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LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T4 48-51 Body_part denotes IgM http://purl.org/sig/ont/fma/fma62873
T5 78-91 Body_part denotes immune system http://purl.org/sig/ont/fma/fma9825
T6 213-226 Body_part denotes myelin sheath http://purl.org/sig/ont/fma/fma62983
T7 241-247 Body_part denotes myelin http://purl.org/sig/ont/fma/fma62977
T8 259-271 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T9 448-454 Body_part denotes lysine http://purl.org/sig/ont/fma/fma82758
T10 455-463 Body_part denotes backbone http://purl.org/sig/ont/fma/fma13478
T11 651-654 Body_part denotes IgM http://purl.org/sig/ont/fma/fma62873
T12 679-684 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T13 711-724 Body_part denotes immune system http://purl.org/sig/ont/fma/fma9825
T14 832-845 Body_part denotes myelin sheath http://purl.org/sig/ont/fma/fma62983
T15 946-961 Body_part denotes polysaccharides http://purl.org/sig/ont/fma/fma82746
T16 1126-1133 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T17 1216-1231 Body_part denotes polysaccharides http://purl.org/sig/ont/fma/fma82746
T18 1258-1273 Body_part denotes polysaccharides http://purl.org/sig/ont/fma/fma82746
T19 1287-1294 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T20 1355-1367 Body_part denotes Carbohydrate http://purl.org/sig/ont/fma/fma82737
T21 1406-1414 Body_part denotes backbone http://purl.org/sig/ont/fma/fma13478
T22 1462-1469 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T23 1503-1516 Body_part denotes carbohydrates http://purl.org/sig/ont/fma/fma82737
T24 1754-1767 Body_part denotes carbohydrates http://purl.org/sig/ont/fma/fma82737

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 78-91 Body_part denotes immune system http://purl.obolibrary.org/obo/UBERON_0002405
T3 213-226 Body_part denotes myelin sheath http://purl.obolibrary.org/obo/UBERON_0000347
T4 213-219 Body_part denotes myelin http://purl.obolibrary.org/obo/UBERON_0000345
T5 241-247 Body_part denotes myelin http://purl.obolibrary.org/obo/UBERON_0000345
T6 679-684 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T7 711-724 Body_part denotes immune system http://purl.obolibrary.org/obo/UBERON_0002405
T8 832-845 Body_part denotes myelin sheath http://purl.obolibrary.org/obo/UBERON_0000347
T9 832-838 Body_part denotes myelin http://purl.obolibrary.org/obo/UBERON_0000345

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T2 20-38 Disease denotes neurologic disease http://purl.obolibrary.org/obo/MONDO_0005071
T3 52-73 Disease denotes monoclonal gammopathy http://purl.obolibrary.org/obo/MONDO_0004960
T4 859-869 Disease denotes neuropathy http://purl.obolibrary.org/obo/MONDO_0005244
T5 1250-1257 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T6 1520-1527 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 1859-1877 Disease denotes neurologic disease http://purl.obolibrary.org/obo/MONDO_0005071

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T6 13-14 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T7 78-91 http://purl.obolibrary.org/obo/UBERON_0002405 denotes immune system
T8 100-101 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T9 138-143 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes Human
T10 162-167 http://purl.obolibrary.org/obo/CLO_0003789 denotes HNK‐1
T11 192-193 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T12 300-301 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T13 425-426 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T14 502-507 http://purl.obolibrary.org/obo/CLO_0003789 denotes HNK‐1
T15 679-684 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T16 679-684 http://www.ebi.ac.uk/efo/EFO_0000296 denotes blood
T17 696-706 http://purl.obolibrary.org/obo/CLO_0001658 denotes activating
T18 711-724 http://purl.obolibrary.org/obo/UBERON_0002405 denotes immune system
T19 749-750 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T20 785-786 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T21 904-905 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T22 1176-1181 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T23 1312-1313 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T24 1344-1345 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T25 1393-1394 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T26 1471-1472 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T27 1554-1559 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T28 1579-1580 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T29 1852-1853 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T30 1921-1922 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T4 111-124 Chemical denotes trisaccharide http://purl.obolibrary.org/obo/CHEBI_27150
T5 169-176 Chemical denotes epitope http://purl.obolibrary.org/obo/CHEBI_53000
T6 259-271 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T7 448-454 Chemical denotes lysine http://purl.obolibrary.org/obo/CHEBI_18019|http://purl.obolibrary.org/obo/CHEBI_25094
T9 508-521 Chemical denotes trisaccharide http://purl.obolibrary.org/obo/CHEBI_27150
T10 540-546 Chemical denotes phenyl http://purl.obolibrary.org/obo/CHEBI_30396
T11 560-565 Chemical denotes sulfo http://purl.obolibrary.org/obo/CHEBI_29922
T12 946-961 Chemical denotes polysaccharides http://purl.obolibrary.org/obo/CHEBI_18154
T13 1087-1098 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T14 1126-1133 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T15 1216-1231 Chemical denotes polysaccharides http://purl.obolibrary.org/obo/CHEBI_18154
T16 1258-1273 Chemical denotes polysaccharides http://purl.obolibrary.org/obo/CHEBI_18154
T17 1287-1294 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T18 1395-1402 Chemical denotes carrier http://purl.obolibrary.org/obo/CHEBI_78059
T19 1462-1469 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T20 1503-1516 Chemical denotes carbohydrates http://purl.obolibrary.org/obo/CHEBI_16646
T21 1754-1767 Chemical denotes carbohydrates http://purl.obolibrary.org/obo/CHEBI_16646

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T2 31-38 http://purl.obolibrary.org/obo/OGMS_0000031 denotes disease
T3 679-684 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood
T4 787-797 http://purl.obolibrary.org/obo/IDO_0000450 denotes pathogenic
T5 1176-1181 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T6 1433-1448 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T7 1554-1559 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T8 1727-1742 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T9 1810-1817 http://purl.obolibrary.org/obo/OGMS_0000031 denotes disease
T10 1870-1877 http://purl.obolibrary.org/obo/OGMS_0000031 denotes disease

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T3 111-124 Chemical denotes trisaccharide http://purl.obolibrary.org/obo/CHEBI_27150
T4 259-271 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089
T5 448-454 Chemical denotes lysine http://purl.obolibrary.org/obo/CHEBI_18019|http://purl.obolibrary.org/obo/CHEBI_25094
T7 508-521 Chemical denotes trisaccharide http://purl.obolibrary.org/obo/CHEBI_27150
T8 540-546 Chemical denotes phenyl http://purl.obolibrary.org/obo/CHEBI_30396
T9 560-565 Chemical denotes sulfo http://purl.obolibrary.org/obo/CHEBI_29922
T10 627-632 Chemical denotes PPSGG http://purl.obolibrary.org/obo/CHEBI_137080
T11 946-961 Chemical denotes polysaccharides http://purl.obolibrary.org/obo/CHEBI_18154
T12 1087-1098 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T13 1126-1133 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T14 1216-1231 Chemical denotes polysaccharides http://purl.obolibrary.org/obo/CHEBI_18154
T15 1258-1273 Chemical denotes polysaccharides http://purl.obolibrary.org/obo/CHEBI_18154
T16 1287-1294 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T17 1462-1469 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T18 1503-1516 Chemical denotes carbohydrates http://purl.obolibrary.org/obo/CHEBI_16646
T19 1754-1767 Chemical denotes carbohydrates http://purl.obolibrary.org/obo/CHEBI_16646

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T2 138-143 Species denotes Human NCBItxid:9606
T3 1021-1029 Species denotes CoViD‐19 NCBItxid:2697049
T4 1250-1257 Species denotes COVID19 NCBItxid:2697049
T5 1520-1527 Species denotes COVID19 NCBItxid:2697049

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T5 0-8 Sentence denotes Abstract
T6 10-273 Sentence denotes In a rare neurologic disease known as IgM monoclonal gammopathy the immune system targets a sulfated trisaccharide known as the Human Natural Killer‐1 (HNK‐1) epitope that comprises a constituent of the myelin sheath known as MAG (myelin‐associated glycoprotein).
T7 274-725 Sentence denotes This Editorial highlights a study by Aliu and colleagues in the current issue of the Journal of Neurochemistry, in which the investigators constructed a biodegradable poly‐l‐lysine backbone with multiple copies of this sulfated HNK‐1 trisaccharide. This decoy, poly(phenyl disodium 3‐O‐sulfo‐β‐d‐glucopyranuronate)‐(1→3)‐β‐d‐galactopyranoside, known as PPSGG, removed anti‐MAG IgM autoantibodies from the blood, while not activating the immune system.
T8 726-870 Sentence denotes These findings provide a path for the selective removal of a pathogenic set of antibodies that target the myelin sheath resulting in neuropathy.
T9 871-1189 Sentence denotes These findings are applicable to a parallel strategy for the generation of polysaccharides similar to those present in the receptor‐binding domain of CoViD‐19, which might inhibit viral adhesion to its receptor, the angiotensin‐converting enzyme‐2 (ACE2) protein, thereby impairing cellular uptake of the virus itself.
T10 1190-1354 Sentence denotes The deployment of complex polysaccharides that mimic actual COVID19 polysaccharides on the spike protein may also provide a feasible structural basis for a vaccine.
T11 1355-1470 Sentence denotes Carbohydrate mimics, if conjugated to a carrier or backbone, might provoke an immune response to the spike protein.
T12 1471-1701 Sentence denotes A vaccine that targets critical carbohydrates on COVID19, and then neutralizes the virus would recapitulate a successful strategy employed in other microbial vaccines, like the pneumococcal vaccines and the meningococcal vaccines.
T13 1702-1818 Sentence denotes These vaccines direct an immune response to complex carbohydrates and successfully prevent life‐threatening disease.
T14 1819-1939 Sentence denotes This paper provides lessons from a rare neurologic disease that may teach us strategies applicable to a global pandemic.

LitCovid-sample-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 78-91 Body_part denotes immune system http://purl.obolibrary.org/obo/UBERON_0002405
T3 213-226 Body_part denotes myelin sheath http://purl.obolibrary.org/obo/UBERON_0000347
T4 241-247 Body_part denotes myelin http://purl.obolibrary.org/obo/UBERON_0000345
T5 679-684 Body_part denotes blood http://purl.obolibrary.org/obo/UBERON_0000178
T6 711-724 Body_part denotes immune system http://purl.obolibrary.org/obo/UBERON_0002405
T7 832-845 Body_part denotes myelin sheath http://purl.obolibrary.org/obo/UBERON_0000347

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
53 20-38 Disease denotes neurologic disease MESH:D020271
42 111-124 Chemical denotes trisaccharide MESH:D014312
33 162-167 Gene denotes HNK‐1 Gene:27087
34 236-239 Gene denotes MAG Gene:4099
35 241-271 Gene denotes myelin‐associated glycoprotein Gene:4099
43 441-454 Chemical denotes poly‐l‐lysine
36 502-507 Gene denotes HNK‐1 Gene:27087
44 508-521 Chemical denotes trisaccharide MESH:D014312
45 535-616 Chemical denotes poly(phenyl disodium 3‐O‐sulfo‐β‐d‐glucopyranuronate)‐(1→3)‐β‐d‐galactopyranoside
46 627-632 Chemical denotes PPSGG
41 647-650 Gene denotes MAG Gene:4099
54 859-869 Disease denotes neuropathy MESH:D009422
47 946-961 Chemical denotes polysaccharides MESH:D011134
55 1021-1029 Disease denotes CoViD‐19 MESH:C000657245
37 1087-1118 Gene denotes angiotensin‐converting enzyme‐2 Gene:59272
38 1120-1124 Gene denotes ACE2 Gene:59272
48 1216-1231 Chemical denotes polysaccharides MESH:D011134
49 1250-1273 Chemical denotes COVID19 polysaccharides
39 1281-1286 Gene denotes spike Gene:43740568
50 1355-1367 Chemical denotes Carbohydrate MESH:D002241
40 1456-1461 Gene denotes spike Gene:43740568
51 1503-1516 Chemical denotes carbohydrates MESH:D002241
56 1520-1527 Disease denotes COVID19 MESH:C000657245
57 1648-1660 Disease denotes pneumococcal MESH:D011008
58 1678-1691 Disease denotes meningococcal MESH:D008589
52 1754-1767 Chemical denotes carbohydrates MESH:D002241
59 1859-1877 Disease denotes neurologic disease MESH:D020271

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2 236-239 Protein denotes MAG https://www.uniprot.org/uniprot/Q567S4
T3 241-271 Protein denotes myelin‐associated glycoprotein https://www.uniprot.org/uniprot/Q567S4|https://www.uniprot.org/uniprot/Q15489|https://www.uniprot.org/uniprot/P20917|https://www.uniprot.org/uniprot/P20916|https://www.uniprot.org/uniprot/P16880|https://www.uniprot.org/uniprot/P07723|https://www.uniprot.org/uniprot/P07722|https://www.uniprot.org/uniprot/P02685|https://www.uniprot.org/uniprot/F5GYC0|https://www.uniprot.org/uniprot/B7Z2E5|https://www.uniprot.org/uniprot/A0A087WPR1
T14 647-650 Protein denotes MAG https://www.uniprot.org/uniprot/Q567S4
T15 1087-1118 Protein denotes angiotensin‐converting enzyme‐2 https://www.uniprot.org/uniprot/Q9UFZ6|https://www.uniprot.org/uniprot/Q9NRA7|https://www.uniprot.org/uniprot/Q9BYF1|https://www.uniprot.org/uniprot/Q99N71|https://www.uniprot.org/uniprot/Q99N70|https://www.uniprot.org/uniprot/Q8R0I0|https://www.uniprot.org/uniprot/Q86WT0|https://www.uniprot.org/uniprot/Q6UWP0|https://www.uniprot.org/uniprot/Q5RFN1|https://www.uniprot.org/uniprot/Q5EGZ1|https://www.uniprot.org/uniprot/Q58DD0|https://www.uniprot.org/uniprot/Q56NL1|https://www.uniprot.org/uniprot/Q56H28|https://www.uniprot.org/uniprot/Q2PGE2|https://www.uniprot.org/uniprot/C7ECU1
T30 1120-1124 Protein denotes ACE2 https://www.uniprot.org/uniprot/Q9UFZ6
T31 1281-1294 Protein denotes spike protein https://www.uniprot.org/uniprot/P31340
T32 1456-1469 Protein denotes spike protein https://www.uniprot.org/uniprot/P31340

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T4 48-51 Body_part denotes IgM http://purl.org/sig/ont/fma/fma62873
T5 78-91 Body_part denotes immune system http://purl.org/sig/ont/fma/fma9825
T6 213-226 Body_part denotes myelin sheath http://purl.org/sig/ont/fma/fma62983
T7 241-247 Body_part denotes myelin http://purl.org/sig/ont/fma/fma62977
T8 259-271 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925
T9 448-454 Body_part denotes lysine http://purl.org/sig/ont/fma/fma82758
T10 455-463 Body_part denotes backbone http://purl.org/sig/ont/fma/fma13478
T11 651-654 Body_part denotes IgM http://purl.org/sig/ont/fma/fma62873
T12 679-684 Body_part denotes blood http://purl.org/sig/ont/fma/fma9670
T13 711-724 Body_part denotes immune system http://purl.org/sig/ont/fma/fma9825
T14 832-845 Body_part denotes myelin sheath http://purl.org/sig/ont/fma/fma62983
T15 946-961 Body_part denotes polysaccharides http://purl.org/sig/ont/fma/fma82746
T16 1126-1133 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T17 1216-1231 Body_part denotes polysaccharides http://purl.org/sig/ont/fma/fma82746
T18 1258-1273 Body_part denotes polysaccharides http://purl.org/sig/ont/fma/fma82746
T19 1287-1294 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T20 1355-1367 Body_part denotes Carbohydrate http://purl.org/sig/ont/fma/fma82737
T21 1406-1414 Body_part denotes backbone http://purl.org/sig/ont/fma/fma13478
T22 1462-1469 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T23 1503-1516 Body_part denotes carbohydrates http://purl.org/sig/ont/fma/fma82737
T24 1754-1767 Body_part denotes carbohydrates http://purl.org/sig/ont/fma/fma82737

LitCovid-sample-PD-MAT

Id Subject Object Predicate Lexical cue
T1 679-684 http://purl.obolibrary.org/obo/MAT_0000083 denotes blood
T2 679-684 http://purl.obolibrary.org/obo/MAT_0000315 denotes blood

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T1 1162-1168 http://purl.obolibrary.org/obo/GO_0098657 denotes uptake
T2 1433-1448 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T3 1727-1742 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T3 20-38 Disease denotes neurologic disease http://purl.obolibrary.org/obo/MONDO_0005071
T4 52-73 Disease denotes monoclonal gammopathy http://purl.obolibrary.org/obo/MONDO_0004960
T5 859-869 Disease denotes neuropathy http://purl.obolibrary.org/obo/MONDO_0005244
T6 1021-1029 Disease denotes CoViD‐19 http://purl.obolibrary.org/obo/MONDO_0100096
T7 1250-1257 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T8 1520-1527 Disease denotes COVID19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 1859-1877 Disease denotes neurologic disease http://purl.obolibrary.org/obo/MONDO_0005071

LitCovid-sample-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 859-869 Phenotype denotes neuropathy http://purl.obolibrary.org/obo/HP_0009830

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 859-869 Phenotype denotes neuropathy http://purl.obolibrary.org/obo/HP_0009830

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T1 1162-1168 http://purl.obolibrary.org/obo/GO_0098739 denotes uptake
T2 1162-1168 http://purl.obolibrary.org/obo/GO_0098657 denotes uptake
T3 1433-1448 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T4 1727-1742 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T1 1162-1168 http://purl.obolibrary.org/obo/GO_0098739 denotes uptake
T2 1162-1168 http://purl.obolibrary.org/obo/GO_0098657 denotes uptake
T3 1433-1448 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T4 1727-1742 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T1 138-160 GlycoEpitope denotes Human Natural Killer‐1 http://www.glycoepitope.jp/epitopes/EP0001

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T5 0-8 Sentence denotes Abstract
T6 10-273 Sentence denotes In a rare neurologic disease known as IgM monoclonal gammopathy the immune system targets a sulfated trisaccharide known as the Human Natural Killer‐1 (HNK‐1) epitope that comprises a constituent of the myelin sheath known as MAG (myelin‐associated glycoprotein).
T7 274-725 Sentence denotes This Editorial highlights a study by Aliu and colleagues in the current issue of the Journal of Neurochemistry, in which the investigators constructed a biodegradable poly‐l‐lysine backbone with multiple copies of this sulfated HNK‐1 trisaccharide. This decoy, poly(phenyl disodium 3‐O‐sulfo‐β‐d‐glucopyranuronate)‐(1→3)‐β‐d‐galactopyranoside, known as PPSGG, removed anti‐MAG IgM autoantibodies from the blood, while not activating the immune system.
T8 726-870 Sentence denotes These findings provide a path for the selective removal of a pathogenic set of antibodies that target the myelin sheath resulting in neuropathy.
T9 871-1189 Sentence denotes These findings are applicable to a parallel strategy for the generation of polysaccharides similar to those present in the receptor‐binding domain of CoViD‐19, which might inhibit viral adhesion to its receptor, the angiotensin‐converting enzyme‐2 (ACE2) protein, thereby impairing cellular uptake of the virus itself.
T10 1190-1354 Sentence denotes The deployment of complex polysaccharides that mimic actual COVID19 polysaccharides on the spike protein may also provide a feasible structural basis for a vaccine.
T11 1355-1470 Sentence denotes Carbohydrate mimics, if conjugated to a carrier or backbone, might provoke an immune response to the spike protein.
T12 1471-1701 Sentence denotes A vaccine that targets critical carbohydrates on COVID19, and then neutralizes the virus would recapitulate a successful strategy employed in other microbial vaccines, like the pneumococcal vaccines and the meningococcal vaccines.
T13 1702-1818 Sentence denotes These vaccines direct an immune response to complex carbohydrates and successfully prevent life‐threatening disease.
T14 1819-1939 Sentence denotes This paper provides lessons from a rare neurologic disease that may teach us strategies applicable to a global pandemic.

LitCovid-sample-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T1 138-160 GlycoEpitope denotes Human Natural Killer‐1 http://www.glycoepitope.jp/epitopes/EP0001

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
33 162-167 Gene denotes HNK‐1 Gene:27087
34 236-239 Gene denotes MAG Gene:4099
35 241-271 Gene denotes myelin‐associated glycoprotein Gene:4099
36 502-507 Gene denotes HNK‐1 Gene:27087
37 1087-1118 Gene denotes angiotensin‐converting enzyme‐2 Gene:59272
38 1120-1124 Gene denotes ACE2 Gene:59272
39 1281-1286 Gene denotes spike Gene:43740568
40 1456-1461 Gene denotes spike Gene:43740568
41 647-650 Gene denotes MAG Gene:4099
42 111-124 Chemical denotes trisaccharide MESH:D014312
43 441-454 Chemical denotes poly‐l‐lysine
44 508-521 Chemical denotes trisaccharide MESH:D014312
45 535-616 Chemical denotes poly(phenyl disodium 3‐O‐sulfo‐β‐d‐glucopyranuronate)‐(1→3)‐β‐d‐galactopyranoside
46 627-632 Chemical denotes PPSGG
47 946-961 Chemical denotes polysaccharides MESH:D011134
48 1216-1231 Chemical denotes polysaccharides MESH:D011134
49 1250-1273 Chemical denotes COVID19 polysaccharides
50 1355-1367 Chemical denotes Carbohydrate MESH:D002241
51 1503-1516 Chemical denotes carbohydrates MESH:D002241
52 1754-1767 Chemical denotes carbohydrates MESH:D002241
53 20-38 Disease denotes neurologic disease MESH:D020271
54 859-869 Disease denotes neuropathy MESH:D009422
55 1021-1029 Disease denotes CoViD‐19 MESH:C000657245
56 1520-1527 Disease denotes COVID19 MESH:C000657245
57 1648-1660 Disease denotes pneumococcal MESH:D011008
58 1678-1691 Disease denotes meningococcal MESH:D008589
59 1859-1877 Disease denotes neurologic disease MESH:D020271