PMC:7571312 / 124168-125246
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T21 | 6-11 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T22 | 34-39 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T23 | 184-189 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T24 | 250-254 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T25 | 324-328 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T26 | 492-497 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T27 | 559-564 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T28 | 754-759 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T29 | 813-818 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T30 | 1013-1018 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
| T31 | 1072-1077 | Body_part | denotes | cells | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T137 | 0-11 | http://purl.obolibrary.org/obo/CLO_0052043 | denotes | MRC-5 cells |
| T138 | 0-11 | http://purl.obolibrary.org/obo/CLO_0052044 | denotes | MRC-5 cells |
| T139 | 0-11 | http://purl.obolibrary.org/obo/CLO_0052045 | denotes | MRC-5 cells |
| T140 | 34-39 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T141 | 184-189 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T142 | 250-254 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T143 | 324-328 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T144 | 456-462 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signal |
| T145 | 492-497 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T146 | 514-520 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signal |
| T147 | 559-564 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T148 | 717-723 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signal |
| T149 | 754-759 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T150 | 813-818 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T151 | 974-980 | http://purl.obolibrary.org/obo/SO_0000418 | denotes | signal |
| T152 | 1013-1018 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T153 | 1072-1077 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T57484 | 55-65 | Chemical | denotes | phenol red | http://purl.obolibrary.org/obo/CHEBI_31991 |
| T51593 | 55-61 | Chemical | denotes | phenol | http://purl.obolibrary.org/obo/CHEBI_15882 |
| T86896 | 368-371 | Chemical | denotes | dye | http://purl.obolibrary.org/obo/CHEBI_37958 |
| T37376 | 429-440 | Chemical | denotes | neutral red | http://purl.obolibrary.org/obo/CHEBI_86370 |
| T67078 | 690-701 | Chemical | denotes | neutral red | http://purl.obolibrary.org/obo/CHEBI_86370 |
| T96579 | 947-958 | Chemical | denotes | neutral red | http://purl.obolibrary.org/obo/CHEBI_86370 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 250-260 | http://purl.obolibrary.org/obo/GO_0008219 | denotes | cell death |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T671 | 0-83 | Sentence | denotes | MRC-5 cells were plated at 10 000 cells per well using phenol red-free MEM (Gibco). |
| T672 | 84-309 | Sentence | denotes | Various concentrations of compound (320, 100, 33, 10, 3.3, 1.0, 0.3, or 0.1 μM) were added, and the cells were infected with an amount of hCoV 229E, which caused 80% cell death in 4 days or mock-infected with the medium only. |
| T673 | 310-565 | Sentence | denotes | After 4 days, cell viability was determined using the XTT dye reduction method.53 Data are expressed as the percent of neutral red or luminescent signal in wells of compound-treated cells compared to the signal in wells of uninfected, compound-free cells. |
| T674 | 566-819 | Sentence | denotes | The 50% effective concentration (EC50) is calculated as the concentration of the compound that increases the percent of the neutral red or luminescent signal in infected, compound-treated cells to 50% of that produced by uninfected, compound-free cells. |
| T675 | 820-1078 | Sentence | denotes | The 50% cytotoxicity concentration (CC50) is calculated as the concentration of the compound that decreases the percent of the neutral red or luminescent signal in uninfected, compound-treated cells to 50% of that produced in uninfected, compound-free cells. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 2163 | 222-231 | Species | denotes | hCoV 229E | Tax:11137 |
| 2164 | 55-65 | Chemical | denotes | phenol red | MESH:D010637 |
| 2165 | 195-203 | Disease | denotes | infected | MESH:D007239 |
| 2166 | 274-287 | Disease | denotes | mock-infected | MESH:D007239 |
| 2167 | 727-735 | Disease | denotes | infected | MESH:D007239 |
| 2168 | 828-840 | Disease | denotes | cytotoxicity | MESH:D064420 |
| 2169 | 0-5 | CellLine | denotes | MRC-5 | CVCL:0440 |
2_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 33054210-3409223-61913464 | 389-391 | 3409223 | denotes | 53 |