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PubMed:21684788 / 61-326 JSONTXT

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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T2 0-265 Sentence denotes Sjögren-Larsson syndrome (SLS) is an autosomal recessive disorder characterized by ichthyosis, mental retardation, spasticity and mutations in the ALDH3A2 gene for fatty aldehyde dehydrogenase, an enzyme that catalyzes the oxidation of fatty aldehyde to fatty acid.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
8695 0-24 DiseaseOrPhenotypicFeature denotes Sjögren-Larsson syndrome MESH:D016111
8696 26-29 DiseaseOrPhenotypicFeature denotes SLS MESH:D016111
8697 37-65 DiseaseOrPhenotypicFeature denotes autosomal recessive disorder MESH:D030342
8698 83-93 DiseaseOrPhenotypicFeature denotes ichthyosis MESH:D007057
8699 95-113 DiseaseOrPhenotypicFeature denotes mental retardation MESH:D008607
8700 115-125 DiseaseOrPhenotypicFeature denotes spasticity MESH:D009128
8701 147-154 GeneOrGeneProduct denotes ALDH3A2 NCBIGene:224
8702 164-192 GeneOrGeneProduct denotes fatty aldehyde dehydrogenase NCBIGene:224
8703 236-250 ChemicalEntity denotes fatty aldehyde MESH:C001634
8704 254-264 ChemicalEntity denotes fatty acid MESH:D005227

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T2 0-24 DiseaseOrPhenotypicFeature denotes Sjögren-Larsson syndrome 0010031
T3 83-93 DiseaseOrPhenotypicFeature denotes ichthyosis 0019269

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T3 16-24 GeneOrGeneProduct denotes syndrome
T4 83-93 GeneOrGeneProduct denotes ichthyosis
T5 115-125 GeneOrGeneProduct denotes spasticity
T6 130-139 GeneOrGeneProduct denotes mutations
T7 147-154 GeneOrGeneProduct denotes ALDH3A2
T8 164-192 GeneOrGeneProduct denotes fatty aldehyde dehydrogenase
T9 197-203 GeneOrGeneProduct denotes enzyme
T10 236-241 GeneOrGeneProduct denotes fatty
T11 254-259 GeneOrGeneProduct denotes fatty
T12 260-264 GeneOrGeneProduct denotes acid

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T3 16-24 GeneOrGeneProduct denotes syndrome
T4 83-93 GeneOrGeneProduct denotes ichthyosis
T5 147-154 GeneOrGeneProduct denotes ALDH3A2
T6 164-192 GeneOrGeneProduct denotes fatty aldehyde dehydrogenase
T7 197-203 GeneOrGeneProduct denotes enzyme
T8 260-264 GeneOrGeneProduct denotes acid

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T2 0-24 DiseaseOrPhenotypicFeature denotes Sjögren-Larsson syndrome D016111
T3 26-29 DiseaseOrPhenotypicFeature denotes SLS D016111
T4 37-65 DiseaseOrPhenotypicFeature denotes autosomal recessive disorder DISEASE
T5 83-93 DiseaseOrPhenotypicFeature denotes ichthyosis D007057
T6 95-113 DiseaseOrPhenotypicFeature denotes mental retardation D008607
T7 115-125 DiseaseOrPhenotypicFeature denotes spasticity D009128

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 147-154 GeneOrGeneProduct denotes ALDH3A2
T2 164-192 GeneOrGeneProduct denotes fatty aldehyde dehydrogenase

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T2 0-24 DiseaseOrPhenotypicFeature denotes Sjögren-Larsson syndrome 0010031
T3 26-29 DiseaseOrPhenotypicFeature denotes SLS 0700001|0010031
T5 83-93 DiseaseOrPhenotypicFeature denotes ichthyosis 0019269
T6 95-113 DiseaseOrPhenotypicFeature denotes mental retardation 0001071

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T2 0-24 DiseaseOrPhenotypicFeature denotes Sjögren-Larsson syndrome D016111
T3 26-29 DiseaseOrPhenotypicFeature denotes SLS D016111
T4 37-65 DiseaseOrPhenotypicFeature denotes autosomal recessive disorder DISEASE
T5 83-93 DiseaseOrPhenotypicFeature denotes ichthyosis D007057
T6 95-113 DiseaseOrPhenotypicFeature denotes mental retardation D008607

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 26-29 ChemicalEntity denotes SLS http://purl.obolibrary.org/obo/CHEBI_8984|http://purl.obolibrary.org/obo/CHEBI_144475
T3 164-192 ChemicalEntity denotes fatty aldehyde dehydrogenase C038828
T4 236-250 ChemicalEntity denotes fatty aldehyde C001634|http://purl.obolibrary.org/obo/CHEBI_35746

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T2 0-24 DiseaseOrPhenotypicFeature denotes Sjögren-Larsson syndrome D016111
T3 26-29 DiseaseOrPhenotypicFeature denotes SLS D016111
T4 37-65 DiseaseOrPhenotypicFeature denotes autosomal recessive disorder DISEASE
T5 83-93 DiseaseOrPhenotypicFeature denotes ichthyosis D007057
T6 95-113 DiseaseOrPhenotypicFeature denotes mental retardation D008607

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T4 236-250 ChemicalEntity denotes fatty aldehyde http://purl.obolibrary.org/obo/CHEBI_35746|C001634
T3 164-192 ChemicalEntity denotes fatty aldehyde dehydrogenase C038828
T1 26-29 ChemicalEntity denotes SLS http://purl.obolibrary.org/obo/CHEBI_144475|http://purl.obolibrary.org/obo/CHEBI_8984
T2 164-192 GeneOrGeneProduct denotes fatty aldehyde dehydrogenase
T53498 147-154 GeneOrGeneProduct denotes ALDH3A2
T85215 95-113 DiseaseOrPhenotypicFeature denotes mental retardation D008607
T85524 83-93 DiseaseOrPhenotypicFeature denotes ichthyosis D007057
T36180 37-65 DiseaseOrPhenotypicFeature denotes autosomal recessive disorder DISEASE
T31910 26-29 DiseaseOrPhenotypicFeature denotes SLS D016111
T37692 0-24 DiseaseOrPhenotypicFeature denotes Sjögren-Larsson syndrome D016111

DisGeNET

Id Subject Object Predicate Lexical cue
T0 164-192 gene:224 denotes fatty aldehyde dehydrogenase
T1 0-24 disease:C0037231 denotes Sjögren-Larsson syndrome
R1 T0 T1 associated_with fatty aldehyde dehydrogenase,Sjögren-Larsson syndrome

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 37-56 HP_0000007 denotes autosomal recessive
T2 83-93 HP_0008064 denotes ichthyosis
T3 95-113 HP_0001249 denotes mental retardation
T4 115-125 HP_0001257 denotes spasticity

Allie

Id Subject Object Predicate Lexical cue
SS2_21684788_1_0 26-29 abbr denotes SLS

PubCasesHPO

Id Subject Object Predicate Lexical cue
AB1 83-93 HP:0008064 denotes ichthyosis
AB2 115-125 HP:0001257 denotes spasticity