SeeDev-binary@ldeleger:SeeDev-binary-14701918-3 JSONTXT

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bionlp-ost-19-SeeDev-bin-train

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T1 4-26 Pathway denotes production of mucilage
T2 34-78 Tissue denotes epidermal cells of the Arabidopsis seed coat
T3 34-49 Tissue denotes epidermal cells
T4 57-68 Genotype denotes Arabidopsis
T5 69-78 Tissue denotes seed coat
T6 104-125 Regulatory_Network denotes developmental process
T7 143-154 Development_Phase denotes cell growth
T8-1 168-180,221-230 Pathway denotes biosynthesis of pectin
T9-1 185-200,221-230 Pathway denotes polar secretion of pectin
T10 232-265 Regulatory_Network denotes formation of a cytoplasmic column
T11 274-298 Regulatory_Network denotes cytoplasmic constriction
T12 303-323 Regulatory_Network denotes vacuolar contraction
T13 343-377 Regulatory_Network denotes synthesis of a secondary cell wall
T14 458-476 Pathway denotes Seed coat mucilage
T15 458-467 Tissue denotes Seed coat
T16 523-534 Genotype denotes Arabidopsis
T17 539-542 Genotype denotes mum
T18 544-561 Genotype denotes mucilage-modified
T19 581-600 Pathway denotes mucilage production
T20-1 672-684,705-709 Genotype denotes Mutations in MUM4
T21 705-709 Gene denotes MUM4
T22-1 735-743,751-759 Pathway denotes mucilage released
T23 765-786 Tissue denotes hydrated mature seeds
T24 866-897 Development_Phase denotes seed coat epidermal development
T25 866-885 Tissue denotes seed coat epidermal
T26 866-875 Tissue denotes seed coat
T27 866-870 Tissue denotes seed
T28 941-946 Tissue denotes seeds
T29 960-976 Pathway denotes release mucilage
T30 982-991 Environmental_Factor denotes hydration
T31 993-1007 Genotype denotes Mutants in AP2
T32 1004-1007 Gene denotes AP2
T33 1009-1017 Gene denotes APETALA2
T34 1041-1072 Regulatory_Network denotes defects in floral morphogenesis
T35 1052-1072 Development_Phase denotes floral morphogenesis
T36 1074-1144 Regulatory_Network denotes lack differentiation past the growth phase of mucilage secretory cells
T37 1104-1116 Development_Phase denotes growth phase
T38 1120-1144 Tissue denotes mucilage secretory cells
T39 1120-1128 Pathway denotes mucilage
T40 1190-1194 Gene denotes TTG1
T41 1196-1221 Gene denotes TRANSPARENT TESTA GLABRA1
T42 1224-1228 Gene denotes TTG2
T43 1234-1237 Gene denotes GL2
T44 1239-1246 Gene denotes GLABRA2
T45 1304-1326 Regulatory_Network denotes trichome specification
T46 1304-1312 Tissue denotes trichome
T47-2 1333-1343,1349-1357,1372-1382 Regulatory_Network denotes defects in mucilage production
T48-1 1333-1343,1362-1382 Regulatory_Network denotes defects in columella production
T49-1 1349-1357,1372-1382 Pathway denotes mucilage production
T50 1362-1382 Pathway denotes columella production
T51 1390-1399 Tissue denotes seed coat
T52 1543-1552 Tissue denotes trichomes
T53 1557-1567 Tissue denotes root hairs
T54 1573-1577 Protein denotes TTG1
T56 1595-1617 Protein_Domain denotes basic helix-loop-helix
T55-1 1595-1617,1625-1632 Protein_Family denotes basic helix-loop-helix protein
T57 1619-1623 Protein_Domain denotes bHLH
T58 1655-1658 Protein_Family denotes MYB
T59 1684-1687 Gene denotes GL2
T60 1692-1696 Gene denotes TTG2
T61 1771-1789 Genotype denotes mutations in MYB61
T62 1784-1789 Gene denotes MYB61
T63-1 1834-1842,1857-1867 Pathway denotes mucilage production
T64 1847-1867 Pathway denotes columella production
T65 1875-1886 Genotype denotes Arabidopsis
T66 1887-1896 Tissue denotes seed coat
T67 1982-1986 Gene denotes MUM4
T68 1994-2034 Development_Phase denotes development of the Arabidopsis seed coat
T69 2013-2024 Genotype denotes Arabidopsis
T70 2025-2034 Tissue denotes seed coat
T71 2064-2068 Gene denotes MUM4
T72 2090-2094 Gene denotes MUM4
T73 2114-2132 Protein_Family denotes NDP-l-Rha synthase
T74 2165-2198 Regulatory_Network denotes reduced mucilage in the seed coat
T75 2189-2198 Tissue denotes seed coat
T76 2206-2223 Regulatory_Network denotes altered columella
T77 2254-2258 Gene denotes MUM4
T79 2254-2258 Gene denotes MUM4
T78-1 2254-2258,2335-2345 RNA denotes MUM4 transcript
T80 2295-2320 Development_Phase denotes seed coat differentiation
T81 2295-2304 Tissue denotes seed coat
T82 2374-2401 Development_Phase denotes time of mucilage production
T83 2382-2401 Pathway denotes mucilage production
T84 2416-2420 Gene denotes MUM4
T85 2507-2510 Protein denotes AP2
T86 2512-2516 Protein denotes TTG1
T87 2522-2525 Protein denotes GL2
T88 2571-2590 Pathway denotes mucilage production
T89 2613-2638 Tissue denotes seed coat epidermal cells
T90 2613-2622 Tissue denotes seed coat
T91 2613-2617 Tissue denotes seed
T92 2693-2728 Regulatory_Network denotes seed coat epidermal differentiation
T93 2693-2702 Tissue denotes seed coat
E1 2512-2516 Regulates_Expression denotes TTG1
E2 2522-2525 Regulates_Expression denotes GL2
E3 2507-2510 Regulates_Expression denotes AP2
E4 2295-2320 Regulates_Expression denotes seed coat differentiation
E5 1573-1577 Regulates_Expression denotes TTG1
E6 1573-1577 Regulates_Expression denotes TTG1
E7 1573-1577 Interacts_With denotes TTG1
E8 1573-1577 Interacts_With denotes TTG1
E9 1234-1237 Regulates_Process denotes GL2
E10 1190-1194 Regulates_Process denotes TTG1
E11 1224-1228 Regulates_Process denotes TTG2
E12 1190-1194 Regulates_Process denotes TTG1
E13 1190-1194 Regulates_Process denotes TTG1
E14 1771-1789 Regulates_Process denotes mutations in MYB61
E15 274-298 Regulates_Process denotes cytoplasmic constriction
E16 765-786 Regulates_Process denotes hydrated mature seeds
E17 1234-1237 Regulates_Process denotes GL2
E18 1224-1228 Regulates_Process denotes TTG2
E19 303-323 Regulates_Process denotes vacuolar contraction
E20 993-1007 Regulates_Process denotes Mutants in AP2
E21 982-991 Regulates_Process denotes hydration
E22 1234-1237 Regulates_Process denotes GL2
E23 539-542 Regulates_Process denotes mum
E24 1771-1789 Regulates_Process denotes mutations in MYB61
E25 1224-1228 Regulates_Process denotes TTG2
E26 993-1007 Regulates_Process denotes Mutants in AP2
E27 4-26 Is_Localized_In denotes production of mucilage
E28 458-476 Is_Localized_In denotes Seed coat mucilage
E29 1595-1617 Is_Functionally_Equivalent_To denotes basic helix-loop-helix
E30 1239-1246 Is_Functionally_Equivalent_To denotes GLABRA2
E31 1196-1221 Is_Functionally_Equivalent_To denotes TRANSPARENT TESTA GLABRA1
E32 1009-1017 Is_Functionally_Equivalent_To denotes APETALA2
E33 2374-2401 Regulates_Accumulation denotes time of mucilage production
E34 2090-2094 Transcribes_Or_Translates_To denotes MUM4
E35 1390-1399 Regulates_Expression denotes seed coat
E36 1390-1399 Regulates_Expression denotes seed coat
E37 1390-1399 Regulates_Expression denotes seed coat
E38 1573-1577 Is_Localized_In denotes TTG1
E39 1573-1577 Is_Localized_In denotes TTG1
E40 982-991 Is_Linked_To denotes hydration
E41 1543-1552 Regulates_Expression denotes trichomes
E42 1543-1552 Regulates_Expression denotes trichomes
E43 1557-1567 Regulates_Expression denotes root hairs
E44 1557-1567 Regulates_Expression denotes root hairs
E45 1887-1896 Regulates_Process denotes seed coat
E46-1 672-684,705-709 Regulates_Process denotes Mutations in MUM4
E47 1390-1399 Regulates_Process denotes seed coat
E48 1390-1399 Regulates_Process denotes seed coat
E49 941-946 Regulates_Process denotes seeds
E50 1887-1896 Regulates_Process denotes seed coat
E51 1619-1623 Is_Linked_To denotes bHLH
E52 1655-1658 Is_Linked_To denotes MYB
E53 1573-1577 Is_Linked_To denotes TTG1
E54 1619-1623 Is_Linked_To denotes bHLH
E55 1619-1623 Is_Linked_To denotes bHLH
E56 1573-1577 Is_Linked_To denotes TTG1
E57 1573-1577 Is_Linked_To denotes TTG1
E58 1655-1658 Is_Linked_To denotes MYB
E59 1655-1658 Is_Linked_To denotes MYB
R59 E30 T44 Element1 GLABRA2,GLABRA2
R1 E1 T86 Agent TTG1,TTG1
R2 E1 T84 DNA TTG1,MUM4
R3 E2 T87 Agent GL2,GL2
R4 E2 T84 DNA GL2,MUM4
R5 E3 T85 Agent AP2,AP2
R6 E3 T84 DNA AP2,MUM4
R7 E4 T80 Agent seed coat differentiation,seed coat differentiation
R8 E4 T77 DNA seed coat differentiation,MUM4
R9 E5 T54 Agent TTG1,TTG1
R10 E5 T60 DNA TTG1,TTG2
R11 E6 T54 Agent TTG1,TTG1
R12 E6 T59 DNA TTG1,GL2
R13 E7 T54 Agent TTG1,TTG1
R14 E7 T58 Target TTG1,MYB
R15 E8 T54 Agent TTG1,TTG1
R16 E8 T57 Target TTG1,bHLH
R17 E9 T43 Agent GL2,GL2
R18 E9 T48-0 Process GL2,
R19 E10 T40 Agent TTG1,TTG1
R20 E10 T45 Process TTG1,trichome specification
R21 E11 T42 Agent TTG2,TTG2
R22 E11 T47-0 Process TTG2,
R23 E12 T40 Agent TTG1,TTG1
R24 E12 T47-0 Process TTG1,
R25 E13 T40 Agent TTG1,TTG1
R26 E13 T48-0 Process TTG1,
R27 E14 T61 Agent mutations in MYB61,mutations in MYB61
R28 E14 T64 Process mutations in MYB61,columella production
R29 E15 T11 Agent cytoplasmic constriction,cytoplasmic constriction
R30 E15 T10 Process cytoplasmic constriction,"formation of a cytoplasmic column"
R31 E16 T23 Agent hydrated mature seeds,hydrated mature seeds
R32 E16 T22-0 Process hydrated mature seeds,
R33 E17 T43 Agent GL2,GL2
R34 E17 T47-0 Process GL2,
R35 E18 T42 Agent TTG2,TTG2
R36 E18 T48-0 Process TTG2,
R37 E19 T12 Agent vacuolar contraction,vacuolar contraction
R38 E19 T10 Process vacuolar contraction,"formation of a cytoplasmic column"
R39 E20 T31 Agent Mutants in AP2,Mutants in AP2
R40 E20 T34 Process Mutants in AP2,defects in floral morphogenesis
R41 E21 T30 Agent hydration,hydration
R42 E21 T29 Process hydration,release mucilage
R43 E22 T43 Agent GL2,GL2
R44 E22 T45 Process GL2,trichome specification
R45 E23 T17 Agent mum,mum
R46 E23 T19 Process mum,mucilage production
R47 E24 T61 Agent mutations in MYB61,mutations in MYB61
R48 E24 T63-0 Process mutations in MYB61,
R49 E25 T42 Agent TTG2,TTG2
R50 E25 T45 Process TTG2,trichome specification
R51 E26 T31 Agent Mutants in AP2,Mutants in AP2
R52 E26 T36 Process Mutants in AP2,"lack differentiation past the growth phase of mucilage secretory cells"
R53 E27 T1 Process production of mucilage,production of mucilage
R54 E27 T2 Target_Tissue production of mucilage,epidermal cells of the Arabidopsis seed coat
R55 E28 T14 Process Seed coat mucilage,Seed coat mucilage
R56 E28 T15 Target_Tissue Seed coat mucilage,Seed coat
R57 E29 T56 Element1 basic helix-loop-helix,basic helix-loop-helix
R58 E29 T57 Element2 basic helix-loop-helix,bHLH
R60 E30 T43 Element2 GLABRA2,GL2
R61 E31 T41 Element1 TRANSPARENT TESTA GLABRA1,TRANSPARENT TESTA GLABRA1
R62 E31 T40 Element2 TRANSPARENT TESTA GLABRA1,TTG1
R63 E32 T33 Element1 APETALA2,APETALA2
R64 E32 T32 Element2 APETALA2,AP2
R65 E33 T82 Agent "time of mucilage production","time of mucilage production"
R66 E33 T78-0 Functional_Molecule "time of mucilage production",
R67 E34 T72 Source MUM4,MUM4
R68 E34 T73 Product MUM4,NDP-l-Rha synthase
R69 E35 T51 Agent seed coat,seed coat
R70 E35 T40 DNA seed coat,TTG1
R71 E36 T51 Agent seed coat,seed coat
R72 E36 T43 DNA seed coat,GL2
R73 E37 T51 Agent seed coat,seed coat
R74 E37 T42 DNA seed coat,TTG2
R75 E38 T54 Functional_Molecule TTG1,TTG1
R76 E38 T52 Target_Tissue TTG1,trichomes
R77 E39 T54 Functional_Molecule TTG1,TTG1
R78 E39 T53 Target_Tissue TTG1,root hairs
R79 E40 T30 Agent1 hydration,hydration
R80 E40 T28 Agent2 hydration,seeds
R81 E41 T52 Agent trichomes,trichomes
R82 E41 T59 DNA trichomes,GL2
R83 E42 T52 Agent trichomes,trichomes
R84 E42 T60 DNA trichomes,TTG2
R85 E43 T53 Agent root hairs,root hairs
R86 E43 T60 DNA root hairs,TTG2
R87 E44 T53 Agent root hairs,root hairs
R88 E44 T59 DNA root hairs,GL2
R89 E45 T66 Agent seed coat,seed coat
R90 E45 T64 Process seed coat,columella production
R91 E46-0 T20-0 Agent ,
R92 E46-0 T22-0 Process ,
R93 E47 T51 Agent seed coat,seed coat
R94 E47 T47-0 Process seed coat,
R95 E48 T51 Agent seed coat,seed coat
R96 E48 T48-0 Process seed coat,
R97 E49 T28 Agent seeds,seeds
R98 E49 T29 Process seeds,release mucilage
R99 E50 T66 Agent seed coat,seed coat
R100 E50 T63-0 Process seed coat,
R101 E51 T57 Agent1 bHLH,bHLH
R102 E51 T59 Agent2 bHLH,GL2
R103 E52 T58 Agent1 MYB,MYB
R104 E52 T60 Agent2 MYB,TTG2
R105 E53 T54 Agent1 TTG1,TTG1
R106 E53 T60 Agent2 TTG1,TTG2
R107 E54 T57 Agent1 bHLH,bHLH
R108 E54 T54 Agent2 bHLH,TTG1
R109 E55 T57 Agent1 bHLH,bHLH
R110 E55 T60 Agent2 bHLH,TTG2
R111 E56 T54 Agent1 TTG1,TTG1
R112 E56 T54 Agent2 TTG1,TTG1
R113 E57 T54 Agent1 TTG1,TTG1
R114 E57 T59 Agent2 TTG1,GL2
R115 E58 T58 Agent1 MYB,MYB
R116 E58 T54 Agent2 MYB,TTG1
R117 E59 T58 Agent1 MYB,MYB
R118 E59 T59 Agent2 MYB,GL2