260 |
T457 |
T458 |
punct |
[,9 |
R261 |
T458 |
T447 |
parataxis |
9,colocalizes |
R262 |
T459 |
T458 |
punct |
],9 |
R263 |
T460 |
T438 |
punct |
", ",provided |
R264 |
T461 |
T462 |
det |
a,number |
R265 |
T462 |
T438 |
nsubj |
number,provided |
R266 |
T463 |
T462 |
prep |
of,number |
R267 |
T464 |
T465 |
amod |
additional,results |
R268 |
T465 |
T463 |
pobj |
results,of |
R269 |
T466 |
T438 |
aux |
have,provided |
R270 |
T467 |
T438 |
dobj |
evidence,provided |
R271 |
T468 |
T469 |
mark |
that,involved |
R272 |
T469 |
T467 |
acl |
involved,evidence |
R273 |
T470 |
T471 |
preconj |
both,BRCA1 |
R274 |
T471 |
T469 |
nsubjpass |
BRCA1,involved |
R275 |
T472 |
T471 |
cc |
and,BRCA1 |
R276 |
T473 |
T471 |
conj |
BRCA2,BRCA1 |
R277 |
T474 |
T469 |
auxpass |
are,involved |
R278 |
T475 |
T469 |
prep |
in,involved |
R279 |
T476 |
T477 |
amod |
recombinational,repair |
R280 |
T477 |
T475 |
pobj |
repair,in |
R281 |
T478 |
T477 |
prep |
of,repair |
R282 |
T479 |
T480 |
compound |
DNA,damage |
R283 |
T480 |
T478 |
pobj |
damage,of |
R284 |
T481 |
T438 |
punct |
.,provided |
R285 |
T483 |
T484 |
nsubj |
BRCA1,form |
R286 |
T485 |
T483 |
cc |
and,BRCA1 |
R287 |
T486 |
T483 |
conj |
BRCA2,BRCA1 |
R288 |
T487 |
T488 |
amod |
discrete,foci |
R289 |
T488 |
T484 |
dobj |
foci,form |
R290 |
T489 |
T488 |
amod |
nuclear,foci |
R291 |
T490 |
T484 |
prep |
during,form |
R292 |
T491 |
T492 |
det |
the,phase |
R293 |
T492 |
T490 |
pobj |
phase,during |
R294 |
T493 |
T492 |
compound |
S,phase |
R295 |
T494 |
T490 |
cc |
and,during |
R296 |
T495 |
T490 |
conj |
after,during |
R297 |
T496 |
T495 |
pobj |
exposure,after |
R298 |
T497 |
T496 |
prep |
to,exposure |
R299 |
T498 |
T499 |
npadvmod |
DNA,damaging |
R300 |
T499 |
T500 |
amod |
damaging,agents |
R301 |
T500 |
T497 |
pobj |
agents,to |
R302 |
T501 |
T502 |
punct |
[,11 |
R303 |
T502 |
T484 |
parataxis |
11,form |
R304 |
T503 |
T502 |
nummod |
9,11 |
R305 |
T504 |
T502 |
punct |
",",11 |
R306 |
T505 |
T502 |
nummod |
10,11 |
R307 |
T506 |
T502 |
punct |
",",11 |
R308 |
T507 |
T502 |
punct |
],11 |
R309 |
T508 |
T484 |
punct |
.,form |
R310 |
T510 |
T511 |
det |
These,foci |
R311 |
T511 |
T512 |
nsubj |
foci,are |
R312 |
T513 |
T512 |
advmod |
probably,are |
R313 |
T514 |
T512 |
attr |
sites,are |
R314 |
T515 |
T514 |
prep |
of,sites |
R315 |
T516 |
T515 |
pobj |
repair,of |
R316 |
T517 |
T516 |
prep |
of,repair |
R317 |
T518 |
T519 |
amod |
spontaneous,damage |
R318 |
T519 |
T517 |
pobj |
damage,of |
R319 |
T520 |
T518 |
cc |
and,spontaneous |
R320 |
T521 |
T518 |
conj |
induced,spontaneous |
R321 |
T522 |
T519 |
compound |
DNA,damage |
R322 |
T523 |
T524 |
punct |
[,14 |
R323 |
T524 |
T512 |
parataxis |
14,are |
R324 |
T525 |
T524 |
nummod |
12,14 |
R325 |
T526 |
T524 |
punct |
",",14 |
R326 |
T527 |
T524 |
nummod |
13,14 |
R327 |
T528 |
T524 |
punct |
",",14 |
R328 |
T529 |
T524 |
punct |
],14 |
R329 |
T530 |
T512 |
punct |
.,are |
R330 |
T532 |
T533 |
compound |
Cell,lines |
R331 |
T533 |
T534 |
nsubj |
lines,are |
R332 |
T535 |
T533 |
amod |
defective,lines |
R333 |
T536 |
T535 |
prep |
in,defective |
R334 |
T537 |
T538 |
preconj |
either,BRCA1 |
R335 |
T538 |
T536 |
pobj |
BRCA1,in |
R336 |
T539 |
T538 |
cc |
or,BRCA1 |
R337 |
T540 |
T538 |
conj |
BRCA2,BRCA1 |
R338 |
T541 |
T534 |
acomp |
sensitive,are |
R339 |
T542 |
T541 |
prep |
to,sensitive |
R340 |
T543 |
T544 |
amod |
damaging,agents |
R341 |
T544 |
T542 |
pobj |
agents,to |
R342 |
T545 |
T546 |
dep |
that,form |
R343 |
T546 |
T544 |
relcl |
form,agents |
R344 |
T547 |
T548 |
amod |
double,strand |
R345 |
T548 |
T550 |
amod |
strand,breaks |
R346 |
T549 |
T548 |
punct |
-,strand |
R347 |
T550 |
T546 |
dobj |
breaks,form |
R348 |
T551 |
T550 |
punct |
(,breaks |
R349 |
T552 |
T550 |
appos |
DSBs,breaks |
R350 |
T553 |
T534 |
punct |
),are |
R351 |
T554 |
T534 |
punct |
", ",are |
R352 |
T555 |
T556 |
mark |
as,are |
R353 |
T556 |
T534 |
advcl |
are,are |
R354 |
T557 |
T558 |
amod |
other,lines |
R355 |
T558 |
T556 |
nsubj |
lines,are |
R356 |
T559 |
T558 |
compound |
cell,lines |
R357 |
T560 |
T558 |
amod |
defective,lines |
R358 |
T561 |
T560 |
prep |
in,defective |
R359 |
T562 |
T563 |
amod |
recombinational,repair |
R360 |
T563 |
T561 |
pobj |
repair,in |
R361 |
T564 |
T565 |
punct |
(,reviewed |
R362 |
T565 |
T534 |
parataxis |
reviewed,are |
R363 |
T566 |
T565 |
prep |
in,reviewed |
R364 |
T567 |
T566 |
punct |
[,in |
R365 |
T568 |
T566 |
pobj |
15,in |
R366 |
T569 |
T566 |
punct |
],in |
R367 |
T570 |
T565 |
punct |
),reviewed |
R368 |
T571 |
T534 |
punct |
.,are |
R369 |
T573 |
T574 |
nsubj |
BRCA2,interacts |
R370 |
T575 |
T574 |
prep |
with,interacts |
R371 |
T576 |
T577 |
det |
the,recombinase |
R372 |
T577 |
T575 |
pobj |
recombinase,with |
R373 |
T578 |
T577 |
compound |
RAD51,recombinase |
R374 |
T579 |
T574 |
prep |
via,interacts |
R375 |
T580 |
T581 |
amod |
direct,contacts |
R376 |
T581 |
T579 |
pobj |
contacts,via |
R377 |
T582 |
T583 |
compound |
protein,protein |
R378 |
T583 |
T581 |
compound |
protein,contacts |
R379 |
T584 |
T583 |
punct |
-,protein |
R380 |
T585 |
T586 |
punct |
[,19 |
R381 |
T586 |
T574 |
parataxis |
19,interacts |
R382 |
T587 |
T586 |
nummod |
16,19 |
R383 |
T588 |
T586 |
punct |
",",19 |
R384 |
T589 |
T586 |
nummod |
17,19 |
R385 |
T590 |
T586 |
punct |
",",19 |
R386 |
T591 |
T586 |
nummod |
18,19 |
R387 |
T592 |
T586 |
punct |
",",19 |
R388 |
T593 |
T586 |
punct |
],19 |
R389 |
T594 |
T574 |
punct |
.,interacts |
R390 |
T596 |
T597 |
amod |
Biochemical,analysis |
R391 |
T597 |
T598 |
nsubj |
analysis,showed |
R392 |
T599 |
T598 |
advmod |
also,showed |
R393 |
T600 |
T598 |
dobj |
interaction,showed |
R394 |
T601 |
T600 |
prep |
between,interaction |
R395 |
T602 |
T601 |
pobj |
BRCA1,between |
R396 |
T603 |
T602 |
cc |
and,BRCA1 |
R397 |
T604 |
T602 |
conj |
RAD51,BRCA1 |
R398 |
T605 |
T598 |
punct |
", ",showed |
R399 |
T606 |
T607 |
mark |
although,been |
R400 |
T607 |
T598 |
advcl |
been,showed |
R401 |
T608 |
T609 |
det |
these,interactions |
R402 |
T609 |
T607 |
nsubj |
interactions,been |
R403 |
T610 |
T609 |
amod |
detected,interactions |
R404 |
T611 |
T607 |
aux |
may,been |
R405 |
T612 |
T607 |
aux |
have,been |
R406 |
T613 |
T607 |
acomp |
indirect,been |
R407 |
T614 |
T615 |
punct |
[,9 |
R408 |
T615 |
T598 |
parataxis |
9,showed |
R409 |
T616 |
T615 |
punct |
],9 |
R410 |
T617 |
T598 |
punct |
.,showed |
R411 |
T619 |
T620 |
det |
The,repeats |
R412 |
T620 |
T622 |
nsubj |
repeats,are |
R413 |
T621 |
T620 |
compound |
BRC,repeats |
R414 |
T623 |
T620 |
prep |
of,repeats |
R415 |
T624 |
T623 |
pobj |
BRCA2,of |
R416 |
T625 |
T622 |
acomp |
responsible,are |
R417 |
T626 |
T625 |
prep |
for,responsible |
R418 |
T627 |
T628 |
amod |
direct,interaction |
R419 |
T628 |
T626 |
pobj |
interaction,for |
R420 |
T629 |
T628 |
compound |
RAD51,interaction |
R421 |
T630 |
T622 |
punct |
.,are |
R422 |
T632 |
T633 |
nsubj |
Cells,fail |
R423 |
T634 |
T632 |
acl |
lacking,Cells |
R424 |
T635 |
T636 |
compound |
BRCA1,2 |
R425 |
T636 |
T634 |
dobj |
2,lacking |
R426 |
T637 |
T636 |
punct |
/,2 |
R427 |
T638 |
T639 |
aux |
to,form |
R428 |
T639 |
T633 |
xcomp |
form,fail |
R429 |
T640 |
T641 |
npadvmod |
damage,induced |
R430 |
T641 |
T643 |
amod |
induced,RAD51 |
R431 |
T642 |
T641 |
punct |
-,induced |
R432 |
T643 |
T645 |
compound |
RAD51,foci |
R433 |
T644 |
T643 |
amod |
subnuclear,RAD51 |
R434 |
T645 |
T639 |
dobj |
foci,form |
R435 |
T646 |
T639 |
prep |
with,form |
R436 |
T647 |
T648 |
amod |
normal,efficiency |
R437 |
T648 |
T646 |
pobj |
efficiency,with |
R438 |
T649 |
T633 |
punct |
", ",fail |
R439 |
T650 |
T633 |
advcl |
suggesting,fail |
R440 |
T651 |
T652 |
mark |
that,required |
R441 |
T652 |
T650 |
ccomp |
required,suggesting |
R442 |
T653 |
T654 |
det |
these,proteins |
R443 |
T654 |
T652 |
nsubjpass |
proteins,required |
R444 |
T655 |
T652 |
auxpass |
are,required |
R445 |
T656 |
T652 |
prep |
for,required |
R446 |
T657 |
T658 |
det |
the,formation |
R447 |
T658 |
T656 |
pobj |
formation,for |
R448 |
T659 |
T658 |
prep |
of,formation |
R449 |
T660 |
T661 |
compound |
recombinase,complexes |
R450 |
T661 |
T659 |
pobj |
complexes,of |
R451 |
T662 |
T658 |
prep |
at,formation |
R452 |
T663 |
T664 |
det |
the,sites |
R453 |
T664 |
T662 |
pobj |
sites,at |
R454 |
T665 |
T664 |
prep |
of,sites |
R455 |
T666 |
T667 |
compound |
DNA,damage |
R456 |
T667 |
T665 |
pobj |
damage,of |
R457 |
T668 |
T669 |
punct |
[,21 |
R458 |
T669 |
T633 |
parataxis |
21,fail |
R459 |
T670 |
T669 |
nummod |
20,21 |
R460 |
T671 |
T669 |
punct |
",",21 |
R461 |
T672 |
T669 |
punct |
],21 |
R462 |
T673 |
T633 |
punct |
.,fail |
R463 |
T675 |
T676 |
advmod |
Finally,shown |
R464 |
T677 |
T676 |
punct |
", ",shown |
R465 |
T678 |
T679 |
amod |
genetic,measurements |
R466 |
T679 |
T676 |
nsubj |
measurements,shown |
R467 |
T680 |
T679 |
prep |
of,measurements |
R468 |
T681 |
T682 |
compound |
recombination,frequency |
R469 |
T682 |
T680 |
pobj |
frequency,of |
R470 |
T683 |
T676 |
aux |
have,shown |
R471 |
T684 |
T685 |
mark |
that,are |
R472 |
T685 |
T676 |
ccomp |
are,shown |
R473 |
T686 |
T687 |
nmod |
Brca1,cells |
R474 |
T687 |
T685 |
nsubj |
cells,are |
R475 |
T688 |
T686 |
punct |
-,Brca1 |
R476 |
T689 |
T686 |
punct |
/,Brca1 |
R477 |
T690 |
T686 |
punct |
-,Brca1 |
R478 |
T691 |
T692 |
amod |
embryonic,stem |
R479 |
T692 |
T687 |
nmod |
stem,cells |
R480 |
T693 |
T692 |
punct |
(,stem |
R481 |
T694 |
T692 |
appos |
ES,stem |
R482 |
T695 |
T687 |
punct |
),cells |
R483 |
T696 |
T685 |
acomp |
deficient,are |
R484 |
T697 |
T696 |
prep |
in,deficient |
R485 |
T698 |
T699 |
amod |
recombinational,repair |
R486 |
T699 |
T697 |
pobj |
repair,in |
R487 |
T700 |
T699 |
compound |
DSB,repair |
R488 |
T701 |
T702 |
punct |
[,23 |
R489 |
T702 |
T676 |
parataxis |
23,shown |
R490 |
T703 |
T702 |
nummod |
22,23 |
R491 |
T704 |
T702 |
punct |
",",23 |
R492 |
T705 |
T702 |
punct |
],23 |
R493 |
T706 |
T676 |
punct |
.,shown |
R494 |
T708 |
T709 |
det |
The,similarity |
R495 |
T709 |
T710 |
nsubj |
similarity,led |
R496 |
T711 |
T709 |
prep |
between,similarity |
R497 |
T712 |
T711 |
pobj |
phenotypes,between |
R498 |
T713 |
T712 |
acl |
associated,phenotypes |
R499 |
T714 |
T713 |
prep |
with,associated |
R500 |
T715 |
T716 |
nmod |
BRCA1,deficiency |
R501 |
T716 |
T714 |
pobj |
deficiency,with |
R502 |
T717 |
T715 |
cc |
and,BRCA1 |
R503 |
T718 |
T715 |
conj |
BRCA2,BRCA1 |
R504 |
T719 |
T709 |
punct |
", ",similarity |
R505 |
T720 |
T721 |
advmod |
together,with |
R506 |
T721 |
T709 |
prep |
with,similarity |
R507 |
T722 |
T721 |
pobj |
data,with |
R508 |
T723 |
T722 |
acl |
showing,data |
R509 |
T724 |
T725 |
det |
a,effect |
R510 |
T725 |
T723 |
dobj |
effect,showing |
R511 |
T726 |
T725 |
amod |
similar,effect |
R512 |
T727 |
T725 |
prep |
of,effect |
R513 |
T728 |
T729 |
compound |
DNA,damage |
R514 |
T729 |
T727 |
pobj |
damage,of |
R515 |
T730 |
T729 |
prep |
on,damage |
R516 |
T731 |
T730 |
pobj |
distribution,on |
R517 |
T732 |
T731 |
prep |
of,distribution |
R518 |
T733 |
T732 |
pobj |
BRCA1,of |
R519 |
T734 |
T733 |
cc |
and,BRCA1 |
R520 |
T735 |
T733 |
conj |
BRCA2,BRCA1 |
R521 |
T736 |
T731 |
prep |
in,distribution |
R522 |
T737 |
T738 |
npadvmod |
repair,proficient |
R523 |
T738 |
T740 |
amod |
proficient,cells |
R524 |
T739 |
T738 |
punct |
-,proficient |
R525 |
T740 |
T736 |
pobj |
cells,in |
R526 |
T741 |
T710 |
punct |
", ",led |
R527 |
T742 |
T710 |
prep |
to,led |
R528 |
T743 |
T744 |
det |
the,hypothesis |
R529 |
T744 |
T742 |
pobj |
hypothesis,to |
R530 |
T745 |
T746 |
mark |
that,required |
R531 |
T746 |
T744 |
acl |
required,hypothesis |
R532 |
T747 |
T746 |
nsubjpass |
BRCA2,required |
R533 |
T748 |
T747 |
punct |
", ",BRCA2 |
R534 |
T749 |
T747 |
prep |
like,BRCA2 |
R535 |
T750 |
T749 |
pobj |
BRCA1,like |
R536 |
T751 |
T746 |
punct |
", ",required |
R537 |
T752 |
T746 |
auxpass |
is,required |
R538 |
T753 |
T746 |
prep |
for,required |
R539 |
T754 |
T755 |
amod |
efficient,repair |
R540 |
T755 |
T753 |
pobj |
repair,for |
R541 |
T756 |
T755 |
amod |
recombinational,repair |
R542 |
T757 |
T710 |
punct |
.,led |
R543 |
T759 |
T760 |
det |
The,paper |
R544 |
T760 |
T761 |
nsubj |
paper,provides |
R545 |
T762 |
T760 |
prep |
by,paper |
R546 |
T763 |
T762 |
pobj |
Moynahan,by |
R547 |
T764 |
T765 |
advmod |
et,al |
R548 |
T765 |
T763 |
advmod |
al,Moynahan |
R549 |
T766 |
T767 |
punct |
[,24 |
R550 |
T767 |
T760 |
parataxis |
24,paper |
R551 |
T768 |
T767 |
punct |
],24 |
R552 |
T769 |
T770 |
amod |
important,support |
R553 |
T770 |
T761 |
dobj |
support,provides |
R554 |
T771 |
T761 |
dative |
for,provides |
R555 |
T772 |
T773 |
det |
this,hypothesis |
R556 |
T773 |
T771 |
pobj |
hypothesis,for |
R557 |
T774 |
T761 |
punct |
.,provides |