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PMC:7417187 / 9790-10501 JSONTXT

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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T23 290-296 Body_part denotes sputum http://purl.org/sig/ont/fma/fma312401
T24 339-345 Body_part denotes throat http://purl.org/sig/ont/fma/fma228738

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T17 290-296 Body_part denotes sputum http://purl.obolibrary.org/obo/UBERON_0007311
T18 339-345 Body_part denotes throat http://purl.obolibrary.org/obo/UBERON_0000341

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T74 217-225 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T75 334-345 Disease denotes sore throat http://purl.obolibrary.org/obo/MONDO_0002258
T76 347-355 Disease denotes diarrhea http://purl.obolibrary.org/obo/MONDO_0001673
T77 448-456 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T78 489-497 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T79 498-507 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T80 555-563 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T81 585-593 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T82 667-676 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T83 690-698 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T84 690-694 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T76 184-185 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T77 427-428 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T78 474-475 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T79 583-584 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T80 681-685 http://purl.obolibrary.org/obo/UBERON_0000473 denotes test

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T5 94-100 Chemical denotes oxygen http://purl.obolibrary.org/obo/CHEBI_25805

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
210 143-150 Species denotes patient Tax:9606
211 156-164 Species denotes patients Tax:9606
212 522-528 Species denotes people Tax:9606
213 690-700 Species denotes SARS-CoV-2 Tax:2697049
214 94-100 Chemical denotes oxygen MESH:D010100
215 217-225 Disease denotes COVID-19 MESH:C000657245
216 236-241 Disease denotes fever MESH:D005334
217 243-248 Disease denotes cough MESH:D003371
218 250-257 Disease denotes fatigue MESH:D005221
219 259-267 Disease denotes anorexia MESH:D000855
220 269-288 Disease denotes shortness of breath MESH:D004417
221 334-345 Disease denotes sore throat MESH:D010608
222 347-355 Disease denotes diarrhea MESH:D003967
223 448-456 Disease denotes COVID-19 MESH:C000657245
224 489-497 Disease denotes COVID-19 MESH:C000657245
225 498-507 Disease denotes infection MESH:D007239
226 541-549 Disease denotes infected MESH:D007239
227 555-563 Disease denotes COVID-19 MESH:C000657245
228 585-593 Disease denotes COVID-19 MESH:C000657245
229 667-676 Disease denotes infection MESH:D007239

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T6 317-322 http://purl.obolibrary.org/obo/GO_0050909 denotes taste

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T89 0-73 Sentence denotes At presentation, history was recorded and clinical examination performed.
T90 74-151 Sentence denotes The temperature and oxygen saturation at room air recorded for every patient.
T91 152-613 Sentence denotes All patients were screened with a series of questions related to COVID-19 symptoms (fever, cough, fatigue, anorexia, shortness of breath, sputum production, loss of taste and smell, sore throat, diarrhea, nasal congestion) as well as TOCC information (travel to regions with a high prevalence of COVID-19, occupation with a high risk of COVID-19 infection, contact with people known to be infected with COVID-19, or proximity with a COVID-19 positive case) [8].
T92 614-711 Sentence denotes Information was also obtained regarding the previous infection and test for SARS-CoV-2 (Table 3).

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T16 236-241 Phenotype denotes fever http://purl.obolibrary.org/obo/HP_0001945
T17 243-248 Phenotype denotes cough http://purl.obolibrary.org/obo/HP_0012735
T18 250-257 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T19 259-267 Phenotype denotes anorexia http://purl.obolibrary.org/obo/HP_0002039
T20 269-288 Phenotype denotes shortness of breath http://purl.obolibrary.org/obo/HP_0002098
T21 309-322 Phenotype denotes loss of taste http://purl.obolibrary.org/obo/HP_0000223
T22 334-345 Phenotype denotes sore throat http://purl.obolibrary.org/obo/HP_0033050
T23 347-355 Phenotype denotes diarrhea http://purl.obolibrary.org/obo/HP_0002014
T24 357-373 Phenotype denotes nasal congestion http://purl.obolibrary.org/obo/HP_0001742

LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T76 217-225 SP_7 denotes COVID-19
T77 282-288 UBERON:0002048 denotes breath
T78 290-296 UBERON:0007311 denotes sputum
T79 317-322 GO:0050909 denotes taste
T80 339-345 UBERON:0000341 denotes throat
T81 357-362 UBERON:0000004 denotes nasal
T82 448-456 SP_7 denotes COVID-19
T83 489-497 SP_7 denotes COVID-19
T84 522-528 NCBITaxon:9606 denotes people
T85 555-563 SP_7 denotes COVID-19
T86 585-593 SP_7 denotes COVID-19
T87 690-700 SP_7 denotes SARS-CoV-2
T62794 217-225 SP_7 denotes COVID-19
T99035 282-288 UBERON:0002048 denotes breath
T18322 290-296 UBERON:0007311 denotes sputum
T95009 317-322 GO:0050909 denotes taste
T25782 339-345 UBERON:0000341 denotes throat
T28733 357-362 UBERON:0000004 denotes nasal
T61390 448-456 SP_7 denotes COVID-19
T32900 489-497 SP_7 denotes COVID-19
T78583 522-528 NCBITaxon:9606 denotes people
T41281 555-563 SP_7 denotes COVID-19
T50587 585-593 SP_7 denotes COVID-19
T97853 690-700 SP_7 denotes SARS-CoV-2

2_test

Id Subject Object Predicate Lexical cue
32789084-32282441-23840889 610-611 32282441 denotes 8