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PMC:7205724 / 7216-7826 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
266 58-62 Gene denotes ACE2 Gene:59272
267 138-142 Gene denotes ACE2 Gene:59272
268 17-25 Species denotes SARS-CoV Tax:694009
269 52-57 Species denotes human Tax:9606
270 70-80 Species denotes SARS-CoV 2 Tax:2697049
271 132-137 Species denotes human Tax:9606
272 346-354 Species denotes SARS-CoV Tax:694009
273 596-606 Species denotes SARS-CoV 2 Tax:2697049

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T49 17-25 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T50 70-78 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T51 346-354 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T52 596-604 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T82 52-57 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T83 91-92 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T84 132-137 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T85 246-249 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T65 17-25 Species denotes SARS-CoV NCBItxid:694009
T66 52-57 Species denotes human NCBItxid:9606
T67 70-80 Species denotes SARS-CoV 2 NCBItxid:2697049
T68 132-137 Species denotes human NCBItxid:9606
T69 346-354 Species denotes SARS-CoV NCBItxid:694009
T70 596-606 Species denotes SARS-CoV 2 NCBItxid:2697049

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T66 0-225 Sentence denotes When compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3].
T67 226-610 Sentence denotes Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
268 17-25 Species denotes SARS-CoV Tax:694009
269 52-57 Species denotes human Tax:9606
266 58-62 Gene denotes ACE2 Gene:59272
270 70-80 Species denotes SARS-CoV 2 Tax:2697049
271 132-137 Species denotes human Tax:9606
267 138-142 Gene denotes ACE2 Gene:59272
272 346-354 Species denotes SARS-CoV Tax:694009
273 596-606 Species denotes SARS-CoV 2 Tax:2697049

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T1199 0-4 WRB denotes When
T1200 5-13 VBN denotes compared
T1201 14-16 TO denotes to
T1202 17-25 NNP denotes SARS-CoV
T1203 26-28 NNP denotes SB
T1204 28-29 -COMMA- denotes ,
T1205 30-33 DT denotes the
T1206 34-39 NN denotes motif
T1207 40-47 VBG denotes binding
T1208 48-51 DT denotes the
T1209 52-57 JJ denotes human
T1210 58-62 NN denotes ACE2
T1211 63-65 TO denotes to
T1212 66-69 DT denotes the
T1213 70-78 JJ denotes SARS-CoV
T1214 79-80 CD denotes 2
T1215 81-83 NN denotes SB
T1216 84-90 VBD denotes showed
T1217 91-92 DT denotes a
T1218 93-103 RB denotes relatively
T1219 104-110 JJR denotes higher
T1220 111-118 NN denotes binding
T1221 119-127 NN denotes affinity
T1222 128-131 IN denotes for
T1223 132-137 JJ denotes human
T1224 138-142 NN denotes ACE2
T1225 143-145 IN denotes as
T1226 146-155 VBN denotes indicated
T1227 156-158 IN denotes in
T1228 159-166 JJR denotes smaller
T1229 167-178 NN denotes equilibrium
T1230 179-191 NN denotes dissociation
T1231 192-200 NN denotes constant
T1232 201-202 -LRB- denotes (
T1233 202-208 NN denotes 2.9 nM
T1234 209-212 IN denotes vs.
T1235 213-219 NN denotes 7.7 nM
T1236 219-220 -RRB- denotes )
T1237 221-222 -LRB- denotes [
T1238 222-223 CD denotes 3
T1239 223-224 -RRB- denotes ]
T1240 226-236 JJ denotes Structural
T1241 237-245 NN denotes analysis
T1242 246-249 VBZ denotes has
T1243 250-262 VBN denotes demonstrated
T1244 263-267 IN denotes that
T1245 268-276 CD denotes fourteen
T1246 277-286 NNS denotes positions
T1247 287-297 RB denotes critically
T1248 298-302 VBP denotes take
T1249 303-307 NN denotes part
T1250 308-310 IN denotes in
T1251 311-314 DT denotes the
T1252 315-331 JJ denotes receptor-binding
T1253 332-338 NN denotes domain
T1254 339-341 IN denotes of
T1255 342-345 DT denotes the
T1256 346-354 NN denotes SARS-CoV
T1257 355-357 NN denotes SB
T1258 358-362 WDT denotes that
T1259 363-370 VBP denotes contain
T1260 371-376 CD denotes eight
T1261 377-386 VBN denotes conserved
T1262 387-388 -LRB- denotes (
T1263 388-392 NN denotes T402
T1264 392-393 -COMMA- denotes ,
T1265 394-398 NN denotes Y436
T1266 398-399 -COMMA- denotes ,
T1267 400-404 NN denotes Y440
T1268 404-405 -COMMA- denotes ,
T1269 406-410 NN denotes N473
T1270 410-411 -COMMA- denotes ,
T1271 412-416 NN denotes Y475
T1272 416-417 -COMMA- denotes ,
T1273 418-422 NN denotes T486
T1274 422-423 -COMMA- denotes ,
T1275 424-428 NN denotes G488
T1276 428-429 -COMMA- denotes ,
T1277 430-433 CC denotes and
T1278 434-438 NN denotes Y491
T1279 438-439 -RRB- denotes )
T1280 440-449 NNS denotes positions
T1281 450-453 CC denotes and
T1282 454-457 CD denotes six
T1283 458-472 JJ denotes semi-conserved
T1284 473-474 -LRB- denotes (
T1285 474-478 NN denotes R426
T1286 479-481 TO denotes to
T1287 482-486 NN denotes N448
T1288 486-487 -COMMA- denotes ,
T1289 488-492 NN denotes Y442
T1290 493-495 TO denotes to
T1291 496-500 NN denotes L464
T1292 500-501 -COMMA- denotes ,
T1293 502-506 NN denotes L472
T1294 507-509 TO denotes to
T1295 510-514 NN denotes F495
T1296 514-515 -COMMA- denotes ,
T1297 516-520 NN denotes N479
T1298 521-523 TO denotes to
T1299 524-528 NN denotes Q502
T1300 528-529 -COMMA- denotes ,
T1301 530-534 NN denotes Y484
T1302 535-537 TO denotes to
T1303 538-542 NN denotes Q507
T1304 542-543 -COMMA- denotes ,
T1305 544-547 CC denotes and
T1306 548-552 NN denotes T487
T1307 553-555 TO denotes to
T1308 556-560 NN denotes N510
T1309 560-561 -RRB- denotes )
T1310 562-575 NNS denotes substitutions
T1311 576-580 IN denotes with
T1312 581-588 NN denotes respect
T1313 589-591 TO denotes to
T1314 592-595 DT denotes the
T1315 596-604 JJ denotes SARS-CoV
T1316 605-606 CD denotes 2
T1317 607-609 NN denotes SB
R1203 T1215 T1212 arg1Of SB,the
R1204 T1215 T1213 arg1Of SB,SARS-CoV
R1205 T1215 T1214 arg1Of SB,2
R1206 T1206 T1216 arg1Of motif,showed
R1293 T1301 T1300 arg2Of Y484,","
R1294 T1301 T1302 arg1Of Y484,to
R1295 T1303 T1302 arg2Of Q507,to
R1296 T1305 T1304 arg1Of and,","
R1190 T1216 T1199 arg1Of showed,When
R1191 T1200 T1199 arg2Of compared,When
R1192 T1200 T1201 arg1Of compared,to
R1193 T1203 T1201 arg2Of SB,to
R1194 T1203 T1202 arg1Of SB,SARS-CoV
R1195 T1216 T1204 arg1Of showed,","
R1196 T1206 T1205 arg1Of motif,the
R1197 T1206 T1207 arg1Of motif,binding
R1198 T1210 T1207 arg2Of ACE2,binding
R1199 T1210 T1208 arg1Of ACE2,the
R1200 T1210 T1209 arg1Of ACE2,human
R1201 T1210 T1211 arg1Of ACE2,to
R1202 T1215 T1211 arg2Of SB,to
R1207 T1221 T1216 arg2Of affinity,showed
R1208 T1225 T1216 arg3Of as,showed
R1209 T1221 T1217 arg1Of affinity,a
R1210 T1219 T1218 arg1Of higher,relatively
R1211 T1221 T1219 arg1Of affinity,higher
R1212 T1221 T1220 arg1Of affinity,binding
R1213 T1221 T1222 arg1Of affinity,for
R1214 T1224 T1222 arg2Of ACE2,for
R1215 T1224 T1223 arg1Of ACE2,human
R1216 T1226 T1225 arg2Of indicated,as
R1217 T1226 T1227 arg1Of indicated,in
R1218 T1231 T1227 arg2Of constant,in
R1219 T1231 T1228 arg1Of constant,smaller
R1220 T1231 T1229 arg1Of constant,equilibrium
R1221 T1231 T1230 arg1Of constant,dissociation
R1222 T1231 T1232 arg1Of constant,(
R1223 T1233 T1232 arg2Of 2.9 nM,(
R1224 T1236 T1232 arg3Of ),(
R1225 T1233 T1234 arg1Of 2.9 nM,vs.
R1226 T1235 T1234 arg2Of 7.7 nM,vs.
R1227 T1216 T1237 arg1Of showed,[
R1228 T1238 T1237 arg2Of 3,[
R1229 T1239 T1237 arg3Of ],[
R1230 T1241 T1240 arg1Of analysis,Structural
R1231 T1241 T1242 arg1Of analysis,has
R1232 T1243 T1242 arg2Of demonstrated,has
R1233 T1241 T1243 arg1Of analysis,demonstrated
R1234 T1248 T1243 arg2Of take,demonstrated
R1235 T1248 T1244 arg1Of take,that
R1236 T1246 T1245 arg1Of positions,fourteen
R1237 T1248 T1247 arg1Of take,critically
R1238 T1246 T1248 arg1Of positions,take
R1239 T1249 T1248 arg2Of part,take
R1240 T1248 T1250 arg1Of take,in
R1241 T1253 T1250 arg2Of domain,in
R1242 T1253 T1251 arg1Of domain,the
R1243 T1253 T1252 arg1Of domain,receptor-binding
R1244 T1253 T1254 arg1Of domain,of
R1245 T1257 T1254 arg2Of SB,of
R1246 T1257 T1255 arg1Of SB,the
R1247 T1257 T1256 arg1Of SB,SARS-CoV
R1248 T1257 T1258 arg1Of SB,that
R1249 T1257 T1259 arg1Of SB,contain
R1250 T1281 T1259 arg2Of and,contain
R1251 T1281 T1260 arg1Of and,eight
R1252 T1281 T1261 arg1Of and,conserved
R1253 T1280 T1262 arg1Of positions,(
R1254 T1277 T1262 arg2Of and,(
R1255 T1279 T1262 arg3Of ),(
R1256 T1263 T1264 arg1Of T402,","
R1257 T1265 T1264 arg2Of Y436,","
R1258 T1264 T1266 arg1Of ",",","
R1259 T1267 T1266 arg2Of Y440,","
R1260 T1266 T1268 arg1Of ",",","
R1261 T1269 T1268 arg2Of N473,","
R1262 T1268 T1270 arg1Of ",",","
R1263 T1271 T1270 arg2Of Y475,","
R1264 T1270 T1272 arg1Of ",",","
R1265 T1273 T1272 arg2Of T486,","
R1266 T1272 T1274 arg1Of ",",","
R1267 T1275 T1274 arg2Of G488,","
R1268 T1277 T1276 arg1Of and,","
R1269 T1274 T1277 arg1Of ",",and
R1270 T1278 T1277 arg2Of Y491,and
R1271 T1280 T1281 arg1Of positions,and
R1272 T1310 T1281 arg2Of substitutions,and
R1273 T1283 T1282 arg1Of semi-conserved,six
R1274 T1310 T1283 arg1Of substitutions,semi-conserved
R1275 T1283 T1284 arg1Of semi-conserved,(
R1276 T1296 T1284 arg2Of ",",(
R1277 T1309 T1284 arg3Of ),(
R1278 T1285 T1286 arg1Of R426,to
R1279 T1287 T1286 arg2Of N448,to
R1280 T1287 T1288 arg1Of N448,","
R1281 T1289 T1288 arg2Of Y442,","
R1282 T1289 T1290 arg1Of Y442,to
R1283 T1291 T1290 arg2Of L464,to
R1284 T1287 T1292 arg1Of N448,","
R1285 T1293 T1292 arg2Of L472,","
R1286 T1293 T1294 arg1Of L472,to
R1287 T1295 T1294 arg2Of F495,to
R1288 T1285 T1296 arg1Of R426,","
R1289 T1305 T1296 arg2Of and,","
R1290 T1297 T1298 arg1Of N479,to
R1291 T1299 T1298 arg2Of Q502,to
R1292 T1299 T1300 arg1Of Q502,","
R1297 T1297 T1305 arg1Of N479,and
R1298 T1306 T1305 arg2Of T487,and
R1299 T1305 T1307 arg1Of and,to
R1300 T1308 T1307 arg2Of N510,to
R1301 T1259 T1311 arg1Of contain,with
R1302 T1312 T1311 arg2Of respect,with
R1303 T1317 T1311 arg3Of SB,with
R1304 T1311 T1313 arg1Of with,to
R1305 T1317 T1314 arg1Of SB,the
R1306 T1317 T1315 arg1Of SB,SARS-CoV
R1307 T1317 T1316 arg1Of SB,2

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T48 17-25 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T49 70-80 Disease denotes SARS-CoV 2 http://purl.obolibrary.org/obo/MONDO_0100096
T50 346-354 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T51 596-606 Disease denotes SARS-CoV 2 http://purl.obolibrary.org/obo/MONDO_0100096

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T66 0-225 Sentence denotes When compared to SARS-CoV SB, the motif binding the human ACE2 to the SARS-CoV 2 SB showed a relatively higher binding affinity for human ACE2 as indicated in smaller equilibrium dissociation constant (2.9 nM vs. 7.7 nM) [3].
T67 226-610 Sentence denotes Structural analysis has demonstrated that fourteen positions critically take part in the receptor-binding domain of the SARS-CoV SB that contain eight conserved (T402, Y436, Y440, N473, Y475, T486, G488, and Y491) positions and six semi-conserved (R426 to N448, Y442 to L464, L472 to F495, N479 to Q502, Y484 to Q507, and T487 to N510) substitutions with respect to the SARS-CoV 2 SB.