PMC:7417187 / 18093-20012
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T37 | 1057-1062 | Body_part | denotes | spine | http://purl.org/sig/ont/fma/fma13478 |
| T38 | 1153-1161 | Body_part | denotes | vertebra | http://purl.org/sig/ont/fma/fma9914 |
| T39 | 1236-1241 | Body_part | denotes | spine | http://purl.org/sig/ont/fma/fma13478 |
| T40 | 1309-1321 | Body_part | denotes | L5 vertebra | http://purl.org/sig/ont/fma/fma13076 |
| T41 | 1396-1401 | Body_part | denotes | spine | http://purl.org/sig/ont/fma/fma13478 |
| T42 | 1612-1617 | Body_part | denotes | spine | http://purl.org/sig/ont/fma/fma13478 |
| T43 | 1621-1633 | Body_part | denotes | L5 vertebrae | http://purl.org/sig/ont/fma/fma13076 |
| T44 | 1624-1633 | Body_part | denotes | vertebrae | http://purl.org/sig/ont/fma/fma71515 |
| T45 | 1662-1667 | Body_part | denotes | D NA | http://purl.org/sig/ont/fma/fma74412 |
| T46 | 1762-1768 | Body_part | denotes | throat | http://purl.org/sig/ont/fma/fma228738 |
| T47 | 1806-1818 | Body_part | denotes | Cauda Equina | http://purl.org/sig/ont/fma/fma52590 |
| T48 | 1840-1859 | Body_part | denotes | intervertebral Disc | http://purl.org/sig/ont/fma/fma10446 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T32 | 1153-1161 | Body_part | denotes | vertebra | http://purl.obolibrary.org/obo/UBERON_0002412 |
| T33 | 1313-1321 | Body_part | denotes | vertebra | http://purl.obolibrary.org/obo/UBERON_0002412 |
| T34 | 1624-1633 | Body_part | denotes | vertebrae | http://purl.obolibrary.org/obo/UBERON_0002412 |
| T35 | 1762-1768 | Body_part | denotes | throat | http://purl.obolibrary.org/obo/UBERON_0000341 |
| T36 | 1806-1818 | Body_part | denotes | Cauda Equina | http://purl.obolibrary.org/obo/UBERON_0012337 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T117 | 116-122 | Disease | denotes | trauma | http://purl.obolibrary.org/obo/MONDO_0021178 |
| T118 | 1041-1053 | Disease | denotes | Tuberculosis | http://purl.obolibrary.org/obo/MONDO_0018076 |
| T119 | 1106-1113 | Disease | denotes | abscess | http://purl.obolibrary.org/obo/MONDO_0005227 |
| T120 | 1220-1232 | Disease | denotes | Tuberculosis | http://purl.obolibrary.org/obo/MONDO_0018076 |
| T121 | 1266-1273 | Disease | denotes | abscess | http://purl.obolibrary.org/obo/MONDO_0005227 |
| T122 | 1380-1392 | Disease | denotes | Tuberculosis | http://purl.obolibrary.org/obo/MONDO_0018076 |
| T123 | 1431-1438 | Disease | denotes | abscess | http://purl.obolibrary.org/obo/MONDO_0005227 |
| T124 | 1596-1608 | Disease | denotes | Tuberculosis | http://purl.obolibrary.org/obo/MONDO_0018076 |
| T125 | 1653-1660 | Disease | denotes | abscess | http://purl.obolibrary.org/obo/MONDO_0005227 |
| T126 | 1757-1768 | Disease | denotes | Sore throat | http://purl.obolibrary.org/obo/MONDO_0002258 |
| T127 | 1806-1827 | Disease | denotes | Cauda Equina Syndrome | http://purl.obolibrary.org/obo/MONDO_0005693 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T114 | 175-182 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T115 | 205-209 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T116 | 248-253 | http://purl.obolibrary.org/obo/CLO_0001053 | denotes | 1 21 |
| T117 | 274-278 | http://purl.obolibrary.org/obo/CLO_0001608 | denotes | A 7 |
| T118 | 308-310 | http://purl.obolibrary.org/obo/CLO_0007170 | denotes | L2 |
| T119 | 359-363 | http://purl.obolibrary.org/obo/CLO_0002860 | denotes | E 2 |
| T120 | 418-421 | http://purl.obolibrary.org/obo/CLO_0002658 | denotes | D11 |
| T121 | 418-421 | http://purl.obolibrary.org/obo/CLO_0002660 | denotes | D11 |
| T122 | 423-427 | http://purl.obolibrary.org/obo/CLO_0001608 | denotes | A 7 |
| T123 | 539-541 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
| T124 | 574-578 | http://purl.obolibrary.org/obo/CLO_0001608 | denotes | A 7 |
| T125 | 607-609 | http://purl.obolibrary.org/obo/CLO_0007170 | denotes | L2 |
| T126 | 664-666 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
| T127 | 701-705 | http://purl.obolibrary.org/obo/CLO_0001608 | denotes | A 7 |
| T128 | 734-736 | http://purl.obolibrary.org/obo/CLO_0007170 | denotes | L2 |
| T129 | 768-770 | http://purl.obolibrary.org/obo/CLO_0050507 | denotes | 22 |
| T130 | 782-784 | http://purl.obolibrary.org/obo/CLO_0007170 | denotes | L2 |
| T131 | 786-790 | http://purl.obolibrary.org/obo/CLO_0002860 | denotes | E 2 |
| T132 | 948-952 | http://purl.obolibrary.org/obo/CLO_0001608 | denotes | A 7 |
| T133 | 996-998 | http://purl.obolibrary.org/obo/CLO_0001382 | denotes | 48 |
| T134 | 1071-1073 | http://purl.obolibrary.org/obo/CLO_0050284 | denotes | D9 |
| T135 | 1081-1083 | http://purl.obolibrary.org/obo/CLO_0007170 | denotes | L2 |
| T136 | 1245-1247 | http://purl.obolibrary.org/obo/CLO_0007191 | denotes | L5 |
| T137 | 1309-1311 | http://purl.obolibrary.org/obo/CLO_0007191 | denotes | L5 |
| T138 | 1349-1355 | http://purl.obolibrary.org/obo/CLO_0053003 | denotes | 11 25 |
| T139 | 1402-1404 | http://purl.obolibrary.org/obo/CLO_0007170 | denotes | L2 |
| T140 | 1474-1476 | http://purl.obolibrary.org/obo/CLO_0007191 | denotes | L5 |
| T141 | 1621-1623 | http://purl.obolibrary.org/obo/CLO_0007191 | denotes | L5 |
| T142 | 1701-1703 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T143 | 1863-1865 | http://purl.obolibrary.org/obo/CLO_0007191 | denotes | L5 |
| T144 | 1867-1868 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | B |
| T145 | 1889-1891 | http://purl.obolibrary.org/obo/CLO_0007191 | denotes | L5 |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T8 | 70-72 | Chemical | denotes | PF | http://purl.obolibrary.org/obo/CHEBI_74795|http://purl.obolibrary.org/obo/CHEBI_90284 |
| T10 | 300-302 | Chemical | denotes | PF | http://purl.obolibrary.org/obo/CHEBI_74795|http://purl.obolibrary.org/obo/CHEBI_90284 |
| T12 | 316-318 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T13 | 320-322 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T14 | 383-385 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T15 | 387-389 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T16 | 391-393 | Chemical | denotes | Na | http://purl.obolibrary.org/obo/CHEBI_26708 |
| T17 | 447-449 | Chemical | denotes | PF | http://purl.obolibrary.org/obo/CHEBI_74795|http://purl.obolibrary.org/obo/CHEBI_90284 |
| T19 | 598-600 | Chemical | denotes | PF | http://purl.obolibrary.org/obo/CHEBI_74795|http://purl.obolibrary.org/obo/CHEBI_90284 |
| T21 | 725-727 | Chemical | denotes | PF | http://purl.obolibrary.org/obo/CHEBI_74795|http://purl.obolibrary.org/obo/CHEBI_90284 |
| T23 | 742-744 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T24 | 746-748 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T25 | 810-812 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T26 | 814-816 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T27 | 818-820 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T28 | 873-875 | Chemical | denotes | PF | http://purl.obolibrary.org/obo/CHEBI_74795|http://purl.obolibrary.org/obo/CHEBI_90284 |
| T30 | 891-893 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T31 | 895-897 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T32 | 972-974 | Chemical | denotes | PF | http://purl.obolibrary.org/obo/CHEBI_74795|http://purl.obolibrary.org/obo/CHEBI_90284 |
| T34 | 988-990 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T35 | 992-994 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T36 | 1118-1120 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T37 | 1167-1169 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T38 | 1171-1173 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T39 | 1278-1280 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T40 | 1327-1329 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T41 | 1331-1333 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T42 | 1443-1445 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T43 | 1465-1467 | Chemical | denotes | PF | http://purl.obolibrary.org/obo/CHEBI_74795|http://purl.obolibrary.org/obo/CHEBI_90284 |
| T45 | 1665-1667 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T46 | 1687-1689 | Chemical | denotes | PF | http://purl.obolibrary.org/obo/CHEBI_74795|http://purl.obolibrary.org/obo/CHEBI_90284 |
| T48 | 1871-1873 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T49 | 1897-1899 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
| T50 | 1901-1903 | Chemical | denotes | NA | http://purl.obolibrary.org/obo/CHEBI_33696 |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 382 | 257-260 | Gene | denotes | RTA | Gene:116535 |
| 383 | 116-122 | Disease | denotes | trauma | MESH:D014947 |
| 384 | 169-174 | Disease | denotes | COVID | MESH:C000657245 |
| 385 | 199-204 | Disease | denotes | COVID | MESH:C000657245 |
| 386 | 1041-1053 | Disease | denotes | Tuberculosis | MESH:D014376 |
| 387 | 1092-1116 | Disease | denotes | paravertebral abscess E | MESH:D000038 |
| 388 | 1220-1232 | Disease | denotes | Tuberculosis | MESH:D014376 |
| 389 | 1380-1392 | Disease | denotes | Tuberculosis | MESH:D014376 |
| 390 | 1417-1441 | Disease | denotes | paravertebral abscess C | MESH:C537418 |
| 391 | 1522-1527 | Disease | denotes | Fever | MESH:D005334 |
| 392 | 1531-1538 | Disease | denotes | Fatigue | MESH:D005221 |
| 393 | 1596-1608 | Disease | denotes | Tuberculosis | MESH:D014376 |
| 394 | 1749-1754 | Disease | denotes | Fever | MESH:D005334 |
| 395 | 1803-1827 | Disease | denotes | F Cauda Equina Syndrome | MESH:D011128 |
| 397 | 9-16 | Species | denotes | Patient | Tax:9606 |
| 399 | 42-45 | Gene | denotes | RTA | Gene:116535 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T171 | 0-41 | Sentence | denotes | Table 4 Patient demographics and results |
| T172 | 42-46 | Sentence | denotes | RTA: |
| T173 | 47-73 | Sentence | denotes | Road traffic accident; PF: |
| T174 | 74-92 | Sentence | denotes | Pedicular fixation |
| T175 | 93-97 | Sentence | denotes | Sno. |
| T176 | 99-247 | Sentence | denotes | Age/sex Mode of trauma Diagnosis ASIA Score TLICS Score Surgery COVID testing Indication for COVID test Result Time interval Hospital Stay |
| T177 | 248-338 | Sentence | denotes | 1 21/M RTA Burst # L1 A 7 Decompression and PF D12-L2 No NA NA 24 hrs 3 days |
| T178 | 339-401 | Sentence | denotes | 2 40/M Fall #D8 E 2 Conservative No NA NA Na 1 days |
| T179 | 402-552 | Sentence | denotes | 3 50/M Fall #D11 A 7 Decompression and PF D10 to D12 Yes 1)residence at High prevalence area 2)Spo2 – 88% on room air Negative 48 hrs 3 day |
| T180 | 553-679 | Sentence | denotes | 4 30/M fall # L1 A 7 Decompression and PF D12to L2 Yes 1) Residence at High prevalence area Negative 48 hrs 3 days |
| T181 | 680-764 | Sentence | denotes | 5 25/M Fall # L1 A 7 Decompression and PF D12to L2 NO NA NA 24 hrs 3 days |
| T182 | 765-827 | Sentence | denotes | 6 22/F Fall # L2 E 2 Conservative No NA NA NA 1 day |
| T183 | 828-912 | Sentence | denotes | 7 63/F Fall # L1 D 8 Decompression and PF D10 to L3 No NA NA 48hrs 3 days |
| T184 | 913-1010 | Sentence | denotes | 8 43/M Fall #Dislocation D6/D7 A 7 Decompression and PF D5to D8 No NA NA 48 hrs 3 days |
| T185 | 1011-1188 | Sentence | denotes | 9 42/M Infective pathology Tuberculosis of spine from D8,D9,D12,L1,L2,L3 with paravertebral abscess E NA Transpedicular Biopsy from D12 vertebra No NA NA 24 hrs 1 day |
| T186 | 1189-1348 | Sentence | denotes | 10 33/F Infective apthology Tuberculosis of spine L4-L5 with paravertbral abscess E NA Transpedicular Biopsy from L5 vertebra No NA NA 24 hrs 1 day |
| T187 | 1349-1564 | Sentence | denotes | 11 25/M Infective apthology Tuberculosis of spine L2 to L3 with paravertebral abscess C NA Decompression and PF D12to L5 Yes 1) Residence at High prevalence area 2)Fever 3) Fatigue Negative 24 hrs 5 days |
| T188 | 1565-1795 | Sentence | denotes | 12 42/M Infective apthology Tuberculosis of spine L4-L5 vertebrae with paravertebral abscess D NA Decompression and PF from L3 to S1 Yes 1) Residence at High prevalence area 2)Fever 3)Sore throat Negative 24 days 5 days |
| T189 | 1796-1919 | Sentence | denotes | 13 24/F Cauda Equina Syndrome Proloapsed intervertebral Disc L4-L5 B NA Discectomy L4-L5 NO NA NA 24 hrs 3 days |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T39 | 1106-1113 | Phenotype | denotes | abscess | http://purl.obolibrary.org/obo/HP_0025615 |
| T40 | 1266-1273 | Phenotype | denotes | abscess | http://purl.obolibrary.org/obo/HP_0025615 |
| T41 | 1431-1438 | Phenotype | denotes | abscess | http://purl.obolibrary.org/obo/HP_0025615 |
| T42 | 1522-1527 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T43 | 1531-1538 | Phenotype | denotes | Fatigue | http://purl.obolibrary.org/obo/HP_0012378 |
| T44 | 1653-1660 | Phenotype | denotes | abscess | http://purl.obolibrary.org/obo/HP_0025615 |
| T45 | 1749-1754 | Phenotype | denotes | Fever | http://purl.obolibrary.org/obo/HP_0001945 |
| T46 | 1757-1768 | Phenotype | denotes | Sore throat | http://purl.obolibrary.org/obo/HP_0033050 |