PMC:7049657 / 5115-6160
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 180 | 218-223 | Species | denotes | human | Tax:9606 |
| 181 | 224-239 | Species | denotes | betacoronavirus | Tax:694002 |
| 182 | 261-270 | Species | denotes | 2019-nCoV | Tax:2697049 |
| 183 | 302-312 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 184 | 525-540 | Species | denotes | betacoronavirus | Tax:694002 |
| 185 | 572-582 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 186 | 712-720 | Species | denotes | patients | Tax:9606 |
| 187 | 883-898 | Species | denotes | new coronavirus | Tax:2697049 |
| 188 | 96-105 | Disease | denotes | pneumonia | MESH:D011014 |
| 189 | 347-356 | Disease | denotes | pneumonia | MESH:D011014 |
| 190 | 611-621 | Disease | denotes | infections | MESH:D007239 |
| 191 | 842-850 | Disease | denotes | COVID-19 | MESH:C000657245 |
| 192 | 852-857 | Disease | denotes | death | MESH:D003643 |
| 193 | 930-939 | Disease | denotes | mortality | MESH:D003643 |
| 194 | 960-969 | Disease | denotes | mortality | MESH:D003643 |
| 195 | 1014-1023 | Disease | denotes | mortality | MESH:D003643 |
LitCovid-PMC-OGER-BB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T72 | 218-223 | SP_6;NCBITaxon:9606 | denotes | human |
| T71 | 224-239 | SP_8;NCBITaxon:694002 | denotes | betacoronavirus |
| T70 | 261-270 | SP_7 | denotes | 2019-nCoV |
| T69 | 302-312 | SP_7 | denotes | SARS-CoV-2 |
| T68 | 392-397 | NCBITaxon:10239 | denotes | virus |
| T67 | 398-404 | SO:0001026 | denotes | genome |
| T66 | 525-540 | SP_8;NCBITaxon:694002 | denotes | betacoronavirus |
| T65 | 572-582 | SP_7 | denotes | SARS-CoV-2 |
| T64 | 627-631 | SP_10 | denotes | SARS |
| T63 | 635-639 | SP_9 | denotes | MERS |
| T62 | 842-850 | SP_7 | denotes | COVID-19 |
| T61 | 852-857 | GO:0016265 | denotes | death |
| T60 | 887-898 | NCBITaxon:11118 | denotes | coronavirus |
| T59 | 924-928 | SP_10 | denotes | SARS |
| T58 | 954-958 | SP_9 | denotes | MERS |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T10 | 398-404 | Body_part | denotes | genome | http://purl.org/sig/ont/fma/fma84116 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T38 | 96-105 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T39 | 302-310 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T40 | 302-306 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T41 | 347-356 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T42 | 572-580 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T43 | 572-576 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T44 | 611-621 | Disease | denotes | infections | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T45 | 627-631 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T46 | 842-850 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T47 | 924-928 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T48 | 1009-1012 | Disease | denotes | flu | http://purl.obolibrary.org/obo/MONDO_0005812 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T65 | 54-55 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T66 | 83-84 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T67 | 137-139 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
| T68 | 210-211 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T69 | 218-223 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
| T70 | 390-391 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T71 | 392-397 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T72 | 583-586 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T73 | 647-648 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T74 | 687-688 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T75 | 752-753 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T10 | 96-105 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T11 | 347-356 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T29 | 0-141 | Sentence | denotes | On December 31 of 2019, China revealed that there was a growing number of cases of a mysterious pneumonia in Wuhan City, Hubei Province [11]. |
| T30 | 142-375 | Sentence | denotes | On January 7th 2002, Chinese authorities announced the detection of a novel human betacoronavirus, provisionally named 2019-nCoV by the WHO (and later renamed, SARS-CoV-2) as the agent responsible for the pneumonia outbreak in Wuhan. |
| T31 | 376-546 | Sentence | denotes | By 10 January a virus genome was released [12], and published [13] and multiple other centres soon provided additional laboratory details on the new betacoronavirus [14]. |
| T32 | 547-808 | Sentence | denotes | The on-going outbreak of SARS-CoV-2 has already caused far more infections than SARS or MERS and in a far shorter time, most likely because a significant percent of patients do not become seriously ill in a time-frame that would rapidly lead to their detection. |
| T33 | 809-1045 | Sentence | denotes | Based on the current numbers for COVID-19 (death rate of 2–3 per 100) the new coronavirus appears less deadly than SARS (mortality ~ 1 in 10) or MERS (mortality ~ 3/10), but more deadly than seasonal flu (mortality ~ 0.5 to 1 per 1000). |