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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T3 0-192 Sentence denotes Here, we report two maternal cousins with an apparently X-linked phenotype of mental retardation (MR), microphthalmia, choroid coloboma, microcephaly, renal hypoplasia, and spastic paraplegia.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
3456 56-96 DiseaseOrPhenotypicFeature denotes X-linked phenotype of mental retardation MESH:D038901
3457 98-100 DiseaseOrPhenotypicFeature denotes MR MESH:D008607
3458 103-117 DiseaseOrPhenotypicFeature denotes microphthalmia MESH:D008850
3459 119-135 DiseaseOrPhenotypicFeature denotes choroid coloboma MESH:D003103
3460 137-149 DiseaseOrPhenotypicFeature denotes microcephaly MESH:D008831
3461 151-167 DiseaseOrPhenotypicFeature denotes renal hypoplasia MESH:D007674
3462 173-191 DiseaseOrPhenotypicFeature denotes spastic paraplegia MESH:D010264

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T3 103-117 DiseaseOrPhenotypicFeature denotes microphthalmia 0021129
T4 119-126 DiseaseOrPhenotypicFeature denotes choroid 0001280
T5 127-135 DiseaseOrPhenotypicFeature denotes coloboma 0001476
T6 137-149 DiseaseOrPhenotypicFeature denotes microcephaly 0001149
T7 151-167 DiseaseOrPhenotypicFeature denotes renal hypoplasia 0019637
T8 181-191 DiseaseOrPhenotypicFeature denotes paraplegia 0003757

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T15 56-64 GeneOrGeneProduct denotes X-linked
T16 103-117 GeneOrGeneProduct denotes microphthalmia
T17 173-180 GeneOrGeneProduct denotes spastic

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T9 56-64 GeneOrGeneProduct denotes X-linked
T10 103-117 GeneOrGeneProduct denotes microphthalmia
T11 173-180 GeneOrGeneProduct denotes spastic

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T7 78-96 DiseaseOrPhenotypicFeature denotes mental retardation D008607
T8 98-100 DiseaseOrPhenotypicFeature denotes MR D008607
T9 103-117 DiseaseOrPhenotypicFeature denotes microphthalmia D008850
T10 127-135 DiseaseOrPhenotypicFeature denotes coloboma D003103
T11 137-149 DiseaseOrPhenotypicFeature denotes microcephaly D008831
T12 173-191 DiseaseOrPhenotypicFeature denotes spastic paraplegia D010264

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T8 78-96 DiseaseOrPhenotypicFeature denotes mental retardation 0001071
T9 98-100 DiseaseOrPhenotypicFeature denotes MR 0001071
T10 103-117 DiseaseOrPhenotypicFeature denotes microphthalmia 0021129
T11 127-135 DiseaseOrPhenotypicFeature denotes coloboma 0001476
T12 137-149 DiseaseOrPhenotypicFeature denotes microcephaly 0001149
T13 151-167 DiseaseOrPhenotypicFeature denotes renal hypoplasia 0019637
T14 173-191 DiseaseOrPhenotypicFeature denotes spastic paraplegia 0019064

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T9 56-96 DiseaseOrPhenotypicFeature denotes X-linked phenotype of mental retardation DISEASE
T10 98-100 DiseaseOrPhenotypicFeature denotes MR D008607
T11 103-117 DiseaseOrPhenotypicFeature denotes microphthalmia D008850
T12 127-135 DiseaseOrPhenotypicFeature denotes coloboma D003103
T13 137-149 DiseaseOrPhenotypicFeature denotes microcephaly D008831
T14 151-167 DiseaseOrPhenotypicFeature denotes renal hypoplasia DISEASE
T15 173-191 DiseaseOrPhenotypicFeature denotes spastic paraplegia D010264

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T9 56-96 DiseaseOrPhenotypicFeature denotes X-linked phenotype of mental retardation DISEASE
T10 98-100 DiseaseOrPhenotypicFeature denotes MR D008607
T11 103-117 DiseaseOrPhenotypicFeature denotes microphthalmia D008850
T12 127-135 DiseaseOrPhenotypicFeature denotes coloboma D003103
T13 137-149 DiseaseOrPhenotypicFeature denotes microcephaly D008831
T14 151-167 DiseaseOrPhenotypicFeature denotes renal hypoplasia DISEASE
T15 173-191 DiseaseOrPhenotypicFeature denotes spastic paraplegia D010264

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label
T15 173-191 DiseaseOrPhenotypicFeature denotes spastic paraplegia D010264
T14 151-167 DiseaseOrPhenotypicFeature denotes renal hypoplasia DISEASE
T13 137-149 DiseaseOrPhenotypicFeature denotes microcephaly D008831
T12 127-135 DiseaseOrPhenotypicFeature denotes coloboma D003103
T11 103-117 DiseaseOrPhenotypicFeature denotes microphthalmia D008850
T10 98-100 DiseaseOrPhenotypicFeature denotes MR D008607
T96765 56-96 DiseaseOrPhenotypicFeature denotes X-linked phenotype of mental retardation DISEASE

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T3 0-192 Sentence denotes Here, we report two maternal cousins with an apparently X-linked phenotype of mental retardation (MR), microphthalmia, choroid coloboma, microcephaly, renal hypoplasia, and spastic paraplegia.
T3 0-192 Sentence denotes Here, we report two maternal cousins with an apparently X-linked phenotype of mental retardation (MR), microphthalmia, choroid coloboma, microcephaly, renal hypoplasia, and spastic paraplegia.

PubmedHPO

Id Subject Object Predicate Lexical cue
T3 56-64 HP_0001417 denotes X-linked
T4 78-96 HP_0001249 denotes mental retardation
T5 103-117 HP_0000568 denotes microphthalmia
T6 119-135 HP_0000611 denotes choroid coloboma
T7 127-135 HP_0000589 denotes coloboma
T8 137-149 HP_0000252 denotes microcephaly
T9 151-167 HP_0000089 denotes renal hypoplasia
T10 173-180 HP_0001257 denotes spastic
T11 173-191 HP_0001258 denotes spastic paraplegia
T12 181-191 HP_0010550 denotes paraplegia

PubCasesHPO

Id Subject Object Predicate Lexical cue
AB1 103-117 HP:0000568 denotes microphthalmia
AB2 127-135 HP:0000589 denotes coloboma
AB3 137-149 HP:0000252 denotes microcephaly
AB4 151-167 HP:0000089 denotes renal hypoplasia
AB5 173-191 HP:0001258 denotes spastic paraplegia

PubCasesORDO

Id Subject Object Predicate Lexical cue
AB1 151-167 ORDO:93101 denotes renal hypoplasia