SeeDev-binary@ldeleger:SeeDev-binary-14701918-5
Annnotations
Below, discontinuous spans are shown in the bag model. You can change it to the chain model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 28-32 | Gene | denotes | MUM4 |
| T3 | 40-64 | Tissue | denotes | Seed Coat Secretory Cell |
| T2 | 40-80 | Development_Phase | denotes | Seed Coat Secretory Cell Differentiation |
| E44 | 40-80 | Regulates_Expression | denotes | Seed Coat Secretory Cell Differentiation |
| T4 | 84-87 | Protein | denotes | AP2 |
| E3 | 84-87 | Regulates_Expression | denotes | AP2 |
| E39 | 84-87 | Exists_At_Stage | denotes | AP2 |
| T5 | 89-93 | Protein | denotes | TTG1 |
| E1 | 89-93 | Regulates_Expression | denotes | TTG1 |
| E38 | 89-93 | Exists_At_Stage | denotes | TTG1 |
| T6 | 99-102 | Protein | denotes | GL2 |
| E9 | 99-102 | Regulates_Expression | denotes | GL2 |
| E41 | 99-102 | Exists_At_Stage | denotes | GL2 |
| T8 | 103-107 | Gene | denotes | MUM4 |
| T7 | 103-118 | RNA | denotes | MUM4 transcript |
| E27 | 103-118 | Exists_At_Stage | denotes | MUM4 transcript |
| T9 | 132-156 | Development_Phase | denotes | differentiating siliques |
| T10 | 148-156 | Tissue | denotes | siliques |
| T11 | 172-191 | Pathway | denotes | mucilage production |
| T12 | 261-280 | Tissue | denotes | seed coat epidermis |
| T13 | 292-313 | Pathway | denotes | mucilage biosynthesis |
| E28 | 292-313 | Is_Localized_In | denotes | mucilage biosynthesis |
| T14 | 360-371 | Genotype | denotes | mum4 plants |
| T15 | 386-405 | Tissue | denotes | seed coat epidermis |
| T16 | 415-419 | Gene | denotes | MUM4 |
| T17 | 457-465 | Tissue | denotes | siliques |
| E2 | 457-465 | Regulates_Expression | denotes | siliques |
| T18 | 469-472 | Genotype | denotes | ap2 |
| E24 | 469-472 | Regulates_Process | denotes | ap2 |
| E42 | 469-472 | Regulates_Expression | denotes | ap2 |
| T19 | 494-545 | Regulatory_Network | denotes | differentiate the outer two layers of the seed coat |
| T20 | 512-545 | Tissue | denotes | outer two layers of the seed coat |
| T21 | 536-545 | Tissue | denotes | seed coat |
| T22 | 591-609 | Protein_Family | denotes | NDP-l-Rha synthase |
| E20 | 591-609 | Regulates_Process | denotes | NDP-l-Rha synthase |
| E26 | 591-609 | Regulates_Process | denotes | NDP-l-Rha synthase |
| T23 | 655-694 | Pathway | denotes | production of the large quantity of RGI |
| E21 | 655-694 | Regulates_Process | denotes | production of the large quantity of RGI |
| T24 | 708-726 | Pathway | denotes | mucilage synthesis |
| T25 | 792-808 | Pathway | denotes | Rha biosynthesis |
| E22 | 792-808 | Regulates_Process | denotes | Rha biosynthesis |
| T26 | 852-868 | Pathway | denotes | RGI biosynthesis |
| T27 | 893-897 | Gene | denotes | MUM4 |
| T28 | 928-932 | Genotype | denotes | ttg1 |
| E11 | 928-932 | Regulates_Expression | denotes | ttg1 |
| T29 | 937-940 | Genotype | denotes | gl2 |
| E7 | 937-940 | Regulates_Expression | denotes | gl2 |
| T30 | 968-977 | Genotype | denotes | wild type |
| E8 | 968-977 | Regulates_Expression | denotes | wild type |
| T31 | 981-985 | Genotype | denotes | ttg2 |
| E5 | 981-985 | Regulates_Expression | denotes | ttg2 |
| T32 | 990-995 | Genotype | denotes | myb61 |
| E4 | 990-995 | Regulates_Expression | denotes | myb61 |
| T34 | 1063-1086 | Tissue | denotes | mucilage secretory cell |
| T33 | 1063-1102 | Development_Phase | denotes | mucilage secretory cell differentiation |
| T35 | 1156-1177 | Pathway | denotes | mucilage biosynthesis |
| T36 | 1185-1194 | Tissue | denotes | seed coat |
| E25 | 1185-1194 | Regulates_Process | denotes | seed coat |
| T37 | 1238-1242 | Protein | denotes | TTG1 |
| E10 | 1238-1242 | Regulates_Expression | denotes | TTG1 |
| T38 | 1247-1250 | Protein | denotes | GL2 |
| E13 | 1247-1250 | Regulates_Expression | denotes | GL2 |
| T39 | 1280-1284 | Gene | denotes | MUM4 |
| T40 | 1304-1321 | Tissue | denotes | epidermal systems |
| T41 | 1331-1340 | Tissue | denotes | trichomes |
| T42 | 1345-1355 | Tissue | denotes | root hairs |
| T43 | 1357-1361 | Protein | denotes | TTG1 |
| E14 | 1357-1361 | Regulates_Expression | denotes | TTG1 |
| E15 | 1357-1361 | Interacts_With | denotes | TTG1 |
| E19 | 1357-1361 | Interacts_With | denotes | TTG1 |
| E46 | 1357-1361 | Is_Linked_To | denotes | TTG1 |
| E47 | 1357-1361 | Is_Linked_To | denotes | TTG1 |
| T44 | 1412-1415 | Protein_Family | denotes | MYB |
| T46 | 1436-1440 | Protein_Domain | denotes | bHLH |
| T45 | 1436-1448 | Protein_Family | denotes | bHLH protein |
| T47 | 1449-1456 | Protein | denotes | GLABRA3 |
| E18 | 1449-1456 | Interacts_With | denotes | GLABRA3 |
| E33 | 1449-1456 | Is_Member_Of_Family | denotes | GLABRA3 |
| E48 | 1449-1456 | Is_Linked_To | denotes | GLABRA3 |
| E49 | 1449-1456 | Is_Linked_To | denotes | GLABRA3 |
| T48 | 1510-1513 | Gene | denotes | GL2 |
| T49 | 1554-1572 | Tissue | denotes | seed coat-specific |
| E23 | 1554-1572 | Regulates_Development_Phase | denotes | seed coat-specific |
| T51 | 1584-1588 | Protein | denotes | TTG1 |
| T50 | 1584-1597 | Protein_Complex | denotes | TTG1-bHLH-MYB |
| E6 | 1584-1597 | Regulates_Expression | denotes | TTG1-bHLH-MYB |
| E29 | 1584-1597 | Is_Localized_In | denotes | TTG1-bHLH-MYB |
| E40 | 1584-1597 | Exists_At_Stage | denotes | TTG1-bHLH-MYB |
| T52 | 1589-1593 | Protein_Domain | denotes | bHLH |
| T53 | 1594-1597 | Protein_Family | denotes | MYB |
| T54 | 1619-1622 | Gene | denotes | GL2 |
| E12 | 1619-1622 | Regulates_Expression | denotes | GL2 |
| T55 | 1659-1663 | Gene | denotes | MUM4 |
| T56 | 1671-1690 | Development_Phase | denotes | mucilage production |
| E43 | 1671-1690 | Regulates_Expression | denotes | mucilage production |
| E45 | 1671-1690 | Regulates_Expression | denotes | mucilage production |
| T57 | 1729-1733 | Protein | denotes | EGL3 |
| E17 | 1729-1733 | Interacts_With | denotes | EGL3 |
| E34 | 1729-1733 | Is_Member_Of_Family | denotes | EGL3 |
| E36 | 1729-1733 | Is_Localized_In | denotes | EGL3 |
| T58 | 1735-1754 | Protein | denotes | ENHANCER OF GLABRA3 |
| E31 | 1735-1754 | Is_Functionally_Equivalent_To | denotes | ENHANCER OF GLABRA3 |
| T59 | 1763-1766 | Protein | denotes | TT8 |
| E16 | 1763-1766 | Interacts_With | denotes | TT8 |
| E32 | 1763-1766 | Is_Member_Of_Family | denotes | TT8 |
| E35 | 1763-1766 | Is_Localized_In | denotes | TT8 |
| T60 | 1768-1786 | Protein | denotes | TRANSPARENT TESTA8 |
| E30 | 1768-1786 | Is_Functionally_Equivalent_To | denotes | TRANSPARENT TESTA8 |
| T62 | 1796-1800 | Protein_Domain | denotes | bHLH |
| T61 | 1796-1809 | Protein_Family | denotes | bHLH proteins |
| T63 | 1822-1826 | Protein | denotes | TTG1 |
| E37 | 1822-1826 | Is_Localized_In | denotes | TTG1 |
| T64 | 1834-1843 | Tissue | denotes | seed coat |
| R1 | E1 | T5 | Agent | TTG1,TTG1 |
| R10 | E5 | T27 | DNA | ttg2,MUM4 |
| R11 | E6 | T50 | Agent | TTG1-bHLH-MYB,TTG1-bHLH-MYB |
| R12 | E6 | T54 | DNA | TTG1-bHLH-MYB,GL2 |
| R13 | E7 | T29 | Agent | gl2,gl2 |
| R14 | E7 | T27 | DNA | gl2,MUM4 |
| R15 | E8 | T30 | Agent | wild type,wild type |
| R16 | E8 | T27 | DNA | wild type,MUM4 |
| R17 | E9 | T6 | Agent | GL2,GL2 |
| R18 | E9 | T1 | DNA | GL2,MUM4 |
| R19 | E10 | T37 | Agent | TTG1,TTG1 |
| R2 | E1 | T1 | DNA | TTG1,MUM4 |
| R20 | E10 | T39 | DNA | TTG1,MUM4 |
| R21 | E11 | T28 | Agent | ttg1,ttg1 |
| R22 | E11 | T27 | DNA | ttg1,MUM4 |
| R23 | E12 | T54 | Agent | GL2,GL2 |
| R24 | E12 | T55 | DNA | GL2,MUM4 |
| R25 | E13 | T38 | Agent | GL2,GL2 |
| R26 | E13 | T39 | DNA | GL2,MUM4 |
| R27 | E14 | T43 | Agent | TTG1,TTG1 |
| R28 | E14 | T48 | DNA | TTG1,GL2 |
| R29 | E15 | T43 | Agent | TTG1,TTG1 |
| R3 | E2 | T17 | Agent | siliques,siliques |
| R30 | E15 | T44 | Target | TTG1,MYB |
| R31 | E16 | T59 | Agent | TT8,TT8 |
| R32 | E16 | T63 | Target | TT8,TTG1 |
| R33 | E17 | T57 | Agent | EGL3,EGL3 |
| R34 | E17 | T63 | Target | EGL3,TTG1 |
| R35 | E18 | T47 | Agent | GLABRA3,GLABRA3 |
| R36 | E18 | T44 | Target | GLABRA3,MYB |
| R37 | E19 | T43 | Agent | TTG1,TTG1 |
| R38 | E19 | T47 | Target | TTG1,GLABRA3 |
| R39 | E20 | T22 | Agent | NDP-l-Rha synthase,NDP-l-Rha synthase |
| R4 | E2 | T16 | DNA | siliques,MUM4 |
| R40 | E20 | T25 | Process | NDP-l-Rha synthase,Rha biosynthesis |
| R41 | E21 | T23 | Agent | production of the large quantity of RGI,production of the large quantity of RGI |
| R42 | E21 | T24 | Process | production of the large quantity of RGI,mucilage synthesis |
| R43 | E22 | T25 | Agent | Rha biosynthesis,Rha biosynthesis |
| R44 | E22 | T26 | Process | Rha biosynthesis,RGI biosynthesis |
| R45 | E23 | T49 | Agent | seed coat-specific,seed coat-specific |
| R46 | E23 | T56 | Development | seed coat-specific,mucilage production |
| R47 | E24 | T18 | Agent | ap2,ap2 |
| R48 | E24 | T19 | Process | ap2,differentiate the outer two layers of the seed coat |
| R49 | E25 | T36 | Agent | seed coat,seed coat |
| R5 | E3 | T4 | Agent | AP2,AP2 |
| R50 | E25 | T35 | Process | seed coat,mucilage biosynthesis |
| R51 | E26 | T22 | Agent | NDP-l-Rha synthase,NDP-l-Rha synthase |
| R52 | E26 | T23 | Process | NDP-l-Rha synthase,production of the large quantity of RGI |
| R53 | E27 | T7 | Functional_Molecule | MUM4 transcript,MUM4 transcript |
| R54 | E27 | T9 | Development | MUM4 transcript,differentiating siliques |
| R55 | E28 | T13 | Process | mucilage biosynthesis,mucilage biosynthesis |
| R56 | E28 | T12 | Target_Tissue | mucilage biosynthesis,seed coat epidermis |
| R57 | E29 | T50 | Functional_Molecule | TTG1-bHLH-MYB,TTG1-bHLH-MYB |
| R58 | E29 | T49 | Target_Tissue | TTG1-bHLH-MYB,seed coat-specific |
| R59 | E30 | T60 | Element1 | TRANSPARENT TESTA8,TRANSPARENT TESTA8 |
| R6 | E3 | T1 | DNA | AP2,MUM4 |
| R60 | E30 | T59 | Element2 | TRANSPARENT TESTA8,TT8 |
| R61 | E31 | T58 | Element1 | ENHANCER OF GLABRA3,ENHANCER OF GLABRA3 |
| R62 | E31 | T57 | Element2 | ENHANCER OF GLABRA3,EGL3 |
| R63 | E32 | T59 | Element | TT8,TT8 |
| R64 | E32 | T61 | Family | TT8,bHLH proteins |
| R65 | E33 | T47 | Element | GLABRA3,GLABRA3 |
| R66 | E33 | T45 | Family | GLABRA3,bHLH protein |
| R67 | E34 | T57 | Element | EGL3,EGL3 |
| R68 | E34 | T61 | Family | EGL3,bHLH proteins |
| R69 | E35 | T59 | Functional_Molecule | TT8,TT8 |
| R7 | E4 | T32 | Agent | myb61,myb61 |
| R70 | E35 | T64 | Target_Tissue | TT8,seed coat |
| R71 | E36 | T57 | Functional_Molecule | EGL3,EGL3 |
| R72 | E36 | T64 | Target_Tissue | EGL3,seed coat |
| R73 | E37 | T63 | Functional_Molecule | TTG1,TTG1 |
| R74 | E37 | T64 | Target_Tissue | TTG1,seed coat |
| R75 | E38 | T5 | Functional_Molecule | TTG1,TTG1 |
| R76 | E38 | T2 | Development | TTG1,Seed Coat Secretory Cell Differentiation |
| R77 | E39 | T4 | Functional_Molecule | AP2,AP2 |
| R78 | E39 | T2 | Development | AP2,Seed Coat Secretory Cell Differentiation |
| R79 | E40 | T50 | Functional_Molecule | TTG1-bHLH-MYB,TTG1-bHLH-MYB |
| R8 | E4 | T27 | DNA | myb61,MUM4 |
| R80 | E40 | T56 | Development | TTG1-bHLH-MYB,mucilage production |
| R81 | E41 | T6 | Functional_Molecule | GL2,GL2 |
| R82 | E41 | T2 | Development | GL2,Seed Coat Secretory Cell Differentiation |
| R83 | E42 | T18 | Agent | ap2,ap2 |
| R84 | E42 | T16 | DNA | ap2,MUM4 |
| R85 | E43 | T56 | Agent | mucilage production,mucilage production |
| R86 | E43 | T54 | DNA | mucilage production,GL2 |
| R87 | E44 | T2 | Agent | Seed Coat Secretory Cell Differentiation,Seed Coat Secretory Cell Differentiation |
| R88 | E44 | T1 | DNA | Seed Coat Secretory Cell Differentiation,MUM4 |
| R89 | E45 | T56 | Agent | mucilage production,mucilage production |
| R9 | E5 | T31 | Agent | ttg2,ttg2 |
| R90 | E45 | T55 | DNA | mucilage production,MUM4 |
| R91 | E46 | T43 | Agent1 | TTG1,TTG1 |
| R92 | E46 | T43 | Agent2 | TTG1,TTG1 |
| R93 | E47 | T43 | Agent1 | TTG1,TTG1 |
| R94 | E47 | T48 | Agent2 | TTG1,GL2 |
| R95 | E48 | T47 | Agent1 | GLABRA3,GLABRA3 |
| R96 | E48 | T43 | Agent2 | GLABRA3,TTG1 |
| R97 | E49 | T47 | Agent1 | GLABRA3,GLABRA3 |
| R98 | E49 | T48 | Agent2 | GLABRA3,GL2 |