PMC:7600245 / 54155-55109
Annnotations
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T237 | 92-103 | Body_part | denotes | microtubule | http://purl.org/sig/ont/fma/fma63849 |
T238 | 170-177 | Body_part | denotes | tubulin | http://purl.org/sig/ont/fma/fma67116 |
T239 | 261-273 | Body_part | denotes | microtubules | http://purl.org/sig/ont/fma/fma63849 |
T240 | 393-405 | Body_part | denotes | microtubules | http://purl.org/sig/ont/fma/fma63849 |
T241 | 457-468 | Body_part | denotes | Microtubule | http://purl.org/sig/ont/fma/fma63849 |
T242 | 577-585 | Body_part | denotes | cytokine | http://purl.org/sig/ont/fma/fma84050 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T234 | 231-237 | Disease | denotes | cancer | http://purl.obolibrary.org/obo/MONDO_0004992 |
T235 | 375-379 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T236 | 446-455 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T237 | 603-611 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T238 | 614-623 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
T239 | 740-748 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T240 | 783-818 | Disease | denotes | acute respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0006502 |
T241 | 789-818 | Disease | denotes | respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0009971 |
T242 | 930-938 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T546 | 191-194 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
T547 | 295-303 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
T548 | 356-363 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
T549 | 429-436 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | viruses |
T550 | 672-673 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T551 | 902-905 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T25991 | 58-64 | Chemical | denotes | indole | http://purl.obolibrary.org/obo/CHEBI_16881|http://purl.obolibrary.org/obo/CHEBI_35581 |
T52649 | 143-153 | Chemical | denotes | colchicine | http://purl.obolibrary.org/obo/CHEBI_23359 |
T63794 | 285-294 | Chemical | denotes | antiviral | http://purl.obolibrary.org/obo/CHEBI_22587 |
T63616 | 635-639 | Chemical | denotes | drug | http://purl.obolibrary.org/obo/CHEBI_23888 |
T46440 | 884-894 | Chemical | denotes | colchicine | http://purl.obolibrary.org/obo/CHEBI_23359 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T87 | 92-120 | http://purl.obolibrary.org/obo/GO_0007019 | denotes | microtubule depolymerization |
T88 | 329-363 | http://purl.obolibrary.org/obo/GO_0075733 | denotes | intracellular transport of viruses |
T89 | 329-352 | http://purl.obolibrary.org/obo/GO_0046907 | denotes | intracellular transport |
T90 | 343-352 | http://purl.obolibrary.org/obo/GO_0006810 | denotes | transport |
T91 | 457-485 | http://purl.obolibrary.org/obo/GO_0007019 | denotes | Microtubule depolymerization |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T54 | 231-237 | Phenotype | denotes | cancer | http://purl.obolibrary.org/obo/HP_0002664 |
T55 | 577-591 | Phenotype | denotes | cytokine storm | http://purl.obolibrary.org/obo/HP_0033041 |
T56 | 789-809 | Phenotype | denotes | respiratory distress | http://purl.obolibrary.org/obo/HP_0002098 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T401 | 0-4 | Sentence | denotes | 4.6. |
T402 | 5-13 | Sentence | denotes | VERU-111 |
T403 | 14-187 | Sentence | denotes | It is an orally bioavailable, 3-substituted indole derivative (Figure 8A) and microtubule depolymerization agent that recognizes colchicine-binding site on tubulin subunits. |
T404 | 188-244 | Sentence | denotes | It has been under clinical development for cancer [170]. |
T405 | 245-456 | Sentence | denotes | Drugs targeting microtubules have broad antiviral activity because they disrupt the intracellular transport of viruses, including SARS CoV-2, along microtubules, which is critical for viruses to cause infection. |
T406 | 457-630 | Sentence | denotes | Microtubule depolymerization agents also have strong anti-inflammatory effects that can be beneficial in mitigating the cytokine storm induced by SARS-CoV-2 infection [171]. |
T407 | 631-841 | Sentence | denotes | The drug is currently being evaluated in a phase 2 randomized, placebo-controlled study for the treatment of SARS-CoV-2 in patients at elevated risk of acute respiratory distress syndrome (NCT04388826; n = 40). |
T408 | 842-954 | Sentence | denotes | Of note, it is mechanistically similar to colchicine, which has also been considered in COVID-19 patients [172]. |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
1686 | 375-385 | Species | denotes | SARS CoV-2 | Tax:2697049 |
1687 | 740-750 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
1688 | 754-762 | Species | denotes | patients | Tax:9606 |
1689 | 939-947 | Species | denotes | patients | Tax:9606 |
1690 | 45-64 | Chemical | denotes | -substituted indole | |
1691 | 143-153 | Chemical | denotes | colchicine | MESH:D003078 |
1692 | 884-894 | Chemical | denotes | colchicine | MESH:D003078 |
1693 | 231-237 | Disease | denotes | cancer | MESH:D009369 |
1694 | 446-455 | Disease | denotes | infection | MESH:D007239 |
1695 | 603-623 | Disease | denotes | SARS-CoV-2 infection | MESH:C000657245 |
1696 | 783-818 | Disease | denotes | acute respiratory distress syndrome | MESH:D012128 |
1697 | 930-938 | Disease | denotes | COVID-19 | MESH:C000657245 |