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    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T609","span":{"begin":551,"end":552},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T610","span":{"begin":700,"end":701},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T611","span":{"begin":720,"end":722},"obj":"http://purl.obolibrary.org/obo/CLO_0001382"},{"id":"T612","span":{"begin":1133,"end":1135},"obj":"http://purl.obolibrary.org/obo/CLO_0007874"},{"id":"T613","span":{"begin":1141,"end":1143},"obj":"http://purl.obolibrary.org/obo/CLO_0053755"},{"id":"T614","span":{"begin":1171,"end":1176},"obj":"http://purl.obolibrary.org/obo/CLO_0007706"}],"text":"N-((1S)-1-{[((1S)-3-(Benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)amino]carbonyl}-3-methylbutyl)-4-methoxy-N-methyl-1H-indole-2-carboxamide\nFollowing the procedure described for the preparation of N-[(1S)-2-[((1S)-3-(benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)amino]-1-(cyclohexylmethyl)-2-oxoethyl]-4-methoxy-1H-indole-2-carboxamide but substituting N1-((1S)-3-(benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)-N2-(tert-butoxycarbonyl)-N2-methyl-l-leucinamide and making noncritical variations provided a crude brown oil. This material was purified by Biotage flash chromatography, eluting with methanol/dichloromethane to afford the title compound as a clear oil, 67 mg, 48%. 1H NMR (400 MHz, CDCl3) δ 9.83 (s, 1H), 7.95 (s, 1H), 7.26–7.36 (m, 5H), 7.18 (t, J = 8.0 Hz, 1H), 7.04 (d, J = 8.3 Hz, 1H), 7.00 (s, 1H), 6.48 (d, J = 7.8 Hz, 1H), 5.87 (s, 1H), 5.18–5.27 (m, 1H), 4.70 (s, 1H), 4.50–4.63 (m, 2H), 4.16–4.36 (m, 2H), 3.93 (s, 3H), 3.32 (s, 3H), 3.03–3.18 (m, 2H), 2.22 (s, 2H), 1.91–2.02 (m, 1H), 1.81 (t, J = 7.3 Hz, 3H), 1.66–1.72 (m, 1H), 1.55 (s, 1H), 0.87–1.01 (m, 6H); MS (API-ES−) for C32H40N4O6m/z 576.7 (M – H)−."}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T1402","span":{"begin":34,"end":37},"obj":"Chemical"},{"id":"T1403","span":{"begin":68,"end":74},"obj":"Chemical"},{"id":"T1405","span":{"begin":75,"end":81},"obj":"Chemical"},{"id":"T1406","span":{"begin":82,"end":87},"obj":"Chemical"},{"id":"T1407","span":{"begin":88,"end":96},"obj":"Chemical"},{"id":"T1408","span":{"begin":98,"end":111},"obj":"Chemical"},{"id":"T1409","span":{"begin":115,"end":122},"obj":"Chemical"},{"id":"T1411","span":{"begin":125,"end":131},"obj":"Chemical"},{"id":"T1413","span":{"begin":132,"end":141},"obj":"Chemical"},{"id":"T1414","span":{"begin":132,"end":134},"obj":"Chemical"},{"id":"T1415","span":{"begin":135,"end":141},"obj":"Chemical"},{"id":"T1416","span":{"begin":144,"end":155},"obj":"Chemical"},{"id":"T1418","span":{"begin":246,"end":249},"obj":"Chemical"},{"id":"T1419","span":{"begin":280,"end":286},"obj":"Chemical"},{"id":"T1421","span":{"begin":287,"end":293},"obj":"Chemical"},{"id":"T1422","span":{"begin":294,"end":299},"obj":"Chemical"},{"id":"T1423","span":{"begin":322,"end":332},"obj":"Chemical"},{"id":"T1424","span":{"begin":336,"end":343},"obj":"Chemical"},{"id":"T1426","span":{"begin":344,"end":353},"obj":"Chemical"},{"id":"T1427","span":{"begin":344,"end":346},"obj":"Chemical"},{"id":"T1428","span":{"begin":347,"end":353},"obj":"Chemical"},{"id":"T1429","span":{"begin":356,"end":367},"obj":"Chemical"},{"id":"T1431","span":{"begin":410,"end":413},"obj":"Chemical"},{"id":"T1432","span":{"begin":444,"end":450},"obj":"Chemical"},{"id":"T1434","span":{"begin":451,"end":457},"obj":"Chemical"},{"id":"T1435","span":{"begin":459,"end":461},"obj":"Chemical"},{"id":"T1436","span":{"begin":463,"end":482},"obj":"Chemical"},{"id":"T1437","span":{"begin":484,"end":486},"obj":"Chemical"},{"id":"T1438","span":{"begin":487,"end":493},"obj":"Chemical"},{"id":"T1440","span":{"begin":643,"end":651},"obj":"Chemical"},{"id":"T1441","span":{"begin":652,"end":667},"obj":"Chemical"},{"id":"T1442","span":{"begin":725,"end":727},"obj":"Chemical"},{"id":"T1443","span":{"begin":742,"end":747},"obj":"Chemical"},{"id":"T1444","span":{"begin":760,"end":762},"obj":"Chemical"},{"id":"T1445","span":{"begin":774,"end":776},"obj":"Chemical"},{"id":"T1446","span":{"begin":819,"end":821},"obj":"Chemical"},{"id":"T1447","span":{"begin":845,"end":847},"obj":"Chemical"},{"id":"T1824","span":{"begin":859,"end":861},"obj":"Chemical"},{"id":"T1449","span":{"begin":885,"end":887},"obj":"Chemical"},{"id":"T1450","span":{"begin":899,"end":901},"obj":"Chemical"},{"id":"T1451","span":{"begin":918,"end":920},"obj":"Chemical"},{"id":"T1452","span":{"begin":932,"end":934},"obj":"Chemical"},{"id":"T1453","span":{"begin":1050,"end":1052},"obj":"Chemical"},{"id":"T1454","span":{"begin":1095,"end":1097},"obj":"Chemical"},{"id":"T1455","span":{"begin":1109,"end":1111},"obj":"Chemical"},{"id":"T1456","span":{"begin":1133,"end":1135},"obj":"Chemical"},{"id":"T1457","span":{"begin":1141,"end":1143},"obj":"Chemical"}],"attributes":[{"id":"A1402","pred":"chebi_id","subj":"T1402","obj":"http://purl.obolibrary.org/obo/CHEBI_46629"},{"id":"A1403","pred":"chebi_id","subj":"T1403","obj":"http://purl.obolibrary.org/obo/CHEBI_32875"},{"id":"A1404","pred":"chebi_id","subj":"T1403","obj":"http://purl.obolibrary.org/obo/CHEBI_29309"},{"id":"A1405","pred":"chebi_id","subj":"T1405","obj":"http://purl.obolibrary.org/obo/CHEBI_26308"},{"id":"A1406","pred":"chebi_id","subj":"T1406","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"id":"A1407","pred":"chebi_id","subj":"T1407","obj":"http://purl.obolibrary.org/obo/CHEBI_23019"},{"id":"A1408","pred":"chebi_id","subj":"T1408","obj":"http://purl.obolibrary.org/obo/CHEBI_30359"},{"id":"A1409","pred":"chebi_id","subj":"T1409","obj":"http://purl.obolibrary.org/obo/CHEBI_32772"},{"id":"A1410","pred":"chebi_id","subj":"T1409","obj":"http://purl.obolibrary.org/obo/CHEBI_44520"},{"id":"A1411","pred":"chebi_id","subj":"T1411","obj":"http://purl.obolibrary.org/obo/CHEBI_32875"},{"id":"A1412","pred":"chebi_id","subj":"T1411","obj":"http://purl.obolibrary.org/obo/CHEBI_29309"},{"id":"A1413","pred":"chebi_id","subj":"T1413","obj":"http://purl.obolibrary.org/obo/CHEBI_16881"},{"id":"A1414","pred":"chebi_id","subj":"T1414","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1415","pred":"chebi_id","subj":"T1415","obj":"http://purl.obolibrary.org/obo/CHEBI_35581"},{"id":"A1416","pred":"chebi_id","subj":"T1416","obj":"http://purl.obolibrary.org/obo/CHEBI_23004"},{"id":"A1417","pred":"chebi_id","subj":"T1416","obj":"http://purl.obolibrary.org/obo/CHEBI_37622"},{"id":"A1418","pred":"chebi_id","subj":"T1418","obj":"http://purl.obolibrary.org/obo/CHEBI_46629"},{"id":"A1419","pred":"chebi_id","subj":"T1419","obj":"http://purl.obolibrary.org/obo/CHEBI_32875"},{"id":"A1420","pred":"chebi_id","subj":"T1419","obj":"http://purl.obolibrary.org/obo/CHEBI_29309"},{"id":"A1421","pred":"chebi_id","subj":"T1421","obj":"http://purl.obolibrary.org/obo/CHEBI_26308"},{"id":"A1422","pred":"chebi_id","subj":"T1422","obj":"http://purl.obolibrary.org/obo/CHEBI_46882"},{"id":"A1423","pred":"chebi_id","subj":"T1423","obj":"http://purl.obolibrary.org/obo/CHEBI_46886"},{"id":"A1424","pred":"chebi_id","subj":"T1424","obj":"http://purl.obolibrary.org/obo/CHEBI_32772"},{"id":"A1425","pred":"chebi_id","subj":"T1424","obj":"http://purl.obolibrary.org/obo/CHEBI_44520"},{"id":"A1426","pred":"chebi_id","subj":"T1426","obj":"http://purl.obolibrary.org/obo/CHEBI_16881"},{"id":"A1427","pred":"chebi_id","subj":"T1427","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1428","pred":"chebi_id","subj":"T1428","obj":"http://purl.obolibrary.org/obo/CHEBI_35581"},{"id":"A1429","pred":"chebi_id","subj":"T1429","obj":"http://purl.obolibrary.org/obo/CHEBI_23004"},{"id":"A1430","pred":"chebi_id","subj":"T1429","obj":"http://purl.obolibrary.org/obo/CHEBI_37622"},{"id":"A1431","pred":"chebi_id","subj":"T1431","obj":"http://purl.obolibrary.org/obo/CHEBI_46629"},{"id":"A1432","pred":"chebi_id","subj":"T1432","obj":"http://purl.obolibrary.org/obo/CHEBI_32875"},{"id":"A1433","pred":"chebi_id","subj":"T1432","obj":"http://purl.obolibrary.org/obo/CHEBI_29309"},{"id":"A1434","pred":"chebi_id","subj":"T1434","obj":"http://purl.obolibrary.org/obo/CHEBI_26308"},{"id":"A1435","pred":"chebi_id","subj":"T1435","obj":"http://purl.obolibrary.org/obo/CHEBI_17997"},{"id":"A1436","pred":"chebi_id","subj":"T1436","obj":"http://purl.obolibrary.org/obo/CHEBI_48502"},{"id":"A1437","pred":"chebi_id","subj":"T1437","obj":"http://purl.obolibrary.org/obo/CHEBI_17997"},{"id":"A1438","pred":"chebi_id","subj":"T1438","obj":"http://purl.obolibrary.org/obo/CHEBI_32875"},{"id":"A1439","pred":"chebi_id","subj":"T1438","obj":"http://purl.obolibrary.org/obo/CHEBI_29309"},{"id":"A1440","pred":"chebi_id","subj":"T1440","obj":"http://purl.obolibrary.org/obo/CHEBI_17790"},{"id":"A1441","pred":"chebi_id","subj":"T1441","obj":"http://purl.obolibrary.org/obo/CHEBI_15767"},{"id":"A1442","pred":"chebi_id","subj":"T1442","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1443","pred":"chebi_id","subj":"T1443","obj":"http://purl.obolibrary.org/obo/CHEBI_85365"},{"id":"A1444","pred":"chebi_id","subj":"T1444","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1445","pred":"chebi_id","subj":"T1445","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1446","pred":"chebi_id","subj":"T1446","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1447","pred":"chebi_id","subj":"T1447","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1448","pred":"chebi_id","subj":"T1824","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1449","pred":"chebi_id","subj":"T1449","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1450","pred":"chebi_id","subj":"T1450","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1451","pred":"chebi_id","subj":"T1451","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1452","pred":"chebi_id","subj":"T1452","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1453","pred":"chebi_id","subj":"T1453","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1454","pred":"chebi_id","subj":"T1454","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1455","pred":"chebi_id","subj":"T1455","obj":"http://purl.obolibrary.org/obo/CHEBI_49637"},{"id":"A1456","pred":"chebi_id","subj":"T1456","obj":"http://purl.obolibrary.org/obo/CHEBI_73613"},{"id":"A1457","pred":"chebi_id","subj":"T1457","obj":"http://purl.obolibrary.org/obo/CHEBI_73509"}],"text":"N-((1S)-1-{[((1S)-3-(Benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)amino]carbonyl}-3-methylbutyl)-4-methoxy-N-methyl-1H-indole-2-carboxamide\nFollowing the procedure described for the preparation of N-[(1S)-2-[((1S)-3-(benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)amino]-1-(cyclohexylmethyl)-2-oxoethyl]-4-methoxy-1H-indole-2-carboxamide but substituting N1-((1S)-3-(benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)-N2-(tert-butoxycarbonyl)-N2-methyl-l-leucinamide and making noncritical variations provided a crude brown oil. This material was purified by Biotage flash chromatography, eluting with methanol/dichloromethane to afford the title compound as a clear oil, 67 mg, 48%. 1H NMR (400 MHz, CDCl3) δ 9.83 (s, 1H), 7.95 (s, 1H), 7.26–7.36 (m, 5H), 7.18 (t, J = 8.0 Hz, 1H), 7.04 (d, J = 8.3 Hz, 1H), 7.00 (s, 1H), 6.48 (d, J = 7.8 Hz, 1H), 5.87 (s, 1H), 5.18–5.27 (m, 1H), 4.70 (s, 1H), 4.50–4.63 (m, 2H), 4.16–4.36 (m, 2H), 3.93 (s, 3H), 3.32 (s, 3H), 3.03–3.18 (m, 2H), 2.22 (s, 2H), 1.91–2.02 (m, 1H), 1.81 (t, J = 7.3 Hz, 3H), 1.66–1.72 (m, 1H), 1.55 (s, 1H), 0.87–1.01 (m, 6H); MS (API-ES−) for C32H40N4O6m/z 576.7 (M – H)−."}

    LitCovid-sentences

    {"project":"LitCovid-sentences","denotations":[{"id":"T498","span":{"begin":0,"end":155},"obj":"Sentence"},{"id":"T499","span":{"begin":156,"end":569},"obj":"Sentence"},{"id":"T500","span":{"begin":570,"end":724},"obj":"Sentence"},{"id":"T501","span":{"begin":725,"end":1179},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"N-((1S)-1-{[((1S)-3-(Benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)amino]carbonyl}-3-methylbutyl)-4-methoxy-N-methyl-1H-indole-2-carboxamide\nFollowing the procedure described for the preparation of N-[(1S)-2-[((1S)-3-(benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)amino]-1-(cyclohexylmethyl)-2-oxoethyl]-4-methoxy-1H-indole-2-carboxamide but substituting N1-((1S)-3-(benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)-N2-(tert-butoxycarbonyl)-N2-methyl-l-leucinamide and making noncritical variations provided a crude brown oil. This material was purified by Biotage flash chromatography, eluting with methanol/dichloromethane to afford the title compound as a clear oil, 67 mg, 48%. 1H NMR (400 MHz, CDCl3) δ 9.83 (s, 1H), 7.95 (s, 1H), 7.26–7.36 (m, 5H), 7.18 (t, J = 8.0 Hz, 1H), 7.04 (d, J = 8.3 Hz, 1H), 7.00 (s, 1H), 6.48 (d, J = 7.8 Hz, 1H), 5.87 (s, 1H), 5.18–5.27 (m, 1H), 4.70 (s, 1H), 4.50–4.63 (m, 2H), 4.16–4.36 (m, 2H), 3.93 (s, 3H), 3.32 (s, 3H), 3.03–3.18 (m, 2H), 2.22 (s, 2H), 1.91–2.02 (m, 1H), 1.81 (t, J = 7.3 Hz, 3H), 1.66–1.72 (m, 1H), 1.55 (s, 1H), 0.87–1.01 (m, 6H); MS (API-ES−) for C32H40N4O6m/z 576.7 (M – H)−."}

    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"1696","span":{"begin":643,"end":651},"obj":"Chemical"},{"id":"1697","span":{"begin":652,"end":667},"obj":"Chemical"}],"attributes":[{"id":"A1696","pred":"tao:has_database_id","subj":"1696","obj":"MESH:D000432"},{"id":"A1697","pred":"tao:has_database_id","subj":"1697","obj":"MESH:D008752"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"N-((1S)-1-{[((1S)-3-(Benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)amino]carbonyl}-3-methylbutyl)-4-methoxy-N-methyl-1H-indole-2-carboxamide\nFollowing the procedure described for the preparation of N-[(1S)-2-[((1S)-3-(benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)amino]-1-(cyclohexylmethyl)-2-oxoethyl]-4-methoxy-1H-indole-2-carboxamide but substituting N1-((1S)-3-(benzyloxy)-2-oxo-1-{[(3S)-2-oxopyrrolidin-3-yl]methyl}propyl)-N2-(tert-butoxycarbonyl)-N2-methyl-l-leucinamide and making noncritical variations provided a crude brown oil. This material was purified by Biotage flash chromatography, eluting with methanol/dichloromethane to afford the title compound as a clear oil, 67 mg, 48%. 1H NMR (400 MHz, CDCl3) δ 9.83 (s, 1H), 7.95 (s, 1H), 7.26–7.36 (m, 5H), 7.18 (t, J = 8.0 Hz, 1H), 7.04 (d, J = 8.3 Hz, 1H), 7.00 (s, 1H), 6.48 (d, J = 7.8 Hz, 1H), 5.87 (s, 1H), 5.18–5.27 (m, 1H), 4.70 (s, 1H), 4.50–4.63 (m, 2H), 4.16–4.36 (m, 2H), 3.93 (s, 3H), 3.32 (s, 3H), 3.03–3.18 (m, 2H), 2.22 (s, 2H), 1.91–2.02 (m, 1H), 1.81 (t, J = 7.3 Hz, 3H), 1.66–1.72 (m, 1H), 1.55 (s, 1H), 0.87–1.01 (m, 6H); MS (API-ES−) for C32H40N4O6m/z 576.7 (M – H)−."}