PubMed:11133985 / 0-257 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/11133985","sourcedb":"PubMed","sourceid":"11133985","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/11133985","text":"A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.\nThe GCN4 motif, a cis-element that is highly conserved in the promoters of cereal seed storage protein genes, pla","tracks":[{"project":"Oryza-OGER","denotations":[{"id":"T1","span":{"begin":2,"end":6},"obj":"http://id.nlm.nih.gov/mesh/D012275"},{"id":"T2","span":{"begin":2,"end":6},"obj":"http://purl.bioontology.org/ontology/RXNORM/1311040"},{"id":"T3","span":{"begin":2,"end":6},"obj":"http://www.ncbi.nlm.nih.gov/taxonomy/4530"},{"id":"T4","span":{"begin":65,"end":68},"obj":"http://purl.obolibrary.org/obo/PR_Q9NZC7"},{"id":"T5","span":{"begin":65,"end":68},"obj":"http://purl.obolibrary.org/obo/PR_000001036"},{"id":"T6","span":{"begin":102,"end":109},"obj":"http://purl.obolibrary.org/obo/GO_0051235"},{"id":"T7","span":{"begin":102,"end":117},"obj":"http://purl.obolibrary.org/obo/GO_0045735"},{"id":"T8","span":{"begin":102,"end":117},"obj":"http://purl.obolibrary.org/obo/GO_0005187"},{"id":"T9","span":{"begin":110,"end":117},"obj":"http://purl.obolibrary.org/obo/CHEBI_11122"},{"id":"T10","span":{"begin":110,"end":117},"obj":"http://purl.obolibrary.org/obo/SO_0000104"},{"id":"T11","span":{"begin":110,"end":117},"obj":"http://purl.obolibrary.org/obo/PR_000000001"},{"id":"T12","span":{"begin":110,"end":117},"obj":"http://purl.obolibrary.org/obo/CHEBI_16541"},{"id":"T13","span":{"begin":110,"end":117},"obj":"http://purl.obolibrary.org/obo/GO_0003675"},{"id":"T14","span":{"begin":110,"end":117},"obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"T15","span":{"begin":132,"end":136},"obj":"http://purl.obolibrary.org/obo/PR_Q9M1H3"},{"id":"T16","span":{"begin":132,"end":136},"obj":"http://purl.obolibrary.org/obo/PR_P03069"},{"id":"T17","span":{"begin":137,"end":142},"obj":"http://purl.obolibrary.org/obo/SO_0100017"},{"id":"T18","span":{"begin":137,"end":142},"obj":"http://purl.obolibrary.org/obo/SO_0001067"},{"id":"T19","span":{"begin":148,"end":152},"obj":"http://purl.obolibrary.org/obo/PR_Q9M1H3"},{"id":"T20","span":{"begin":148,"end":152},"obj":"http://purl.obolibrary.org/obo/PR_P03069"},{"id":"T21","span":{"begin":153,"end":158},"obj":"http://purl.obolibrary.org/obo/SO_0100017"},{"id":"T22","span":{"begin":153,"end":158},"obj":"http://purl.obolibrary.org/obo/SO_0001067"},{"id":"T23","span":{"begin":162,"end":165},"obj":"http://purl.obolibrary.org/obo/PR_Q9PW70"},{"id":"T24","span":{"begin":162,"end":165},"obj":"http://purl.obolibrary.org/obo/PR_000005503"},{"id":"T25","span":{"begin":162,"end":165},"obj":"http://www.uniprot.org/uniprot/Q9NSE2"},{"id":"T26","span":{"begin":162,"end":165},"obj":"http://purl.obolibrary.org/obo/PR_Q62225"},{"id":"T27","span":{"begin":162,"end":165},"obj":"http://www.uniprot.org/uniprot/Q62225"},{"id":"T28","span":{"begin":162,"end":165},"obj":"http://purl.obolibrary.org/obo/UBERON_0035925"},{"id":"T29","span":{"begin":162,"end":165},"obj":"http://www.uniprot.org/uniprot/O70512"},{"id":"T30","span":{"begin":162,"end":165},"obj":"http://www.uniprot.org/uniprot/Q2HJ53"},{"id":"T31","span":{"begin":162,"end":165},"obj":"http://www.uniprot.org/uniprot/Q9PW70"},{"id":"T32","span":{"begin":166,"end":173},"obj":"http://purl.obolibrary.org/obo/UBERON_0000062"},{"id":"T33","span":{"begin":166,"end":173},"obj":"http://purl.obolibrary.org/obo/CHEBI_33250"},{"id":"T34","span":{"begin":189,"end":198},"obj":"http://purl.obolibrary.org/obo/SO_0000856"},{"id":"T35","span":{"begin":219,"end":225},"obj":"http://id.nlm.nih.gov/mesh/D002523"},{"id":"T36","span":{"begin":231,"end":238},"obj":"http://purl.obolibrary.org/obo/GO_0051235"},{"id":"T37","span":{"begin":231,"end":246},"obj":"http://purl.obolibrary.org/obo/GO_0045735"},{"id":"T38","span":{"begin":231,"end":246},"obj":"http://purl.obolibrary.org/obo/GO_0005187"},{"id":"T39","span":{"begin":239,"end":246},"obj":"http://purl.obolibrary.org/obo/CHEBI_11122"},{"id":"T40","span":{"begin":239,"end":246},"obj":"http://purl.obolibrary.org/obo/SO_0000104"},{"id":"T41","span":{"begin":239,"end":246},"obj":"http://purl.obolibrary.org/obo/PR_000000001"},{"id":"T42","span":{"begin":239,"end":246},"obj":"http://purl.obolibrary.org/obo/CHEBI_16541"},{"id":"T43","span":{"begin":239,"end":246},"obj":"http://purl.obolibrary.org/obo/GO_0003675"},{"id":"T44","span":{"begin":239,"end":246},"obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"attributes":[{"subj":"T1","pred":"source","obj":"Oryza-OGER"},{"subj":"T2","pred":"source","obj":"Oryza-OGER"},{"subj":"T3","pred":"source","obj":"Oryza-OGER"},{"subj":"T4","pred":"source","obj":"Oryza-OGER"},{"subj":"T5","pred":"source","obj":"Oryza-OGER"},{"subj":"T6","pred":"source","obj":"Oryza-OGER"},{"subj":"T7","pred":"source","obj":"Oryza-OGER"},{"subj":"T8","pred":"source","obj":"Oryza-OGER"},{"subj":"T9","pred":"source","obj":"Oryza-OGER"},{"subj":"T10","pred":"source","obj":"Oryza-OGER"},{"subj":"T11","pred":"source","obj":"Oryza-OGER"},{"subj":"T12","pred":"source","obj":"Oryza-OGER"},{"subj":"T13","pred":"source","obj":"Oryza-OGER"},{"subj":"T14","pred":"source","obj":"Oryza-OGER"},{"subj":"T15","pred":"source","obj":"Oryza-OGER"},{"subj":"T16","pred":"source","obj":"Oryza-OGER"},{"subj":"T17","pred":"source","obj":"Oryza-OGER"},{"subj":"T18","pred":"source","obj":"Oryza-OGER"},{"subj":"T19","pred":"source","obj":"Oryza-OGER"},{"subj":"T20","pred":"source","obj":"Oryza-OGER"},{"subj":"T21","pred":"source","obj":"Oryza-OGER"},{"subj":"T22","pred":"source","obj":"Oryza-OGER"},{"subj":"T23","pred":"source","obj":"Oryza-OGER"},{"subj":"T24","pred":"source","obj":"Oryza-OGER"},{"subj":"T25","pred":"source","obj":"Oryza-OGER"},{"subj":"T26","pred":"source","obj":"Oryza-OGER"},{"subj":"T27","pred":"source","obj":"Oryza-OGER"},{"subj":"T28","pred":"source","obj":"Oryza-OGER"},{"subj":"T29","pred":"source","obj":"Oryza-OGER"},{"subj":"T30","pred":"source","obj":"Oryza-OGER"},{"subj":"T31","pred":"source","obj":"Oryza-OGER"},{"subj":"T32","pred":"source","obj":"Oryza-OGER"},{"subj":"T33","pred":"source","obj":"Oryza-OGER"},{"subj":"T34","pred":"source","obj":"Oryza-OGER"},{"subj":"T35","pred":"source","obj":"Oryza-OGER"},{"subj":"T36","pred":"source","obj":"Oryza-OGER"},{"subj":"T37","pred":"source","obj":"Oryza-OGER"},{"subj":"T38","pred":"source","obj":"Oryza-OGER"},{"subj":"T39","pred":"source","obj":"Oryza-OGER"},{"subj":"T40","pred":"source","obj":"Oryza-OGER"},{"subj":"T41","pred":"source","obj":"Oryza-OGER"},{"subj":"T42","pred":"source","obj":"Oryza-OGER"},{"subj":"T43","pred":"source","obj":"Oryza-OGER"},{"subj":"T44","pred":"source","obj":"Oryza-OGER"}]},{"project":"pqqtest_sentence","denotations":[{"id":"M_21","span":{"begin":148,"end":158},"obj":"GeneID:NA"},{"id":"T1530","span":{"begin":18,"end":43},"obj":"funRiceGene:470, xzyao:11182"},{"id":"T54897","span":{"begin":102,"end":117},"obj":"xzyao:25000"},{"id":"T47020","span":{"begin":231,"end":246},"obj":"xzyao:25000"},{"id":"T70278","span":{"begin":226,"end":230},"obj":"PO:0009010, funRiceGene:180"},{"id":"T29328","span":{"begin":226,"end":246},"obj":"xzyao:36345"},{"id":"T94863","span":{"begin":69,"end":98},"obj":"xzyao:11965"},{"id":"T81475","span":{"begin":69,"end":78},"obj":"PO:0009089, funRiceGene:253"},{"id":"M_28","span":{"begin":132,"end":136},"obj":"hunflair:NA:Gene"},{"id":"M_29","span":{"begin":148,"end":152},"obj":"hunflair:NA:Gene"},{"id":"M_37","span":{"begin":45,"end":51},"obj":"hunflair:NA:Gene"},{"id":"M_44","span":{"begin":132,"end":142},"obj":"hunflair:NA:Gene"},{"id":"M_45","span":{"begin":148,"end":158},"obj":"hunflair:NA:Gene"},{"id":"M_51","span":{"begin":2,"end":6},"obj":"hunflair:NA:Species"},{"id":"M_61","span":{"begin":2,"end":6},"obj":"pubtator:4530:Species"}],"attributes":[{"subj":"M_21","pred":"source","obj":"pqqtest_sentence"},{"subj":"T1530","pred":"source","obj":"pqqtest_sentence"},{"subj":"T54897","pred":"source","obj":"pqqtest_sentence"},{"subj":"T47020","pred":"source","obj":"pqqtest_sentence"},{"subj":"T70278","pred":"source","obj":"pqqtest_sentence"},{"subj":"T29328","pred":"source","obj":"pqqtest_sentence"},{"subj":"T94863","pred":"source","obj":"pqqtest_sentence"},{"subj":"T81475","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_28","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_29","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_37","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_44","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_45","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_51","pred":"source","obj":"pqqtest_sentence"},{"subj":"M_61","pred":"source","obj":"pqqtest_sentence"}]},{"project":"21k_plant_trait_mention","denotations":[{"id":"M_3","span":{"begin":226,"end":230},"obj":"PO:0009010, funRiceGene:180"},{"id":"M_7","span":{"begin":132,"end":142},"obj":"hunflair:NA:Gene"},{"id":"M_8","span":{"begin":148,"end":158},"obj":"hunflair:NA:Gene"},{"id":"M_11","span":{"begin":45,"end":51},"obj":"hunflair:NA:Gene"},{"id":"M_19","span":{"begin":2,"end":6},"obj":"hunflair:NA:Species"},{"id":"M_30","span":{"begin":132,"end":136},"obj":"hunflair:NA:Gene"},{"id":"M_31","span":{"begin":148,"end":152},"obj":"hunflair:NA:Gene"},{"id":"M_43","span":{"begin":2,"end":6},"obj":"pubtator:4530:Species"}],"attributes":[{"subj":"M_3","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_7","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_8","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_11","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_19","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_30","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_31","pred":"source","obj":"21k_plant_trait_mention"},{"subj":"M_43","pred":"source","obj":"21k_plant_trait_mention"}]},{"project":"OryzaGP_2021","denotations":[{"id":"T1","span":{"begin":45,"end":51},"obj":"http://identifiers.org/oryzabase.gene/7467"},{"id":"T62822","span":{"begin":45,"end":51},"obj":"http://identifiers.org/ricegap/LOC_Os07g08420"},{"id":"T56900","span":{"begin":45,"end":51},"obj":"http://identifiers.org/rapdb.locus/Os07g0182000"},{"id":"T91369","span":{"begin":45,"end":51},"obj":"http://identifiers.org/uniprot/Q9AR01"},{"id":"M_4","span":{"begin":132,"end":142},"obj":"hunflair:NA:Gene"},{"id":"M_5","span":{"begin":148,"end":158},"obj":"hunflair:NA:Gene"},{"id":"M_10","span":{"begin":2,"end":6},"obj":"hunflair:NA:Species"},{"id":"M_13","span":{"begin":45,"end":51},"obj":"hunflair:NA:Gene"},{"id":"M_21","span":{"begin":132,"end":136},"obj":"hunflair:NA:Gene"},{"id":"M_22","span":{"begin":148,"end":152},"obj":"hunflair:NA:Gene"}],"attributes":[{"subj":"T1","pred":"source","obj":"OryzaGP_2021"},{"subj":"T62822","pred":"source","obj":"OryzaGP_2021"},{"subj":"T56900","pred":"source","obj":"OryzaGP_2021"},{"subj":"T91369","pred":"source","obj":"OryzaGP_2021"},{"subj":"M_4","pred":"source","obj":"OryzaGP_2021"},{"subj":"M_5","pred":"source","obj":"OryzaGP_2021"},{"subj":"M_10","pred":"source","obj":"OryzaGP_2021"},{"subj":"M_13","pred":"source","obj":"OryzaGP_2021"},{"subj":"M_21","pred":"source","obj":"OryzaGP_2021"},{"subj":"M_22","pred":"source","obj":"OryzaGP_2021"}]},{"project":"sentences","denotations":[{"id":"T1","span":{"begin":0,"end":143},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T1","pred":"source","obj":"sentences"}]},{"project":"Glycosmos6-MAT","denotations":[{"id":"T1","span":{"begin":69,"end":78},"obj":"http://purl.obolibrary.org/obo/MAT_0000227"}],"attributes":[{"subj":"T1","pred":"source","obj":"Glycosmos6-MAT"}]},{"project":"OryzaGP_2021_v2","denotations":[{"id":"T1","span":{"begin":45,"end":51},"obj":"http://identifiers.org/oryzabase.gene/7467"},{"id":"T38808","span":{"begin":45,"end":51},"obj":"http://identifiers.org/rapdb.locus/Os07g0182000"}],"attributes":[{"subj":"T1","pred":"source","obj":"OryzaGP_2021_v2"},{"subj":"T38808","pred":"source","obj":"OryzaGP_2021_v2"}]},{"project":"OryzaGP_2021_FLAIR","denotations":[{"id":"M_4","span":{"begin":132,"end":142},"obj":"hunflair:NA:Gene"},{"id":"M_5","span":{"begin":148,"end":158},"obj":"hunflair:NA:Gene"},{"id":"M_10","span":{"begin":2,"end":6},"obj":"hunflair:NA:Species"},{"id":"M_13","span":{"begin":45,"end":51},"obj":"hunflair:NA:Gene"},{"id":"M_21","span":{"begin":132,"end":136},"obj":"hunflair:NA:Gene"},{"id":"M_22","span":{"begin":148,"end":152},"obj":"hunflair:NA:Gene"}],"attributes":[{"subj":"M_4","pred":"source","obj":"OryzaGP_2021_FLAIR"},{"subj":"M_5","pred":"source","obj":"OryzaGP_2021_FLAIR"},{"subj":"M_10","pred":"source","obj":"OryzaGP_2021_FLAIR"},{"subj":"M_13","pred":"source","obj":"OryzaGP_2021_FLAIR"},{"subj":"M_21","pred":"source","obj":"OryzaGP_2021_FLAIR"},{"subj":"M_22","pred":"source","obj":"OryzaGP_2021_FLAIR"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":2,"end":6},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"4530"},{"subj":"T1","pred":"source","obj":"NCBITAXON"}]},{"project":"Anatomy-MAT","denotations":[{"id":"T1","span":{"begin":69,"end":78},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"mat_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/MAT_0000227"},{"subj":"T1","pred":"source","obj":"Anatomy-MAT"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"Oryza-OGER","color":"#93d2ec","default":true},{"id":"pqqtest_sentence","color":"#eceb93"},{"id":"21k_plant_trait_mention","color":"#d193ec"},{"id":"OryzaGP_2021","color":"#93ecb7"},{"id":"sentences","color":"#ec9d93"},{"id":"Glycosmos6-MAT","color":"#93a2ec"},{"id":"OryzaGP_2021_v2","color":"#bcec93"},{"id":"OryzaGP_2021_FLAIR","color":"#ec93d6"},{"id":"NCBITAXON","color":"#93ece8"},{"id":"Anatomy-MAT","color":"#ecce93"}]}]}}