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PMC:7060195 / 446-1642 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
30 15-37 Species denotes 2019-novel coronavirus Tax:2697049
31 39-49 Species denotes SARS-CoV-2 Tax:2697049
32 475-481 Species denotes people Tax:9606
33 531-536 Species denotes human Tax:9606
34 540-545 Species denotes human Tax:9606
35 794-804 Species denotes SARS-CoV-2 Tax:2697049
36 940-948 Species denotes patients Tax:9606
37 1149-1159 Species denotes SARS-CoV-2 Tax:2697049
38 72-81 Disease denotes pneumonia MESH:D011014
39 83-91 Disease denotes COVID-19 MESH:C000657245
40 391-412 Disease denotes SARS-CoV-2 infections MESH:C000657245
41 487-491 Disease denotes died MESH:D003643
42 503-511 Disease denotes COVID-19 MESH:C000657245
43 669-678 Disease denotes pneumonia MESH:D011014
44 862-867 Disease denotes Fever MESH:D005334
45 869-878 Disease denotes dry cough MESH:D003371
46 884-891 Disease denotes fatigue MESH:D005221
47 924-932 Disease denotes COVID-19 MESH:C000657245
48 954-965 Disease denotes lymphopenia MESH:D008231
49 1119-1132 Disease denotes viral disease MESH:D001102

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T1 1012-1017 Body_part denotes chest http://purl.org/sig/ont/fma/fma9576

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1012-1017 Body_part denotes chest http://purl.obolibrary.org/obo/UBERON_0001443

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T2 72-81 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T3 669-678 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090
T4 862-867 Phenotype denotes Fever http://purl.obolibrary.org/obo/HP_0001945
T5 869-878 Phenotype denotes dry cough http://purl.obolibrary.org/obo/HP_0031246
T6 884-891 Phenotype denotes fatigue http://purl.obolibrary.org/obo/HP_0012378
T7 954-965 Phenotype denotes lymphopenia http://purl.obolibrary.org/obo/HP_0001888

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T6 39-47 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T7 72-81 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T8 83-91 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T9 391-399 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T10 402-412 Disease denotes infections http://purl.obolibrary.org/obo/MONDO_0005550
T11 503-511 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T12 669-678 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T13 794-802 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T14 954-965 Disease denotes lymphopenia http://purl.obolibrary.org/obo/MONDO_0003783
T15 1119-1132 Disease denotes viral disease http://purl.obolibrary.org/obo/MONDO_0005108
T16 1149-1157 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T4 93-96 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T5 140-143 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T6 362-363 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T7 528-536 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes by human
T8 540-545 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T9 564-565 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T10 853-854 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T11 1012-1017 http://www.ebi.ac.uk/efo/EFO_0000965 denotes chest
T12 1104-1105 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T3 1043-1052 Chemical denotes antiviral http://purl.obolibrary.org/obo/CHEBI_22587

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T5 0-187 Sentence denotes An outbreak of 2019-novel coronavirus (SARS-CoV-2) that causes atypical pneumonia (COVID-19) has raged in China since mid-December 2019 and has spread to 26 countries (February 20, 2020).
T6 188-361 Sentence denotes The epidemic was identified by the first four cases confirmed on December 29, 2019 and was traced to the Huanan Seafood Wholesale Market, Wuhan city, Hubei Province, China1.
T7 362-502 Sentence denotes A total of 75,465 cases with SARS-CoV-2 infections have been confirmed up to date (February 20, 2020), and 2,236 people have died in China2.
T8 503-712 Sentence denotes COVID-19 spreads rapidly by human-to-human transmission with a median incubation period of 3.0 days (range, 0 to 24.0), and the time from symptom onset to developing pneumonia is 4.0 days (range, 2.0 to 7.0)3.
T9 713-861 Sentence denotes Respiratory droplets and direct contact are conventional transmission routes for SARS-CoV-2, and fecal-to-oral transmission might also have a role3.
T10 862-934 Sentence denotes Fever, dry cough, and fatigue are common symptoms at onset of COVID-194.
T11 935-1030 Sentence denotes Most patients have lymphopenia and bilateral ground-glass opacity changes on chest CT scans4,5.
T12 1031-1133 Sentence denotes No specific antiviral treatments or vaccines are available because it is a new emerging viral disease.
T13 1134-1196 Sentence denotes Development of SARS-CoV-2-based vaccines is urgently required.