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PubMed:18366737 / 0-156 JSONTXT

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PMID_GLOBAL

Id Subject Object Predicate Lexical cue mondo_id
T1 4-6 DiseaseOrPhenotypicFeature denotes FH 0016525
T2 93-97 DiseaseOrPhenotypicFeature denotes MCUL 0007888
T3 99-104 DiseaseOrPhenotypicFeature denotes HLRCC 0007888
T4 106-120 DiseaseOrPhenotypicFeature denotes tumor syndrome 0021058
T5 136-155 DiseaseOrPhenotypicFeature denotes fumarase deficiency 0011730

LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-156 Sentence denotes The FH mutation database: an online database of fumarate hydratase mutations involved in the MCUL (HLRCC) tumor syndrome and congenital fumarase deficiency.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
4833 4-6 GeneOrGeneProduct denotes FH NCBIGene:2271
4834 48-66 GeneOrGeneProduct denotes fumarate hydratase NCBIGene:2271
4835 93-97 DiseaseOrPhenotypicFeature denotes MCUL MESH:C535516
4836 99-104 DiseaseOrPhenotypicFeature denotes HLRCC MESH:C535516
4837 106-120 DiseaseOrPhenotypicFeature denotes tumor syndrome MESH:D009369
4838 136-155 DiseaseOrPhenotypicFeature denotes fumarase deficiency MESH:C538191

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 125-135 DiseaseOrPhenotypicFeature denotes congenital 0021140

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 48-66 GeneOrGeneProduct denotes fumarate hydratase
T2 99-104 GeneOrGeneProduct denotes HLRCC
T3 112-120 GeneOrGeneProduct denotes syndrome
T4 136-144 GeneOrGeneProduct denotes fumarase

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 7-15 GeneOrGeneProduct denotes mutation
T2 48-66 GeneOrGeneProduct denotes fumarate hydratase
T3 67-76 GeneOrGeneProduct denotes mutations
T4 93-97 GeneOrGeneProduct denotes MCUL
T5 99-104 GeneOrGeneProduct denotes HLRCC
T6 106-111 GeneOrGeneProduct denotes tumor
T7 112-120 GeneOrGeneProduct denotes syndrome
T8 136-144 GeneOrGeneProduct denotes fumarase

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 106-111 DiseaseOrPhenotypicFeature denotes tumor D009369
T2 112-120 DiseaseOrPhenotypicFeature denotes syndrome D013577
T3 136-155 DiseaseOrPhenotypicFeature denotes fumarase deficiency C538191

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 48-66 GeneOrGeneProduct denotes fumarate hydratase
T2 136-144 GeneOrGeneProduct denotes fumarase

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 4-6 DiseaseOrPhenotypicFeature denotes FH 0016525
T2 93-97 DiseaseOrPhenotypicFeature denotes MCUL 0007888
T3 99-104 DiseaseOrPhenotypicFeature denotes HLRCC 0007888
T4 106-120 DiseaseOrPhenotypicFeature denotes tumor syndrome 0021058
T5 136-155 DiseaseOrPhenotypicFeature denotes fumarase deficiency 0011730

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 93-97 DiseaseOrPhenotypicFeature denotes MCUL DISEASE
T2 99-104 DiseaseOrPhenotypicFeature denotes HLRCC DISEASE
T3 106-111 DiseaseOrPhenotypicFeature denotes tumor D009369
T4 112-120 DiseaseOrPhenotypicFeature denotes syndrome D013577
T5 136-155 DiseaseOrPhenotypicFeature denotes fumarase deficiency C538191

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 93-97 DiseaseOrPhenotypicFeature denotes MCUL DISEASE
T2 99-104 DiseaseOrPhenotypicFeature denotes HLRCC DISEASE
T3 106-111 DiseaseOrPhenotypicFeature denotes tumor D009369
T4 136-155 DiseaseOrPhenotypicFeature denotes fumarase deficiency C538191

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 48-66 ChemicalEntity denotes fumarate hydratase D005649
T2 136-155 ChemicalEntity denotes fumarase deficiency C538191

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T2 136-155 ChemicalEntity denotes fumarase deficiency C538191
T1 48-66 ChemicalEntity denotes fumarate hydratase D005649
T71330 136-144 GeneOrGeneProduct denotes fumarase
T53952 48-66 GeneOrGeneProduct denotes fumarate hydratase
T17349 136-155 DiseaseOrPhenotypicFeature denotes fumarase deficiency C538191
T6572 106-111 DiseaseOrPhenotypicFeature denotes tumor D009369
T48138 99-104 DiseaseOrPhenotypicFeature denotes HLRCC DISEASE
T63073 93-97 DiseaseOrPhenotypicFeature denotes MCUL DISEASE

DisGeNET

Id Subject Object Predicate Lexical cue
T0 48-66 gene:2271 denotes fumarate hydratase
T1 136-155 disease:C0342770 denotes fumarase deficiency
R1 T0 T1 associated_with fumarate hydratase,fumarase deficiency

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
18366737-0#48#66#gene2271 48-66 gene2271 denotes fumarate hydratase
18366737-0#99#104#diseaseC1708350 99-104 diseaseC1708350 denotes HLRCC
18366737-0#136#155#diseaseC0342770 136-155 diseaseC0342770 denotes fumarase deficiency
48#66#gene227199#104#diseaseC1708350 18366737-0#48#66#gene2271 18366737-0#99#104#diseaseC1708350 associated_with fumarate hydratase,HLRCC
48#66#gene2271136#155#diseaseC0342770 18366737-0#48#66#gene2271 18366737-0#136#155#diseaseC0342770 associated_with fumarate hydratase,fumarase deficiency