PMC:7574920 / 34902-35530
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T137 | 143-146 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
| T138 | 401-409 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
| T139 | 530-533 | Body_part | denotes | RNA | http://purl.org/sig/ont/fma/fma67095 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T303 | 258-260 | http://purl.obolibrary.org/obo/CLO_0001000 | denotes | 35 |
| T304 | 427-429 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T69 | 401-409 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T70 | 458-464 | Chemical | denotes | silica | http://purl.obolibrary.org/obo/CHEBI_30563 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 249 | 458-464 | Chemical | denotes | silica | MESH:D012822 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T210 | 56-58 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
| T211 | 114-116 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
| T212 | 363-373 | http://purl.obolibrary.org/obo/GO_0004175 | denotes | proteinase |
| T213 | 545-547 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
| T214 | 605-607 | http://purl.obolibrary.org/obo/GO_0001171 | denotes | RT |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T264 | 0-147 | Sentence | denotes | Although faster and more convenient, the direct swab–to–RT-LAMP assay was less sensitive and less robust than the RT-LAMP assay using isolated RNA. |
| T265 | 148-410 | Sentence | denotes | To increase robustness, various treatments of crude swab samples have been described previously [reviewed in (35)], many of which require additional processing of the samples, for example, by pipetting or by adding proteinase K to degrade contaminating proteins. |
| T266 | 411-628 | Sentence | denotes | Rabe and Cepko (22) have suggested using cheap silica preparations and new sample inactivation protocols to enrich the RNA before the RT-LAMP assay, but this would complicate the simple swab–to–RT-LAMP assay workflow. |